RNA–Protein interactions for RNA: ENSMUST00000061628.6

Pcdh20-201, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 5,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-201ENSMUST00000061628 Lmnb2P21619 596 aaKnown RBP16.28■□□□□ 0.2
Pcdh20-201ENSMUST00000061628 Dzip3Q7TPV2 1204 aa16.28■□□□□ 0.2
Pcdh20-201ENSMUST00000061628 Edc3Q8K2D3 508 aaKnown RBP16.28■□□□□ 0.2
Pcdh20-201ENSMUST00000061628 Eef1gQ9D8N0 437 aaKnown RBP16.28■□□□□ 0.2
Pcdh20-201ENSMUST00000061628 Ncf2O70145 525 aa16.27■□□□□ 0.2
Pcdh20-201ENSMUST00000061628 Sap30bpQ02614 308 aa16.27■□□□□ 0.2
Pcdh20-201ENSMUST00000061628 Atp2a3Q64518 1038 aa16.27■□□□□ 0.2
Pcdh20-201ENSMUST00000061628 Tubgcp2Q921G8 905 aa16.27■□□□□ 0.2
Pcdh20-201ENSMUST00000061628 Drc3Q9D5E4 523 aa16.27■□□□□ 0.2
Pcdh20-201ENSMUST00000061628 Arpp21Q9DCB4 807 aa16.27■□□□□ 0.2
Pcdh20-201ENSMUST00000061628 Synj2Q9D2G5 1434 aa16.27■□□□□ 0.2
Pcdh20-201ENSMUST00000061628 Gm38392E9Q2A2 434 aa16.27■□□□□ 0.2
Pcdh20-201ENSMUST00000061628 XpcP51612 930 aa16.27■□□□□ 0.2
Pcdh20-201ENSMUST00000061628 EnahQ03173 802 aa16.27■□□□□ 0.2
Pcdh20-201ENSMUST00000061628 Ppp2r2cQ8BG02 447 aa16.27■□□□□ 0.2
Pcdh20-201ENSMUST00000061628 Caps2Q8BUG5 550 aa16.27■□□□□ 0.2
Pcdh20-201ENSMUST00000061628 Mtmr7Q9Z2C9 660 aa16.27■□□□□ 0.2
Pcdh20-201ENSMUST00000061628 Dnajc25A2ALW5 357 aa16.27■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Ets1P27577 440 aa16.27■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Gas7Q60780 421 aa16.27■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Ivns1abpQ920Q8 642 aa16.27■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Nxf1Q99JX7 618 aaKnown RBP16.27■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Hps4Q99KG7 671 aa16.27■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Ciao1Q99KN2 339 aa16.27■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Esyt2Q3TZZ7 845 aa16.27■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Ddx41Q91VN6 622 aaKnown RBP16.27■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Nhej1Q3KNJ2 295 aa16.26■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Arhgap10Q6Y5D8 786 aa16.26■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Slc26a7Q8R2Z3 656 aa16.26■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 4930548H24RikQ9D496 437 aa16.26■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Lonrf3Q9D4H7 753 aa16.26■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Nr1i2O54915 431 aa16.26■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Atf5O70191 283 aa16.26■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Trim21Q62191 470 aa16.26■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Wdr24Q8CFJ9 790 aa16.26■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Kif2cQ922S8 721 aa16.26■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Med10Q9CXU0 135 aa16.26■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Vwa3bJ9JI28 736 aa16.26■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Krt19P19001 403 aa16.26■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Kctd6Q8BNL5 237 aa16.26■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Sorbs3Q9R1Z8 733 aa16.26■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 SphkapQ6NSW3 1687 aa16.25■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Surf1P09925 306 aa16.25■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 PhbP67778 272 aaKnown RBP16.25■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Ccdc174Q3U155 467 aa16.25■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Anxa1P10107 346 aaKnown RBP16.25■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Lrriq3Q14DL3 633 aa16.25■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Lrrc8aQ80WG5 810 aa16.25■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Zcchc8Q9CYA6 709 aaKnown RBP16.25■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 MesdQ9ERE7 224 aa16.25■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Trpm2Q91YD4 1506 aa16.25■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Pus7B7ZNL8 666 aaKnown RBP16.25■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Gm4340L7N2C4 268 aa16.25■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Myo1aO88329 1043 aa16.25■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Rad23aP54726 363 aa16.25■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Rapgef5Q8C0Q9 814 aa16.25■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 HmcesQ8R1M0 353 aaKnown RBP16.25■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Bzw2Q91VK1 419 aaKnown RBP16.25■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Saal1Q9D2C2 474 aa16.25■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 RpgrQ9R0X5 1001 aa16.25■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Pbrm1Q8BSQ9 1634 aaKnown RBP16.25■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 1700113H08RikE9Q9Q5 327 aa16.25■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 FosP01101 380 aa16.25■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Pde11aP0C1Q2 933 aa16.25■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Pik3caP42337 1068 aa16.25■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Myo1fP70248 1099 aa16.25■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Ddx31Q6NZQ2 687 aaKnown RBP16.25■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 FliiQ9JJ28 1271 aa16.25■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Cct5P80316 541 aaKnown RBP16.24■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Cct6aP80317 531 aaKnown RBP16.24■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Ddx49Q4FZF3 480 aaKnown RBP16.24■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Oxr1Q4KMM3 866 aa16.24■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Slc44a1Q6X893 653 aa16.24■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Ankrd24Q80VM7 985 aa16.24■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Gpr108Q91WD0 569 aa16.24■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Ttll7A4Q9F0 912 aa16.24■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 LdhbP16125 334 aaKnown RBP16.24■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Slc27a1Q60714 646 aa16.24■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Scyl2Q8CFE4 930 aa16.24■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Ddx24Q9ESV0 857 aaKnown RBP16.24■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Clasp1Q80TV8 1535 aaKnown RBP16.24■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Abcc12Q80WJ6 1366 aa16.24■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Cyp2j7A0A140T8U1 504 aa16.24■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Prpf38aQ4FK66 312 aaKnown RBP16.24■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Stn1Q8K2X3 378 aa16.24■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Kif21bQ9QXL1 1668 aa16.24■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Ctnna1P26231 906 aaKnown RBP16.24■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Gngt1Q61012 74 aa16.24■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Wdr3Q8BHB4 942 aaKnown RBP16.24■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Pcdha7Q91Y13 937 aa16.24■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 H2afzP0C0S6 128 aa16.23■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 H2afvQ3THW5 128 aa16.23■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Nom1Q3UFM5 854 aaKnown RBP16.23■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Tom1l2Q5SRX1 507 aa16.23■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Large2Q5XPT3 690 aa16.23■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Krt9Q6RHW0 743 aa16.23■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Cyp26b1Q811W2 512 aa16.23■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Kcnk13Q8R1P5 405 aa16.23■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Mroh9G5E8L9 891 aa16.23■□□□□ 0.19
Pcdh20-201ENSMUST00000061628 Tnni3P48787 211 aa16.23■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 41.8 ms