RNA–Protein interactions for RNA: ENSMUST00000173369.1

Trim39-205, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

TSL 1 (best) BASIC

Gene Trim39, Length 2,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-205ENSMUST00000173369 Bcorl1A2AQH4 1781 aa9.73□□□□□ -0.85
Trim39-205ENSMUST00000173369 Tspoap1Q7TNF8 1846 aa9.73□□□□□ -0.85
Trim39-205ENSMUST00000173369 A0A1W2P6Q8 802 aa9.73□□□□□ -0.85
Trim39-205ENSMUST00000173369 Gm9048A0A1W2P7H4 802 aa9.73□□□□□ -0.85
Trim39-205ENSMUST00000173369 A0A1W2P7Z8 802 aa9.73□□□□□ -0.85
Trim39-205ENSMUST00000173369 Gm9046A0A1W2P855 802 aa9.73□□□□□ -0.85
Trim39-205ENSMUST00000173369 Armc3A2AU72 881 aa9.73□□□□□ -0.85
Trim39-205ENSMUST00000173369 Mms22lB1AUR6 1238 aa9.73□□□□□ -0.85
Trim39-205ENSMUST00000173369 Me1P06801 572 aa9.73□□□□□ -0.85
Trim39-205ENSMUST00000173369 LtbrP50284 415 aa9.73□□□□□ -0.85
Trim39-205ENSMUST00000173369 Mmp14P53690 582 aa9.73□□□□□ -0.85
Trim39-205ENSMUST00000173369 Evi5P97366 809 aa9.73□□□□□ -0.85
Trim39-205ENSMUST00000173369 Foxn1Q61575 648 aa9.73□□□□□ -0.85
Trim39-205ENSMUST00000173369 Ccdc148Q6P5U8 527 aa9.73□□□□□ -0.85
Trim39-205ENSMUST00000173369 Garem2Q6PAJ3 880 aa9.73□□□□□ -0.85
Trim39-205ENSMUST00000173369 Fsd1Q7TPM6 496 aa9.73□□□□□ -0.85
Trim39-205ENSMUST00000173369 Tnpo1Q8BFY9 898 aaKnown RBP9.73□□□□□ -0.85
Trim39-205ENSMUST00000173369 Rps6kb1Q8BSK8 525 aa9.73□□□□□ -0.85
Trim39-205ENSMUST00000173369 Gpcpd1Q8C0L9 675 aa9.73□□□□□ -0.85
Trim39-205ENSMUST00000173369 Adgra1Q8C4G9 578 aa9.73□□□□□ -0.85
Trim39-205ENSMUST00000173369 Atad2Q8CDM1 1040 aa9.73□□□□□ -0.85
Trim39-205ENSMUST00000173369 Lrrc2Q8VDB8 371 aa9.73□□□□□ -0.85
Trim39-205ENSMUST00000173369 Pcdhb22Q91XZ8 794 aa9.73□□□□□ -0.85
Trim39-205ENSMUST00000173369 Sapcd2Q9D818 391 aa9.73□□□□□ -0.85
Trim39-205ENSMUST00000173369 Hmg20bQ9Z104 317 aa9.73□□□□□ -0.85
Trim39-205ENSMUST00000173369 Med23Q80YQ2 1367 aa9.73□□□□□ -0.85
Trim39-205ENSMUST00000173369 SynrgQ5SV85 1306 aa9.73□□□□□ -0.85
Trim39-205ENSMUST00000173369 Disp2Q8CIP5 1345 aa9.73□□□□□ -0.85
Trim39-205ENSMUST00000173369 Has3O08650 554 aa9.72□□□□□ -0.85
Trim39-205ENSMUST00000173369 Nfil3O08750 462 aa9.72□□□□□ -0.85
Trim39-205ENSMUST00000173369 PtpraP18052 829 aa9.72□□□□□ -0.85
Trim39-205ENSMUST00000173369 CebpaP53566 359 aa9.72□□□□□ -0.85
Trim39-205ENSMUST00000173369 Cnnm2Q3TWN3 875 aa9.72□□□□□ -0.85
Trim39-205ENSMUST00000173369 Snap47Q8R570 413 aa9.72□□□□□ -0.85
Trim39-205ENSMUST00000173369 Ttll1Q91V51 423 aa9.72□□□□□ -0.85
Trim39-205ENSMUST00000173369 Dmrtc1Q9D9R7 182 aa9.72□□□□□ -0.85
Trim39-205ENSMUST00000173369 IkQ9Z1M8 557 aaKnown RBP9.72□□□□□ -0.85
Trim39-205ENSMUST00000173369 XdhQ00519 1335 aa9.72□□□□□ -0.85
Trim39-205ENSMUST00000173369 Palm3A2TJV2 734 aa9.72□□□□□ -0.85
Trim39-205ENSMUST00000173369 Gm44503E9PYU5 387 aa9.72□□□□□ -0.85
Trim39-205ENSMUST00000173369 MyrflQ3UN70 904 aa9.72□□□□□ -0.85
Trim39-205ENSMUST00000173369 Oxr1Q4KMM3 866 aa9.72□□□□□ -0.85
Trim39-205ENSMUST00000173369 Stxbp5lQ5DQR4 1185 aa9.72□□□□□ -0.85
Trim39-205ENSMUST00000173369 Haus6Q6NV99 933 aaKnown RBP9.72□□□□□ -0.85
Trim39-205ENSMUST00000173369 Usp17leQ7M764 540 aa9.72□□□□□ -0.85
Trim39-205ENSMUST00000173369 Lca5lQ8C0X0 741 aa9.72□□□□□ -0.85
Trim39-205ENSMUST00000173369 Ero1bQ8R2E9 467 aa9.72□□□□□ -0.85
Trim39-205ENSMUST00000173369 Dnaaf4Q8R368 420 aa9.72□□□□□ -0.85
Trim39-205ENSMUST00000173369 Gpsm2Q8VDU0 679 aa9.72□□□□□ -0.85
Trim39-205ENSMUST00000173369 Mad2l2Q9D752 211 aa9.72□□□□□ -0.85
Trim39-205ENSMUST00000173369 Kcnb2A6H8H5 907 aa9.72□□□□□ -0.85
Trim39-205ENSMUST00000173369 Rfpl4bJ3QPR6 266 aa9.72□□□□□ -0.85
Trim39-205ENSMUST00000173369 Cyp26a1O55127 497 aa9.72□□□□□ -0.85
Trim39-205ENSMUST00000173369 Cep131Q62036 1060 aa9.72□□□□□ -0.85
Trim39-205ENSMUST00000173369 WaplQ65Z40 1200 aaKnown RBP9.72□□□□□ -0.85
Trim39-205ENSMUST00000173369 Tmem59lQ7TNI2 337 aa9.72□□□□□ -0.85
Trim39-205ENSMUST00000173369 Dlk2Q8K1E3 382 aa9.72□□□□□ -0.85
Trim39-205ENSMUST00000173369 Rufy3Q9D394 469 aa9.72□□□□□ -0.85
Trim39-205ENSMUST00000173369 4921524L21RikQ9D5T2 438 aa9.72□□□□□ -0.85
Trim39-205ENSMUST00000173369 A0A1Y7VML8 143 aa9.71□□□□□ -0.85
Trim39-205ENSMUST00000173369 Skint7A7XV04 395 aa9.71□□□□□ -0.85
Trim39-205ENSMUST00000173369 Flot1O08917 428 aa9.71□□□□□ -0.85
Trim39-205ENSMUST00000173369 Pls1Q3V0K9 630 aa9.71□□□□□ -0.85
Trim39-205ENSMUST00000173369 Sez6lQ6P1D5 963 aa9.71□□□□□ -0.85
Trim39-205ENSMUST00000173369 EngaseQ8BX80 734 aa9.71□□□□□ -0.85
Trim39-205ENSMUST00000173369 Ubac1Q8VDI7 409 aa9.71□□□□□ -0.85
Trim39-205ENSMUST00000173369 Arhgap4B1AUY3 965 aa9.71□□□□□ -0.86
Trim39-205ENSMUST00000173369 Spryd7Q3TFQ1 196 aa9.71□□□□□ -0.86
Trim39-205ENSMUST00000173369 Sfi1Q3UZY0 1216 aaKnown RBP9.71□□□□□ -0.86
Trim39-205ENSMUST00000173369 Slc44a1Q6X893 653 aa9.71□□□□□ -0.86
Trim39-205ENSMUST00000173369 Nxf7Q80SZ6 620 aaKnown RBP9.71□□□□□ -0.86
Trim39-205ENSMUST00000173369 Kdm4aQ8BW72 1064 aa9.71□□□□□ -0.86
Trim39-205ENSMUST00000173369 Rtp1Q8C8C1 263 aa9.71□□□□□ -0.86
Trim39-205ENSMUST00000173369 Alg3Q8K2A8 438 aa9.71□□□□□ -0.86
Trim39-205ENSMUST00000173369 Dppa3Q8QZY3 150 aa9.71□□□□□ -0.86
Trim39-205ENSMUST00000173369 Iffo2Q8R2V2 512 aa9.71□□□□□ -0.86
Trim39-205ENSMUST00000173369 Psma5Q9Z2U1 241 aaKnown RBP9.71□□□□□ -0.86
Trim39-205ENSMUST00000173369 Ankrd35E9Q9D8 996 aa9.7□□□□□ -0.86
Trim39-205ENSMUST00000173369 Exosc10P56960 887 aaKnown RBP9.7□□□□□ -0.86
Trim39-205ENSMUST00000173369 Sec23aQ01405 765 aa9.7□□□□□ -0.86
Trim39-205ENSMUST00000173369 Bco2Q99NF1 532 aa9.7□□□□□ -0.86
Trim39-205ENSMUST00000173369 Ctdnep1Q3TP92 244 aa9.7□□□□□ -0.86
Trim39-205ENSMUST00000173369 Arhgef2Q60875 985 aa9.7□□□□□ -0.86
Trim39-205ENSMUST00000173369 Ints3Q7TPD0 1041 aaKnown RBP9.7□□□□□ -0.86
Trim39-205ENSMUST00000173369 PtmaP26350 111 aa9.69□□□□□ -0.86
Trim39-205ENSMUST00000173369 Sema3eP70275 775 aa9.69□□□□□ -0.86
Trim39-205ENSMUST00000173369 Arl14Q3SXC5 192 aa9.69□□□□□ -0.86
Trim39-205ENSMUST00000173369 Sv2cQ69ZS6 727 aa9.69□□□□□ -0.86
Trim39-205ENSMUST00000173369 Hps6Q8BLY7 805 aa9.69□□□□□ -0.86
Trim39-205ENSMUST00000173369 Scfd2Q8BTY8 684 aa9.69□□□□□ -0.86
Trim39-205ENSMUST00000173369 Yars2Q8BYL4 472 aaKnown RBP9.69□□□□□ -0.86
Trim39-205ENSMUST00000173369 Morc2bQ8C5W4 1022 aa9.69□□□□□ -0.86
Trim39-205ENSMUST00000173369 Ppef2O35385 757 aa9.69□□□□□ -0.86
Trim39-205ENSMUST00000173369 Cyp2b10P12791 500 aa9.69□□□□□ -0.86
Trim39-205ENSMUST00000173369 Stim2P83093 746 aa9.69□□□□□ -0.86
Trim39-205ENSMUST00000173369 Slain1Q68FF7 579 aa9.69□□□□□ -0.86
Trim39-205ENSMUST00000173369 Pgrmc2Q80UU9 217 aaKnown RBP9.69□□□□□ -0.86
Trim39-205ENSMUST00000173369 Scfd1Q8BRF7 639 aaKnown RBP9.69□□□□□ -0.86
Trim39-205ENSMUST00000173369 Triml1Q8BVP1 470 aa9.69□□□□□ -0.86
Trim39-205ENSMUST00000173369 Gimap7Q8R379 293 aa9.69□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 421.8 ms