RNA–Protein interactions for RNA: ENSMUST00000173009.7

Lig3-209, Transcript of DNA ligase 3, mousemouse

TSL 1 (best) BASIC

Gene Lig3, Length 1,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-209ENSMUST00000173009 Traf5P70191 558 aa23.17■■□□□ 1.3
Lig3-209ENSMUST00000173009 Tshz1Q5DTH5 1084 aa23.17■■□□□ 1.3
Lig3-209ENSMUST00000173009 Sp4Q62445 782 aa23.17■■□□□ 1.3
Lig3-209ENSMUST00000173009 Trnp1Q80ZI1 223 aa23.17■■□□□ 1.3
Lig3-209ENSMUST00000173009 Bri3bpQ8BXV2 253 aa23.17■■□□□ 1.3
Lig3-209ENSMUST00000173009 Rbm19Q8R3C6 952 aaKnown RBP23.17■■□□□ 1.3
Lig3-209ENSMUST00000173009 Pus7B7ZNL8 666 aaKnown RBP23.17■■□□□ 1.3
Lig3-209ENSMUST00000173009 VegfbP49766 207 aa23.17■■□□□ 1.3
Lig3-209ENSMUST00000173009 FanccP50652 591 aa23.17■■□□□ 1.3
Lig3-209ENSMUST00000173009 Ckap2Q3V1H1 664 aa23.17■■□□□ 1.3
Lig3-209ENSMUST00000173009 Lca5Q80ST9 704 aa23.17■■□□□ 1.3
Lig3-209ENSMUST00000173009 Ccdc84Q4VA36 332 aaKnown RBP23.16■■□□□ 1.3
Lig3-209ENSMUST00000173009 Dync1li2Q6PDL0 492 aaKnown RBP23.16■■□□□ 1.3
Lig3-209ENSMUST00000173009 Gmcl1Q920G9 524 aa23.16■■□□□ 1.3
Lig3-209ENSMUST00000173009 Tfap4Q9JIZ5 338 aa23.16■■□□□ 1.3
Lig3-209ENSMUST00000173009 Usp14Q9JMA1 493 aaKnown RBP23.16■■□□□ 1.3
Lig3-209ENSMUST00000173009 Col11a1Q61245 1804 aa23.15■■□□□ 1.3
Lig3-209ENSMUST00000173009 Zmynd8A2A484 1235 aaKnown RBP23.15■■□□□ 1.3
Lig3-209ENSMUST00000173009 Lrrc15Q80X72 579 aa23.15■■□□□ 1.3
Lig3-209ENSMUST00000173009 Epha10Q8BYG9 1007 aa23.15■■□□□ 1.3
Lig3-209ENSMUST00000173009 Syne4Q8CII8 388 aa23.15■■□□□ 1.3
Lig3-209ENSMUST00000173009 Ubac1Q8VDI7 409 aa23.15■■□□□ 1.3
Lig3-209ENSMUST00000173009 Mettl16Q9CQG2 553 aaKnown RBP23.15■■□□□ 1.3
Lig3-209ENSMUST00000173009 Pdcd6ipQ9WU78 869 aaKnown RBP23.15■■□□□ 1.3
Lig3-209ENSMUST00000173009 A0A1Y7VML8 143 aa23.14■■□□□ 1.3
Lig3-209ENSMUST00000173009 Armc3A2AU72 881 aa23.14■■□□□ 1.3
Lig3-209ENSMUST00000173009 DaxxO35613 739 aa23.14■■□□□ 1.3
Lig3-209ENSMUST00000173009 Triml1Q8BVP1 470 aa23.14■■□□□ 1.3
Lig3-209ENSMUST00000173009 Rtn1Q8K0T0 780 aa23.14■■□□□ 1.3
Lig3-209ENSMUST00000173009 Bst2Q8R2Q8 172 aa23.14■■□□□ 1.3
Lig3-209ENSMUST00000173009 Btbd19S4R1I0 287 aa23.14■■□□□ 1.3
Lig3-209ENSMUST00000173009 Gm20425E9Q035 978 aaKnown RBP23.14■■□□□ 1.29
Lig3-209ENSMUST00000173009 SrprbP47758 269 aa23.14■■□□□ 1.29
Lig3-209ENSMUST00000173009 Spryd7Q3TFQ1 196 aa23.14■■□□□ 1.29
Lig3-209ENSMUST00000173009 Ddx19aQ61655 478 aaKnown RBP23.14■■□□□ 1.29
Lig3-209ENSMUST00000173009 Dicer1Q8R418 1916 aa23.13■■□□□ 1.29
Lig3-209ENSMUST00000173009 Terf2O35144 541 aa23.13■■□□□ 1.29
Lig3-209ENSMUST00000173009 Ppef2O35385 757 aa23.13■■□□□ 1.29
Lig3-209ENSMUST00000173009 Cep63Q3UPP8 700 aa23.13■■□□□ 1.29
Lig3-209ENSMUST00000173009 Ppp2r5bQ6PD28 497 aa23.13■■□□□ 1.29
Lig3-209ENSMUST00000173009 Kif1bpQ6ZPU9 617 aa23.13■■□□□ 1.29
Lig3-209ENSMUST00000173009 Kiaa1524Q8BWY9 907 aa23.13■■□□□ 1.29
Lig3-209ENSMUST00000173009 CerkQ8K4Q7 531 aa23.13■■□□□ 1.29
Lig3-209ENSMUST00000173009 Rcan1Q9JHG6 198 aa23.13■■□□□ 1.29
Lig3-209ENSMUST00000173009 Nfil3O08750 462 aa23.12■■□□□ 1.29
Lig3-209ENSMUST00000173009 Ccnd3P30282 292 aa23.12■■□□□ 1.29
Lig3-209ENSMUST00000173009 Armc2Q3URY6 854 aa23.12■■□□□ 1.29
Lig3-209ENSMUST00000173009 Stxbp5lQ5DQR4 1185 aa23.12■■□□□ 1.29
Lig3-209ENSMUST00000173009 Tbc1d5Q80XQ2 815 aa23.12■■□□□ 1.29
Lig3-209ENSMUST00000173009 Myh7bA2AQP0 1941 aa23.12■■□□□ 1.29
Lig3-209ENSMUST00000173009 Eef2kO08796 724 aa23.12■■□□□ 1.29
Lig3-209ENSMUST00000173009 GnaqP21279 359 aa23.12■■□□□ 1.29
Lig3-209ENSMUST00000173009 Foxp1P58462 705 aa23.12■■□□□ 1.29
Lig3-209ENSMUST00000173009 Lilrb3P97484 841 aa23.12■■□□□ 1.29
Lig3-209ENSMUST00000173009 Nsrp1Q5NCR9 542 aa23.12■■□□□ 1.29
Lig3-209ENSMUST00000173009 Fbxo28Q8BIG4 368 aa23.12■■□□□ 1.29
Lig3-209ENSMUST00000173009 Ranbp6Q8BIV3 1105 aa23.12■■□□□ 1.29
Lig3-209ENSMUST00000173009 Lrrc2Q8VDB8 371 aa23.12■■□□□ 1.29
Lig3-209ENSMUST00000173009 Srgap1Q91Z69 1062 aa23.12■■□□□ 1.29
Lig3-209ENSMUST00000173009 Myo19Q5SV80 963 aa23.11■■□□□ 1.29
Lig3-209ENSMUST00000173009 Clca4aQ6Q473 924 aa23.11■■□□□ 1.29
Lig3-209ENSMUST00000173009 Tdrd3Q91W18 743 aaKnown RBP23.11■■□□□ 1.29
Lig3-209ENSMUST00000173009 FlgP11088 336 aa23.1■■□□□ 1.29
Lig3-209ENSMUST00000173009 Cplx2P84086 134 aa23.1■■□□□ 1.29
Lig3-209ENSMUST00000173009 BC048507Q80ZS7 89 aa23.1■■□□□ 1.29
Lig3-209ENSMUST00000173009 BaatQ91X34 420 aa23.1■■□□□ 1.29
Lig3-209ENSMUST00000173009 Cep89Q9CZX2 791 aa23.1■■□□□ 1.29
Lig3-209ENSMUST00000173009 Fsip1Q9D3V5 435 aa23.1■■□□□ 1.29
Lig3-209ENSMUST00000173009 Sapcd2Q9D818 391 aa23.1■■□□□ 1.29
Lig3-209ENSMUST00000173009 Tph1P17532 447 aa23.09■■□□□ 1.29
Lig3-209ENSMUST00000173009 Snap25P60879 206 aa23.09■■□□□ 1.29
Lig3-209ENSMUST00000173009 Fam83hQ148V8 1209 aa23.09■■□□□ 1.29
Lig3-209ENSMUST00000173009 Pls1Q3V0K9 630 aa23.09■■□□□ 1.29
Lig3-209ENSMUST00000173009 Pspc1Q8R326 523 aaKnown RBP23.09■■□□□ 1.29
Lig3-209ENSMUST00000173009 Vta1Q9CR26 309 aa23.09■■□□□ 1.29
Lig3-209ENSMUST00000173009 Gpaa1Q9WTK3 621 aa23.09■■□□□ 1.29
Lig3-209ENSMUST00000173009 Bub1bQ9Z1S0 1052 aa23.09■■□□□ 1.29
Lig3-209ENSMUST00000173009 Myh8P13542 1937 aa23.09■■□□□ 1.29
Lig3-209ENSMUST00000173009 Mx1P09922 631 aa23.09■■□□□ 1.29
Lig3-209ENSMUST00000173009 Mboat4P0C7A3 435 aa23.09■■□□□ 1.29
Lig3-209ENSMUST00000173009 Pou3f3P31361 497 aa23.09■■□□□ 1.29
Lig3-209ENSMUST00000173009 Limch1Q3UH68 1057 aa23.09■■□□□ 1.29
Lig3-209ENSMUST00000173009 Babam1Q3UI43 333 aa23.09■■□□□ 1.29
Lig3-209ENSMUST00000173009 Stxbp3Q60770 592 aa23.09■■□□□ 1.29
Lig3-209ENSMUST00000173009 Grm4Q68EF4 912 aa23.09■■□□□ 1.29
Lig3-209ENSMUST00000173009 Armc6Q8BNU0 468 aa23.09■■□□□ 1.29
Lig3-209ENSMUST00000173009 Smc3Q9CW03 1217 aaKnown RBP23.09■■□□□ 1.29
Lig3-209ENSMUST00000173009 4921524L21RikQ9D5T2 438 aa23.09■■□□□ 1.29
Lig3-209ENSMUST00000173009 LdhbP16125 334 aaKnown RBP23.08■■□□□ 1.29
Lig3-209ENSMUST00000173009 OatP29758 439 aa23.08■■□□□ 1.29
Lig3-209ENSMUST00000173009 Atp13a3Q5XF89 1219 aa23.08■■□□□ 1.29
Lig3-209ENSMUST00000173009 Vgll2Q8BGW8 322 aa23.08■■□□□ 1.29
Lig3-209ENSMUST00000173009 Plcd3Q8K2J0 785 aa23.08■■□□□ 1.29
Lig3-209ENSMUST00000173009 Lzts2Q91YU6 671 aa23.08■■□□□ 1.29
Lig3-209ENSMUST00000173009 Inpp4aQ9EPW0 939 aa23.08■■□□□ 1.29
Lig3-209ENSMUST00000173009 Ccdc88aQ5SNZ0 1873 aa23.07■■□□□ 1.28
Lig3-209ENSMUST00000173009 Catsper2A2ARP9 588 aa23.07■■□□□ 1.28
Lig3-209ENSMUST00000173009 Skint3A7TZF0 458 aa23.07■■□□□ 1.28
Lig3-209ENSMUST00000173009 Zbtb21E9Q444 1094 aa23.07■■□□□ 1.28
Lig3-209ENSMUST00000173009 Rfpl4bJ3QPR6 266 aa23.07■■□□□ 1.28
Retrieved 100 of 22,080 RNA–protein pairs in 137.6 ms