RNA–Protein interactions for RNA: ENSMUST00000072551.6

Clrn1-203, Transcript of Clarin-1, mousemouse

TSL 1 (best) BASIC

Gene Clrn1, Length 1,662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-203ENSMUST00000072551 A0A1Y7VML8 143 aa13.24□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Metap2O08663 478 aaKnown RBP13.24□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Me1P06801 572 aa13.24□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Rfx1P48377 963 aa13.24□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Atoh1P48985 351 aa13.24□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Ckap2Q3V1H1 664 aa13.24□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Stxbp5lQ5DQR4 1185 aa13.24□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Trnp1Q80ZI1 223 aa13.24□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Ms4a5Q810P8 197 aa13.24□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Fbxo28Q8BIG4 368 aa13.24□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Tdrd1Q99MV1 1172 aa13.24□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Cdca7Q9D0M2 382 aa13.24□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Spryd7Q3TFQ1 196 aa13.24□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Sh2d1b2Q45HK4 132 aa13.24□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Sp4Q62445 782 aa13.24□□□□□ -0.29
Clrn1-203ENSMUST00000072551 VmacQ8BP01 174 aa13.24□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Dppa3Q8QZY3 150 aa13.24□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Defb15Q8R2I5 79 aa13.24□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Ubac1Q8VDI7 409 aa13.24□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Gm30191A0A0U1RNT7 187 aa13.23□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Eef2kO08796 724 aa13.23□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Mboat4P0C7A3 435 aa13.23□□□□□ -0.29
Clrn1-203ENSMUST00000072551 FlgP11088 336 aa13.23□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Pou3f3P31361 497 aa13.23□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Eps15P42567 897 aa13.23□□□□□ -0.29
Clrn1-203ENSMUST00000072551 FanccP50652 591 aa13.23□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Nsrp1Q5NCR9 542 aa13.23□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Swap70Q6A028 585 aaKnown RBP13.23□□□□□ -0.29
Clrn1-203ENSMUST00000072551 MslnlQ8C160 685 aa13.23□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Tdrd3Q91W18 743 aaKnown RBP13.23□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Gmcl1Q920G9 524 aa13.23□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Rfc4Q99J62 364 aa13.23□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Snap25P60879 206 aa13.22□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Fam83hQ148V8 1209 aa13.22□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Traf3ip1Q149C2 625 aa13.22□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Sfi1Q3UZY0 1216 aaKnown RBP13.22□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Myo19Q5SV80 963 aa13.22□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Dync1li2Q6PDL0 492 aaKnown RBP13.22□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Clca4aQ6Q473 924 aa13.22□□□□□ -0.29
Clrn1-203ENSMUST00000072551 BC048507Q80ZS7 89 aa13.22□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Armc6Q8BNU0 468 aa13.22□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Onecut3Q8K557 490 aa13.22□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Usp33Q8R5K2 909 aa13.22□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Lrrc2Q8VDB8 371 aa13.22□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Cfap99A0A140LIX9 648 aa13.21□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Terf2O35144 541 aa13.21□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Rgs9O54828 675 aa13.21□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Smarce1O54941 411 aaKnown RBP13.21□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Olfm4Q3UZZ4 505 aa13.21□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Tmtc2Q56A06 836 aa13.21□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Tshz1Q5DTH5 1084 aa13.21□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Adgrg6Q6F3F9 1165 aa13.21□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Lca5Q80ST9 704 aa13.21□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Inpp4aQ9EPW0 939 aa13.21□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Tfap4Q9JIZ5 338 aa13.21□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Sall1Q9ER74 1322 aa13.21□□□□□ -0.29
Clrn1-203ENSMUST00000072551 Catsper2A2ARP9 588 aa13.21□□□□□ -0.3
Clrn1-203ENSMUST00000072551 Gm20425E9Q035 978 aaKnown RBP13.21□□□□□ -0.3
Clrn1-203ENSMUST00000072551 Il13ra2O88786 383 aa13.21□□□□□ -0.3
Clrn1-203ENSMUST00000072551 SrprbP47758 269 aa13.21□□□□□ -0.3
Clrn1-203ENSMUST00000072551 LtbrP50284 415 aa13.21□□□□□ -0.3
Clrn1-203ENSMUST00000072551 Adamts19P59509 1210 aa13.21□□□□□ -0.3
Clrn1-203ENSMUST00000072551 Babam1Q3UI43 333 aa13.21□□□□□ -0.3
Clrn1-203ENSMUST00000072551 Tfcp2l1Q3UNW5 479 aa13.21□□□□□ -0.3
Clrn1-203ENSMUST00000072551 Armc2Q3URY6 854 aa13.21□□□□□ -0.3
Clrn1-203ENSMUST00000072551 Grm4Q68EF4 912 aa13.21□□□□□ -0.3
Clrn1-203ENSMUST00000072551 Triml1Q8BVP1 470 aa13.21□□□□□ -0.3
Clrn1-203ENSMUST00000072551 Riox2Q8CD15 465 aa13.21□□□□□ -0.3
Clrn1-203ENSMUST00000072551 Syne4Q8CII8 388 aa13.21□□□□□ -0.3
Clrn1-203ENSMUST00000072551 Rtn1Q8K0T0 780 aa13.21□□□□□ -0.3
Clrn1-203ENSMUST00000072551 Rufy2Q8R4C2 606 aa13.21□□□□□ -0.3
Clrn1-203ENSMUST00000072551 Zbtb12Q9Z150 459 aa13.21□□□□□ -0.3
Clrn1-203ENSMUST00000072551 Zfp804bA0A0G2JGH6 1343 aa13.21□□□□□ -0.3
Clrn1-203ENSMUST00000072551 Plcg1Q62077 1302 aa13.21□□□□□ -0.3
Clrn1-203ENSMUST00000072551 Pus7B7ZNL8 666 aaKnown RBP13.2□□□□□ -0.3
Clrn1-203ENSMUST00000072551 Calm1P0DP26 149 aaKnown RBP13.2□□□□□ -0.3
Clrn1-203ENSMUST00000072551 Calm2P0DP27 149 aaKnown RBP13.2□□□□□ -0.3
Clrn1-203ENSMUST00000072551 Calm3P0DP28 149 aaKnown RBP13.2□□□□□ -0.3
Clrn1-203ENSMUST00000072551 GabpaQ00422 454 aa13.2□□□□□ -0.3
Clrn1-203ENSMUST00000072551 Fbln1Q08879 705 aa13.2□□□□□ -0.3
Clrn1-203ENSMUST00000072551 Atp13a3Q5XF89 1219 aa13.2□□□□□ -0.3
Clrn1-203ENSMUST00000072551 Smarcc2Q6PDG5 1213 aa13.2□□□□□ -0.3
Clrn1-203ENSMUST00000072551 Dcaf15Q6PFH3 600 aa13.2□□□□□ -0.3
Clrn1-203ENSMUST00000072551 Vgll2Q8BGW8 322 aa13.2□□□□□ -0.3
Clrn1-203ENSMUST00000072551 Dnai1Q8C0M8 701 aa13.2□□□□□ -0.3
Clrn1-203ENSMUST00000072551 Arhgef6Q8K4I3 771 aa13.2□□□□□ -0.3
Clrn1-203ENSMUST00000072551 Mov10l1Q99MV5 1187 aa13.2□□□□□ -0.3
Clrn1-203ENSMUST00000072551 Gpaa1Q9WTK3 621 aa13.2□□□□□ -0.3
Clrn1-203ENSMUST00000072551 Ep400Q8CHI8 3072 aaKnown RBP13.2□□□□□ -0.3
Clrn1-203ENSMUST00000072551 Ccdc88cQ6VGS5 2009 aa13.19□□□□□ -0.3
Clrn1-203ENSMUST00000072551 Zbtb21E9Q444 1094 aa13.19□□□□□ -0.3
Clrn1-203ENSMUST00000072551 Nfil3O08750 462 aa13.19□□□□□ -0.3
Clrn1-203ENSMUST00000072551 OatP29758 439 aa13.19□□□□□ -0.3
Clrn1-203ENSMUST00000072551 Trmt1Q3TX08 663 aa13.19□□□□□ -0.3
Clrn1-203ENSMUST00000072551 Arhgef2Q60875 985 aa13.19□□□□□ -0.3
Clrn1-203ENSMUST00000072551 Ccp110Q7TSH4 1004 aa13.19□□□□□ -0.3
Clrn1-203ENSMUST00000072551 Slitrk3Q810B9 980 aa13.19□□□□□ -0.3
Clrn1-203ENSMUST00000072551 Ccdc178Q8CDV0 866 aa13.19□□□□□ -0.3
Clrn1-203ENSMUST00000072551 MyripQ8K3I4 856 aa13.19□□□□□ -0.3
Clrn1-203ENSMUST00000072551 HlcsQ920N2 722 aa13.19□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 42.6 ms