RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 VSNL1P62760 191 aa11.9□□□□□ -0.5
CX3CL1-201ENST00000006053 PUM3Q15397 648 aaKnown RBP11.9□□□□□ -0.5
CX3CL1-201ENST00000006053 MUM1L1Q5H9M0 696 aa11.9□□□□□ -0.5
CX3CL1-201ENST00000006053 RRAGBQ5VZM2 374 aa11.9□□□□□ -0.5
CX3CL1-201ENST00000006053 LPIN2Q92539 896 aa11.9□□□□□ -0.5
CX3CL1-201ENST00000006053 NAPGQ99747 312 aaPredicted RBP11.9□□□□□ -0.5
CX3CL1-201ENST00000006053 AATFQ9NY61 560 aaKnown RBP eCLIP11.9□□□□□ -0.5
CX3CL1-201ENST00000006053 TAB2Q9NYJ8 693 aa11.9□□□□□ -0.5
CX3CL1-201ENST00000006053 FAN1Q9Y2M0 1017 aa11.9□□□□□ -0.5
CX3CL1-201ENST00000006053 MYO5AQ9Y4I1 1855 aaKnown RBP11.9□□□□□ -0.51
CX3CL1-201ENST00000006053 POTEB2H3BUK9 544 aa11.89□□□□□ -0.51
CX3CL1-201ENST00000006053 PES1O00541 588 aaKnown RBP11.89□□□□□ -0.51
CX3CL1-201ENST00000006053 WNT7AO00755 349 aa11.89□□□□□ -0.51
CX3CL1-201ENST00000006053 IL2RBP14784 551 aa11.89□□□□□ -0.51
CX3CL1-201ENST00000006053 XBP1P17861 261 aa11.89□□□□□ -0.51
CX3CL1-201ENST00000006053 DPYDQ12882 1025 aa11.89□□□□□ -0.51
CX3CL1-201ENST00000006053 LEKR1Q6ZMV7 388 aa11.89□□□□□ -0.51
CX3CL1-201ENST00000006053 BRINP3Q76B58 766 aa11.89□□□□□ -0.51
CX3CL1-201ENST00000006053 LCMT1Q9UIC8 334 aa11.89□□□□□ -0.51
CX3CL1-201ENST00000006053 IQSEC3Q9UPP2 1182 aaPredicted RBP11.89□□□□□ -0.51
CX3CL1-201ENST00000006053 MAPK8IP1Q9UQF2 711 aa11.89□□□□□ -0.51
CX3CL1-201ENST00000006053 PPP1R3GB7ZBB8 358 aa11.89□□□□□ -0.51
CX3CL1-201ENST00000006053 SMIM22K7EJ46 135 aa11.89□□□□□ -0.51
CX3CL1-201ENST00000006053 TRIM66O15016 1216 aa11.89□□□□□ -0.51
CX3CL1-201ENST00000006053 EIF3JO75822 258 aaKnown RBP11.89□□□□□ -0.51
CX3CL1-201ENST00000006053 STARD3NLO95772 234 aa11.89□□□□□ -0.51
CX3CL1-201ENST00000006053 PBX1P40424 430 aa11.89□□□□□ -0.51
CX3CL1-201ENST00000006053 NOM1Q5C9Z4 860 aaKnown RBP11.89□□□□□ -0.51
CX3CL1-201ENST00000006053 TTF2Q9UNY4 1162 aaKnown RBP11.89□□□□□ -0.51
CX3CL1-201ENST00000006053 V9GY48 417 aaPredicted RBP11.89□□□□□ -0.51
CX3CL1-201ENST00000006053 KCPQ6ZWJ8 1503 aa11.89□□□□□ -0.51
CX3CL1-201ENST00000006053 AKAP11Q9UKA4 1901 aa11.89□□□□□ -0.51
CX3CL1-201ENST00000006053 SLC5A1P13866 664 aa11.89□□□□□ -0.51
CX3CL1-201ENST00000006053 KRT2P35908 639 aa11.89□□□□□ -0.51
CX3CL1-201ENST00000006053 ERVK-24P63145 666 aa11.89□□□□□ -0.51
CX3CL1-201ENST00000006053 KRT31Q15323 416 aa11.89□□□□□ -0.51
CX3CL1-201ENST00000006053 CDKAL1Q5VV42 579 aa11.89□□□□□ -0.51
CX3CL1-201ENST00000006053 NCAPH2Q6IBW4 605 aa11.89□□□□□ -0.51
CX3CL1-201ENST00000006053 GOLGA5Q8TBA6 731 aa11.89□□□□□ -0.51
CX3CL1-201ENST00000006053 SDR42E1Q8WUS8 393 aa11.89□□□□□ -0.51
CX3CL1-201ENST00000006053 STAG1Q8WVM7 1258 aa11.89□□□□□ -0.51
CX3CL1-201ENST00000006053 SHISA4Q96DD7 197 aa11.89□□□□□ -0.51
CX3CL1-201ENST00000006053 LRP2BPQ9P2M1 347 aa11.89□□□□□ -0.51
CX3CL1-201ENST00000006053 DDX60Q8IY21 1712 aaKnown RBP11.88□□□□□ -0.51
CX3CL1-201ENST00000006053 RNF225M0QZC1 329 aaPredicted RBP11.88□□□□□ -0.51
CX3CL1-201ENST00000006053 HSP90B2PQ58FF3 399 aa11.88□□□□□ -0.51
CX3CL1-201ENST00000006053 TMTC2Q8N394 836 aa11.88□□□□□ -0.51
CX3CL1-201ENST00000006053 GUCA1BQ9UMX6 200 aa11.88□□□□□ -0.51
CX3CL1-201ENST00000006053 L1RE1Q9UN81 338 aa11.88□□□□□ -0.51
CX3CL1-201ENST00000006053 TNKSO95271 1327 aa11.88□□□□□ -0.51
CX3CL1-201ENST00000006053 WDR17Q8IZU2 1322 aa11.88□□□□□ -0.51
CX3CL1-201ENST00000006053 KRT9P35527 623 aa11.88□□□□□ -0.51
CX3CL1-201ENST00000006053 ACTN2P35609 894 aa11.88□□□□□ -0.51
CX3CL1-201ENST00000006053 TMTC1Q8IUR5 882 aa11.88□□□□□ -0.51
CX3CL1-201ENST00000006053 NOA1Q8NC60 698 aaKnown RBP11.88□□□□□ -0.51
CX3CL1-201ENST00000006053 MSANTD4Q8NCY6 345 aa11.88□□□□□ -0.51
CX3CL1-201ENST00000006053 HNRNPLLQ8WVV9 542 aaKnown RBP11.88□□□□□ -0.51
CX3CL1-201ENST00000006053 GSDMAQ96QA5 445 aa11.88□□□□□ -0.51
CX3CL1-201ENST00000006053 RAB21Q9UL25 225 aa11.88□□□□□ -0.51
CX3CL1-201ENST00000006053 CDHR2Q9BYE9 1310 aa11.88□□□□□ -0.51
CX3CL1-201ENST00000006053 ALS2Q96Q42 1657 aa11.88□□□□□ -0.51
CX3CL1-201ENST00000006053 ECM29Q5VYK3 1845 aa11.88□□□□□ -0.51
CX3CL1-201ENST00000006053 PDE8AO60658 829 aa11.88□□□□□ -0.51
CX3CL1-201ENST00000006053 BCAMP50895 628 aa11.88□□□□□ -0.51
CX3CL1-201ENST00000006053 CASP8Q14790 479 aa11.88□□□□□ -0.51
CX3CL1-201ENST00000006053 ABHD10Q9NUJ1 306 aa11.88□□□□□ -0.51
CX3CL1-201ENST00000006053 COL18A1P39060 1754 aa11.87□□□□□ -0.51
CX3CL1-201ENST00000006053 MYO1CO00159 1063 aa11.87□□□□□ -0.51
CX3CL1-201ENST00000006053 PLEKHA8P1O95397 391 aa11.87□□□□□ -0.51
CX3CL1-201ENST00000006053 PPARAQ07869 468 aa11.87□□□□□ -0.51
CX3CL1-201ENST00000006053 RNF41Q9H4P4 317 aaPredicted RBP11.87□□□□□ -0.51
CX3CL1-201ENST00000006053 TRIM10Q9UDY6 481 aa11.87□□□□□ -0.51
CX3CL1-201ENST00000006053 ABCF2Q9UG63 623 aa11.87□□□□□ -0.51
CX3CL1-201ENST00000006053 ENC1O14682 589 aa11.87□□□□□ -0.51
CX3CL1-201ENST00000006053 NOP2P46087 812 aaKnown RBP11.87□□□□□ -0.51
CX3CL1-201ENST00000006053 COPB1P53618 953 aaKnown RBP11.87□□□□□ -0.51
CX3CL1-201ENST00000006053 CT47A1Q5JQC4 288 aaPredicted RBP11.87□□□□□ -0.51
CX3CL1-201ENST00000006053 CYP26C1Q6V0L0 522 aa11.87□□□□□ -0.51
CX3CL1-201ENST00000006053 SH3RF1Q7Z6J0 888 aa11.87□□□□□ -0.51
CX3CL1-201ENST00000006053 ANKRD20A12PQ8NF67 263 aa11.87□□□□□ -0.51
CX3CL1-201ENST00000006053 CHP1Q99653 195 aa11.87□□□□□ -0.51
CX3CL1-201ENST00000006053 RNF26Q9BY78 433 aaPredicted RBP11.87□□□□□ -0.51
CX3CL1-201ENST00000006053 PSD3Q9NYI0 1048 aa11.87□□□□□ -0.51
CX3CL1-201ENST00000006053 PKD1L3Q7Z443 1732 aa11.87□□□□□ -0.51
CX3CL1-201ENST00000006053 SPATA31A3Q5VYP0 1347 aa11.87□□□□□ -0.51
CX3CL1-201ENST00000006053 USP5P45974 858 aa11.86□□□□□ -0.51
CX3CL1-201ENST00000006053 PTGDRQ13258 359 aa11.86□□□□□ -0.51
CX3CL1-201ENST00000006053 NKX1-1Q15270 411 aaPredicted RBP11.86□□□□□ -0.51
CX3CL1-201ENST00000006053 TTC38Q5R3I4 469 aa11.86□□□□□ -0.51
CX3CL1-201ENST00000006053 ICE2Q659A1 982 aa11.86□□□□□ -0.51
CX3CL1-201ENST00000006053 TNS3Q68CZ2 1445 aa11.86□□□□□ -0.51
CX3CL1-201ENST00000006053 PIGBQ92521 554 aa11.86□□□□□ -0.51
CX3CL1-201ENST00000006053 CCDC51Q96ER9 411 aa11.86□□□□□ -0.51
CX3CL1-201ENST00000006053 DRC1Q96MC2 740 aa11.86□□□□□ -0.51
CX3CL1-201ENST00000006053 MYO6Q9UM54 1294 aa11.86□□□□□ -0.51
CX3CL1-201ENST00000006053 CYP7A1P22680 504 aa11.86□□□□□ -0.51
CX3CL1-201ENST00000006053 UBXN1Q04323 297 aa11.86□□□□□ -0.51
CX3CL1-201ENST00000006053 TUBB2AQ13885 445 aa11.86□□□□□ -0.51
CX3CL1-201ENST00000006053 PKN1Q16512 942 aa11.86□□□□□ -0.51
CX3CL1-201ENST00000006053 WHAMMP3Q1A5X7 153 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms