RNA–Protein interactions for RNA: ENSMUST00000093490.8

Clcn3-203, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-203ENSMUST00000093490 Amhr2Q8K592 568 aa17.47■□□□□ 0.39
Clcn3-203ENSMUST00000093490 Emilin1Q99K41 1017 aa17.47■□□□□ 0.39
Clcn3-203ENSMUST00000093490 HibadhQ99L13 335 aaKnown RBP17.47■□□□□ 0.39
Clcn3-203ENSMUST00000093490 Abca8bQ8K440 1620 aa17.47■□□□□ 0.39
Clcn3-203ENSMUST00000093490 Cdc42bpaQ3UU96 1719 aa17.46■□□□□ 0.39
Clcn3-203ENSMUST00000093490 Skor2A7M7C7 1008 aa17.46■□□□□ 0.39
Clcn3-203ENSMUST00000093490 Cdr1E9Q0B4 517 aa17.46■□□□□ 0.39
Clcn3-203ENSMUST00000093490 Zbtb45Q52KG4 520 aa17.46■□□□□ 0.39
Clcn3-203ENSMUST00000093490 Arhgef2Q60875 985 aa17.46■□□□□ 0.39
Clcn3-203ENSMUST00000093490 NelfbQ8C4Y3 580 aa17.46■□□□□ 0.39
Clcn3-203ENSMUST00000093490 Zbtb1Q91VL9 713 aa17.46■□□□□ 0.39
Clcn3-203ENSMUST00000093490 Ncoa5Q91W39 579 aaKnown RBP17.46■□□□□ 0.39
Clcn3-203ENSMUST00000093490 Mettl5Q8K1A0 209 aa17.46■□□□□ 0.39
Clcn3-203ENSMUST00000093490 Armc2Q3URY6 854 aa17.46■□□□□ 0.39
Clcn3-203ENSMUST00000093490 Brinp3Q499E0 766 aa17.46■□□□□ 0.39
Clcn3-203ENSMUST00000093490 Cd248Q91V98 765 aa17.46■□□□□ 0.39
Clcn3-203ENSMUST00000093490 Trpc3Q9QZC1 836 aa17.46■□□□□ 0.39
Clcn3-203ENSMUST00000093490 Prr5lA2AVJ5 370 aa17.46■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Sh3bp1P55194 680 aa17.46■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Naa25Q8BWZ3 972 aa17.46■□□□□ 0.38
Clcn3-203ENSMUST00000093490 IqcdQ9D3V1 458 aa17.46■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Cxcl11Q9JHH5 100 aa17.46■□□□□ 0.38
Clcn3-203ENSMUST00000093490 CemipQ8BI06 1361 aa17.45■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Foxp1P58462 705 aa17.45■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Taf5lQ91WQ5 589 aa17.45■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Nxf1Q99JX7 618 aaKnown RBP17.45■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Kdm8Q9CXT6 414 aa17.45■□□□□ 0.38
Clcn3-203ENSMUST00000093490 PrimpolQ6P1E7 537 aa17.45■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Traf3ip3Q8C0G2 513 aa17.45■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Hgh1Q8C3I8 393 aa17.45■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Usp14Q9JMA1 493 aaKnown RBP17.45■□□□□ 0.38
Clcn3-203ENSMUST00000093490 HhatQ8BMT9 499 aa17.45■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Synpo2Q91YE8 1087 aaKnown RBP17.45■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Lrrc74aA0A1Y7VMD6 494 aa17.45■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Hace1Q3U0D9 909 aa17.45■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Rbm12b2Q66JV4 834 aaKnown RBP17.45■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Olfr118Q7TRJ6 321 aa17.45■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Atp2a1Q8R429 994 aa17.45■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Filip1Q9CS72 1211 aa17.45■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Mis12Q9CY25 206 aa17.45■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Pabpn1lQ5XFR0 273 aa17.44■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Lrrd1Q8C0R9 853 aa17.44■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Angptl3Q9R182 455 aa17.44■□□□□ 0.38
Clcn3-203ENSMUST00000093490 FosP01101 380 aa17.44■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Myl10Q62082 202 aa17.44■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Lrrc8aQ80WG5 810 aa17.44■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Riok3Q9DBU3 519 aaKnown RBP17.44■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Pde11aP0C1Q2 933 aa17.44■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Strip1Q8C079 837 aa17.44■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Psma7Q9Z2U0 248 aa17.44■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Bfsp1A2AMT1 669 aa17.44■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Cfap70D3YVL2 1141 aa17.44■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Surf1P09925 306 aa17.44■□□□□ 0.38
Clcn3-203ENSMUST00000093490 YwhaeP62259 255 aaKnown RBP17.44■□□□□ 0.38
Clcn3-203ENSMUST00000093490 SpopQ6ZWS8 374 aa17.44■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Slc7a6osQ7TPE5 306 aa17.44■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Ankrd24Q80VM7 985 aa17.44■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Edc3Q8K2D3 508 aaKnown RBP17.44■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Rreb1Q3UH06 1700 aaKnown RBP17.44■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Fam228aQ8CDW1 299 aa17.43■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Nup58Q8R332 587 aa17.43■□□□□ 0.38
Clcn3-203ENSMUST00000093490 GalcP54818 684 aa17.43■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Kif2bQ8C0N1 668 aa17.43■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Klhl40Q9D783 621 aa17.43■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Cst12Q9DAN8 128 aa17.43■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Sh2d4bA6X942 431 aa17.43■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Gm10110D3Z5M2 615 aa17.43■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Msh6P54276 1358 aaKnown RBP17.43■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Znf219Q6IQX8 726 aa17.43■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Spata2Q8K004 515 aa17.43■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Sh2b1Q91ZM2 756 aa17.43■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Cabp7Q91ZM8 215 aa17.43■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Tex19.1Q99MV2 351 aa17.43■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Sar1bQ9CQC9 198 aa17.43■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Serpinb3bQ9D1Q5 387 aa17.43■□□□□ 0.38
Clcn3-203ENSMUST00000093490 ChkbO55229 394 aa17.43■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Cct5P80316 541 aaKnown RBP17.43■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Nucks1Q80XU3 234 aaKnown RBP17.43■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Atad2Q8CDM1 1040 aa17.43■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Drc1Q3USS3 753 aa17.42■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Slc51bQ80WK2 128 aa17.42■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Wdr3Q8BHB4 942 aaKnown RBP17.42■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Ybx3Q9JKB3 361 aaKnown RBP17.42■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Becn2P0DM65 447 aa17.42■□□□□ 0.38
Clcn3-203ENSMUST00000093490 4921530L21RikQ9CQ47 274 aa17.42■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Vwa3bJ9JI28 736 aa17.42■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Retreg2Q6NS82 541 aa17.42■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Dpp8Q80YA7 892 aa17.42■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Mtmr2Q9Z2D1 643 aa17.42■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Prss51A0A286YDY8 319 aa17.42■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Sclt1G5E861 688 aa17.41■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Pfkfb1P70266 471 aa17.41■□□□□ 0.38
Clcn3-203ENSMUST00000093490 EnahQ03173 802 aa17.41■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Zfp781Q0P5U5 243 aa17.41■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Gas7Q60780 421 aa17.41■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Ces5aQ6AW46 575 aa17.41■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Fbxo11Q7TPD1 930 aaKnown RBP17.41■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Sec63Q8VHE0 760 aaKnown RBP17.41■□□□□ 0.38
Clcn3-203ENSMUST00000093490 LpxnQ99N69 386 aa17.41■□□□□ 0.38
Clcn3-203ENSMUST00000093490 Cdc42bpgQ80UW5 1551 aa17.41■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms