RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Abcb6Q9DC29 842 aa20.79■□□□□ 0.92
Trim47-202ENSMUST00000106441 Klf15Q9EPW2 415 aa20.79■□□□□ 0.92
Trim47-202ENSMUST00000106441 Uri1Q3TLD5 531 aa20.78■□□□□ 0.92
Trim47-202ENSMUST00000106441 AsnsQ61024 561 aa20.78■□□□□ 0.92
Trim47-202ENSMUST00000106441 Enox1Q8BHR2 643 aaKnown RBP20.78■□□□□ 0.92
Trim47-202ENSMUST00000106441 Pnpla2Q8BJ56 486 aa20.78■□□□□ 0.92
Trim47-202ENSMUST00000106441 ParnQ8VDG3 624 aa20.78■□□□□ 0.92
Trim47-202ENSMUST00000106441 Krt23Q99PS0 422 aa20.78■□□□□ 0.92
Trim47-202ENSMUST00000106441 Tomm22Q9CPQ3 142 aa20.78■□□□□ 0.92
Trim47-202ENSMUST00000106441 Cxcl11Q9JHH5 100 aa20.78■□□□□ 0.92
Trim47-202ENSMUST00000106441 Zranb2Q9R020 330 aaKnown RBP20.78■□□□□ 0.92
Trim47-202ENSMUST00000106441 Magi2Q9WVQ1 1275 aa20.78■□□□□ 0.92
Trim47-202ENSMUST00000106441 Frmd7A2AD83 703 aa20.78■□□□□ 0.92
Trim47-202ENSMUST00000106441 Glt1d1A4FUP9 346 aa20.78■□□□□ 0.92
Trim47-202ENSMUST00000106441 Tpm3-rs7D3Z2H9 248 aa20.78■□□□□ 0.92
Trim47-202ENSMUST00000106441 Gpr162Q3UN16 588 aa20.78■□□□□ 0.92
Trim47-202ENSMUST00000106441 Agtpbp1Q641K1 1218 aa20.78■□□□□ 0.92
Trim47-202ENSMUST00000106441 Ppp2r2cQ8BG02 447 aa20.78■□□□□ 0.92
Trim47-202ENSMUST00000106441 Rtn1Q8K0T0 780 aa20.78■□□□□ 0.92
Trim47-202ENSMUST00000106441 Tspyl4Q8VD63 406 aa20.78■□□□□ 0.92
Trim47-202ENSMUST00000106441 Tubgcp2Q921G8 905 aa20.78■□□□□ 0.92
Trim47-202ENSMUST00000106441 Myh2G3UW82 1942 aa20.77■□□□□ 0.92
Trim47-202ENSMUST00000106441 Calcoco2A2A6M5 331 aa20.77■□□□□ 0.92
Trim47-202ENSMUST00000106441 Acad12D3Z7X0 555 aa20.77■□□□□ 0.92
Trim47-202ENSMUST00000106441 Psmd14O35593 310 aa20.77■□□□□ 0.92
Trim47-202ENSMUST00000106441 Gnat2P50149 354 aa20.77■□□□□ 0.92
Trim47-202ENSMUST00000106441 Large2Q5XPT3 690 aa20.77■□□□□ 0.92
Trim47-202ENSMUST00000106441 Znf653Q6YND2 615 aa20.77■□□□□ 0.92
Trim47-202ENSMUST00000106441 Olfr119Q7TRJ5 321 aa20.77■□□□□ 0.92
Trim47-202ENSMUST00000106441 9230110C19RikQ8CC70 267 aa20.77■□□□□ 0.92
Trim47-202ENSMUST00000106441 Vps18Q8R307 973 aa20.77■□□□□ 0.92
Trim47-202ENSMUST00000106441 Pcdhb5Q91XZ5 792 aa20.77■□□□□ 0.92
Trim47-202ENSMUST00000106441 Tbc1d8bA3KGB4 1114 aa20.76■□□□□ 0.91
Trim47-202ENSMUST00000106441 CfhP06909 1234 aa20.76■□□□□ 0.91
Trim47-202ENSMUST00000106441 Tdo2P48776 406 aa20.76■□□□□ 0.91
Trim47-202ENSMUST00000106441 Tor1aip2Q8BYU6 502 aa20.76■□□□□ 0.91
Trim47-202ENSMUST00000106441 Cnpy3Q9DAU1 276 aa20.76■□□□□ 0.91
Trim47-202ENSMUST00000106441 Baiap2l1Q9DBJ3 514 aa20.76■□□□□ 0.91
Trim47-202ENSMUST00000106441 Megf6Q80V70 1572 aa20.76■□□□□ 0.91
Trim47-202ENSMUST00000106441 Col1a1P11087 1453 aa20.76■□□□□ 0.91
Trim47-202ENSMUST00000106441 Zfp646Q6NV66 1788 aa20.75■□□□□ 0.91
Trim47-202ENSMUST00000106441 Cdc27A2A6Q5 825 aa20.75■□□□□ 0.91
Trim47-202ENSMUST00000106441 CrcpO35427 148 aa20.75■□□□□ 0.91
Trim47-202ENSMUST00000106441 Cyp7b1Q60991 507 aa20.75■□□□□ 0.91
Trim47-202ENSMUST00000106441 Myl10Q62082 202 aa20.75■□□□□ 0.91
Trim47-202ENSMUST00000106441 Krt39Q6IFX4 482 aa20.75■□□□□ 0.91
Trim47-202ENSMUST00000106441 Maats1Q8BRC6 783 aa20.75■□□□□ 0.91
Trim47-202ENSMUST00000106441 Tada3Q8R0L9 432 aa20.75■□□□□ 0.91
Trim47-202ENSMUST00000106441 Ces1dQ8VCT4 565 aa20.75■□□□□ 0.91
Trim47-202ENSMUST00000106441 Sgip1Q8VD37 806 aa20.75■□□□□ 0.91
Trim47-202ENSMUST00000106441 Rbm43Q99J64 343 aa20.75■□□□□ 0.91
Trim47-202ENSMUST00000106441 Diaph1O08808 1255 aa20.75■□□□□ 0.91
Trim47-202ENSMUST00000106441 Cd3dP04235 173 aa20.75■□□□□ 0.91
Trim47-202ENSMUST00000106441 Gm2163Q6PCY5 473 aa20.75■□□□□ 0.91
Trim47-202ENSMUST00000106441 Ankk1Q8BZ25 745 aa20.75■□□□□ 0.91
Trim47-202ENSMUST00000106441 Nat10Q8K224 1024 aaKnown RBP20.75■□□□□ 0.91
Trim47-202ENSMUST00000106441 Cbx6Q9DBY5 414 aa20.75■□□□□ 0.91
Trim47-202ENSMUST00000106441 WtapQ9ER69 396 aa20.75■□□□□ 0.91
Trim47-202ENSMUST00000106441 Myh6Q02566 1938 aaKnown RBP20.75■□□□□ 0.91
Trim47-202ENSMUST00000106441 Adgra3Q7TT36 1310 aa20.74■□□□□ 0.91
Trim47-202ENSMUST00000106441 Pet2A2AHY8 747 aa20.74■□□□□ 0.91
Trim47-202ENSMUST00000106441 Dnajc25A2ALW5 357 aa20.74■□□□□ 0.91
Trim47-202ENSMUST00000106441 Dynll1P63168 89 aa20.74■□□□□ 0.91
Trim47-202ENSMUST00000106441 Map9Q3TRR0 646 aa20.74■□□□□ 0.91
Trim47-202ENSMUST00000106441 Znf532Q6NXK2 1036 aa20.74■□□□□ 0.91
Trim47-202ENSMUST00000106441 Ccdc93Q7TQK5 629 aa20.74■□□□□ 0.91
Trim47-202ENSMUST00000106441 Prdm4Q80V63 803 aa20.74■□□□□ 0.91
Trim47-202ENSMUST00000106441 Zmynd15Q8C0R7 736 aa20.74■□□□□ 0.91
Trim47-202ENSMUST00000106441 Cd209bQ8CJ91 325 aa20.74■□□□□ 0.91
Trim47-202ENSMUST00000106441 Epb41l3Q9WV92 929 aa20.74■□□□□ 0.91
Trim47-202ENSMUST00000106441 Rbm6S4R1W5 1118 aaKnown RBP20.74■□□□□ 0.91
Trim47-202ENSMUST00000106441 Gabpb2P81069 414 aa20.73■□□□□ 0.91
Trim47-202ENSMUST00000106441 Pde5aQ8CG03 865 aa20.73■□□□□ 0.91
Trim47-202ENSMUST00000106441 Polr2dQ9D7M8 142 aaKnown RBP20.73■□□□□ 0.91
Trim47-202ENSMUST00000106441 Adam7O35227 789 aa20.73■□□□□ 0.91
Trim47-202ENSMUST00000106441 Pla2g4bP0C871 782 aa20.73■□□□□ 0.91
Trim47-202ENSMUST00000106441 Esyt2Q3TZZ7 845 aa20.73■□□□□ 0.91
Trim47-202ENSMUST00000106441 Rnf41Q8BH75 317 aa20.73■□□□□ 0.91
Trim47-202ENSMUST00000106441 Vps53Q8CCB4 832 aa20.73■□□□□ 0.91
Trim47-202ENSMUST00000106441 Arl8aQ8VEH3 186 aa20.73■□□□□ 0.91
Trim47-202ENSMUST00000106441 Suclg2Q9Z2I8 433 aa20.73■□□□□ 0.91
Trim47-202ENSMUST00000106441 Eif6O55135 245 aa20.72■□□□□ 0.91
Trim47-202ENSMUST00000106441 Zc3h15Q3TIV5 426 aaKnown RBP20.72■□□□□ 0.91
Trim47-202ENSMUST00000106441 Mboat7Q8CHK3 473 aa20.72■□□□□ 0.91
Trim47-202ENSMUST00000106441 Kcnj14Q8JZN3 434 aa20.72■□□□□ 0.91
Trim47-202ENSMUST00000106441 Pla2g12bQ99P27 195 aa20.72■□□□□ 0.91
Trim47-202ENSMUST00000106441 Sdc2P43407 202 aa20.72■□□□□ 0.91
Trim47-202ENSMUST00000106441 Nek1P51954 1203 aa20.72■□□□□ 0.91
Trim47-202ENSMUST00000106441 Ccdc34Q3UI66 367 aa20.72■□□□□ 0.91
Trim47-202ENSMUST00000106441 Ppp2r5bQ6PD28 497 aa20.72■□□□□ 0.91
Trim47-202ENSMUST00000106441 Tbc1d5Q80XQ2 815 aa20.72■□□□□ 0.91
Trim47-202ENSMUST00000106441 Anks1bQ8BIZ1 1259 aa20.72■□□□□ 0.91
Trim47-202ENSMUST00000106441 LarsQ8BMJ2 1178 aa20.72■□□□□ 0.91
Trim47-202ENSMUST00000106441 Nek9Q8K1R7 984 aa20.72■□□□□ 0.91
Trim47-202ENSMUST00000106441 Tc2nQ91XT6 489 aa20.72■□□□□ 0.91
Trim47-202ENSMUST00000106441 Pold4Q9CWP8 107 aa20.72■□□□□ 0.91
Trim47-202ENSMUST00000106441 1700018B08RikQ9DA83 213 aa20.72■□□□□ 0.91
Trim47-202ENSMUST00000106441 Zbtb21E9Q444 1094 aa20.71■□□□□ 0.91
Trim47-202ENSMUST00000106441 Slc4a4O88343 1079 aa20.71■□□□□ 0.91
Trim47-202ENSMUST00000106441 PcQ05920 1178 aa20.71■□□□□ 0.91
Retrieved 100 of 22,080 RNA–protein pairs in 13.2 ms