RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 Hnrnpul1Q8VDM6 859 aaKnown RBP7.07□□□□□ -1.28
Lig4-202ENSMUST00000170033 Znf568E9PYI1 671 aa7.07□□□□□ -1.28
Lig4-202ENSMUST00000170033 Lmnb1P14733 588 aaKnown RBP7.07□□□□□ -1.28
Lig4-202ENSMUST00000170033 Rad23bP54728 416 aa7.07□□□□□ -1.28
Lig4-202ENSMUST00000170033 Ttll12Q3UDE2 639 aa7.07□□□□□ -1.28
Lig4-202ENSMUST00000170033 Ddx17Q501J6 650 aaKnown RBP7.07□□□□□ -1.28
Lig4-202ENSMUST00000170033 Klhl23Q6GQU2 558 aa7.07□□□□□ -1.28
Lig4-202ENSMUST00000170033 Polr3gQ6NXY9 223 aa7.07□□□□□ -1.28
Lig4-202ENSMUST00000170033 Cep120Q7TSG1 988 aa7.07□□□□□ -1.28
Lig4-202ENSMUST00000170033 Cep128Q8BI22 1102 aa7.07□□□□□ -1.28
Lig4-202ENSMUST00000170033 Lmod1Q8BVA4 595 aa7.07□□□□□ -1.28
Lig4-202ENSMUST00000170033 Phldb2Q8K1N2 1249 aa7.07□□□□□ -1.28
Lig4-202ENSMUST00000170033 Thoc1Q8R3N6 657 aaKnown RBP7.07□□□□□ -1.28
Lig4-202ENSMUST00000170033 Hexim1Q8R409 356 aaKnown RBP7.07□□□□□ -1.28
Lig4-202ENSMUST00000170033 Emilin1Q99K41 1017 aa7.07□□□□□ -1.28
Lig4-202ENSMUST00000170033 Saal1Q9D2C2 474 aa7.07□□□□□ -1.28
Lig4-202ENSMUST00000170033 Ybx3Q9JKB3 361 aaKnown RBP7.07□□□□□ -1.28
Lig4-202ENSMUST00000170033 Gm11983V9GXS8 105 aa7.07□□□□□ -1.28
Lig4-202ENSMUST00000170033 GakQ99KY4 1305 aa7.06□□□□□ -1.28
Lig4-202ENSMUST00000170033 A0A1W2P7S8 802 aa7.06□□□□□ -1.28
Lig4-202ENSMUST00000170033 Ccdc85cE9Q6B2 420 aa7.06□□□□□ -1.28
Lig4-202ENSMUST00000170033 Dnm1P39053 867 aa7.06□□□□□ -1.28
Lig4-202ENSMUST00000170033 Gas1Q01721 343 aa7.06□□□□□ -1.28
Lig4-202ENSMUST00000170033 Cyp7b1Q60991 507 aa7.06□□□□□ -1.28
Lig4-202ENSMUST00000170033 Agtpbp1Q641K1 1218 aa7.06□□□□□ -1.28
Lig4-202ENSMUST00000170033 Cdc5lQ6A068 802 aaKnown RBP7.06□□□□□ -1.28
Lig4-202ENSMUST00000170033 Ltv1Q6NSQ7 470 aaKnown RBP7.06□□□□□ -1.28
Lig4-202ENSMUST00000170033 Spag5Q7TME2 1165 aa7.06□□□□□ -1.28
Lig4-202ENSMUST00000170033 Pif1Q80SX8 650 aa7.06□□□□□ -1.28
Lig4-202ENSMUST00000170033 Ranbp6Q8BIV3 1105 aa7.06□□□□□ -1.28
Lig4-202ENSMUST00000170033 Zbtb1Q91VL9 713 aa7.06□□□□□ -1.28
Lig4-202ENSMUST00000170033 Pex14Q9R0A0 376 aa7.06□□□□□ -1.28
Lig4-202ENSMUST00000170033 Stk39Q9Z1W9 556 aa7.06□□□□□ -1.28
Lig4-202ENSMUST00000170033 Tuft1O08970 390 aa7.06□□□□□ -1.28
Lig4-202ENSMUST00000170033 GnaqP21279 359 aa7.06□□□□□ -1.28
Lig4-202ENSMUST00000170033 EmbP21995 330 aa7.06□□□□□ -1.28
Lig4-202ENSMUST00000170033 Ano9P86044 747 aa7.06□□□□□ -1.28
Lig4-202ENSMUST00000170033 Specc1lQ2KN98 1118 aaKnown RBP7.06□□□□□ -1.28
Lig4-202ENSMUST00000170033 Lrrc43Q3V0L5 667 aa7.06□□□□□ -1.28
Lig4-202ENSMUST00000170033 Hand2Q61039 217 aa7.06□□□□□ -1.28
Lig4-202ENSMUST00000170033 Tas2r124Q7M718 309 aa7.06□□□□□ -1.28
Lig4-202ENSMUST00000170033 Eaf2Q91ZD6 262 aa7.06□□□□□ -1.28
Lig4-202ENSMUST00000170033 Vmp1Q99KU0 406 aa7.06□□□□□ -1.28
Lig4-202ENSMUST00000170033 Zcrb1Q9CZ96 217 aaKnown RBP7.06□□□□□ -1.28
Lig4-202ENSMUST00000170033 Abhd2Q9QXM0 425 aa7.06□□□□□ -1.28
Lig4-202ENSMUST00000170033 VirmaA2AIV2 1811 aaKnown RBP7.06□□□□□ -1.28
Lig4-202ENSMUST00000170033 Btn2a2A4QPC6 514 aa7.05□□□□□ -1.28
Lig4-202ENSMUST00000170033 Pip4k2aO70172 405 aa7.05□□□□□ -1.28
Lig4-202ENSMUST00000170033 H2afxP27661 143 aaKnown RBP7.05□□□□□ -1.28
Lig4-202ENSMUST00000170033 Stat5bP42232 786 aa7.05□□□□□ -1.28
Lig4-202ENSMUST00000170033 Atp8b1Q148W0 1251 aa7.05□□□□□ -1.28
Lig4-202ENSMUST00000170033 Slc27a1Q60714 646 aa7.05□□□□□ -1.28
Lig4-202ENSMUST00000170033 Tbc1d1Q60949 1255 aa7.05□□□□□ -1.28
Lig4-202ENSMUST00000170033 Ms4a5Q810P8 197 aa7.05□□□□□ -1.28
Lig4-202ENSMUST00000170033 Terb1Q8C0V1 768 aa7.05□□□□□ -1.28
Lig4-202ENSMUST00000170033 Trim29Q8R2Q0 587 aa7.05□□□□□ -1.28
Lig4-202ENSMUST00000170033 Tmem143Q8VD26 458 aa7.05□□□□□ -1.28
Lig4-202ENSMUST00000170033 Lzts2Q91YU6 671 aa7.05□□□□□ -1.28
Lig4-202ENSMUST00000170033 Nup188Q6ZQH8 1759 aa7.05□□□□□ -1.28
Lig4-202ENSMUST00000170033 Frmpd4A2AFR3 1320 aa7.05□□□□□ -1.28
Lig4-202ENSMUST00000170033 Api5O35841 504 aaKnown RBP7.05□□□□□ -1.28
Lig4-202ENSMUST00000170033 Slc4a4O88343 1079 aa7.05□□□□□ -1.28
Lig4-202ENSMUST00000170033 Znf697Q569E7 569 aa7.05□□□□□ -1.28
Lig4-202ENSMUST00000170033 Usp13Q5BKP2 858 aa7.05□□□□□ -1.28
Lig4-202ENSMUST00000170033 Hdac4Q6NZM9 1076 aa7.05□□□□□ -1.28
Lig4-202ENSMUST00000170033 DymQ8CHY3 669 aa7.05□□□□□ -1.28
Lig4-202ENSMUST00000170033 UvssaQ9D479 717 aa7.05□□□□□ -1.28
Lig4-202ENSMUST00000170033 Nap1l5Q9JJF0 156 aa7.05□□□□□ -1.28
Lig4-202ENSMUST00000170033 Akap17bA2A3V1 959 aa7.05□□□□□ -1.28
Lig4-202ENSMUST00000170033 Tex13cD3YU32 604 aa7.05□□□□□ -1.28
Lig4-202ENSMUST00000170033 1700029H14RikE9PY36 240 aa7.05□□□□□ -1.28
Lig4-202ENSMUST00000170033 Gm5624F6ZZG8 207 aa7.05□□□□□ -1.28
Lig4-202ENSMUST00000170033 PnnO35691 725 aaKnown RBP7.05□□□□□ -1.28
Lig4-202ENSMUST00000170033 Pde11aP0C1Q2 933 aa7.05□□□□□ -1.28
Lig4-202ENSMUST00000170033 Adssl1P28650 457 aa7.05□□□□□ -1.28
Lig4-202ENSMUST00000170033 Sstr3P30935 428 aa7.05□□□□□ -1.28
Lig4-202ENSMUST00000170033 Nat1P50294 290 aa7.05□□□□□ -1.28
Lig4-202ENSMUST00000170033 Cdr2P97817 455 aa7.05□□□□□ -1.28
Lig4-202ENSMUST00000170033 Snai1Q02085 264 aa7.05□□□□□ -1.28
Lig4-202ENSMUST00000170033 Nt5c2Q3V1L4 560 aa7.05□□□□□ -1.28
Lig4-202ENSMUST00000170033 Kif22Q3V300 660 aa7.05□□□□□ -1.28
Lig4-202ENSMUST00000170033 Ehmt1Q5DW34 1296 aa7.05□□□□□ -1.28
Lig4-202ENSMUST00000170033 Gm11487Q5RIS0 354 aa7.05□□□□□ -1.28
Lig4-202ENSMUST00000170033 Acbd5Q5XG73 508 aa7.05□□□□□ -1.28
Lig4-202ENSMUST00000170033 Slf2Q6P9P0 1278 aa7.05□□□□□ -1.28
Lig4-202ENSMUST00000170033 Pip5kl1Q6U7H8 395 aa7.05□□□□□ -1.28
Lig4-202ENSMUST00000170033 Galnt17Q7TT15 598 aa7.05□□□□□ -1.28
Lig4-202ENSMUST00000170033 Ube3cQ80U95 1083 aa7.05□□□□□ -1.28
Lig4-202ENSMUST00000170033 Haus7Q8BKT8 364 aa7.05□□□□□ -1.28
Lig4-202ENSMUST00000170033 Drd5Q8BLD9 478 aa7.05□□□□□ -1.28
Lig4-202ENSMUST00000170033 Spata16Q8C636 571 aa7.05□□□□□ -1.28
Lig4-202ENSMUST00000170033 Fermt2Q8CIB5 680 aa7.05□□□□□ -1.28
Lig4-202ENSMUST00000170033 Hps3Q91VB4 1002 aa7.05□□□□□ -1.28
Lig4-202ENSMUST00000170033 Lonp2Q9DBN5 852 aa7.05□□□□□ -1.28
Lig4-202ENSMUST00000170033 Chd5A2A8L1 1946 aa7.04□□□□□ -1.28
Lig4-202ENSMUST00000170033 Atp8b5A3FIN4 1183 aa7.04□□□□□ -1.28
Lig4-202ENSMUST00000170033 JundP15066 341 aa7.04□□□□□ -1.28
Lig4-202ENSMUST00000170033 Pola2P33611 600 aa7.04□□□□□ -1.28
Lig4-202ENSMUST00000170033 Phactr1Q2M3X8 580 aa7.04□□□□□ -1.28
Lig4-202ENSMUST00000170033 Prpf4bQ61136 1007 aaKnown RBP7.04□□□□□ -1.28
Retrieved 100 of 22,080 RNA–protein pairs in 38.9 ms