RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Copb1Q9JIF7 953 aa11.06□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Uchl5Q9WUP7 329 aa11.06□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 AfdnQ9QZQ1 1820 aaKnown RBP11.06□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 CluhQ5SW19 1315 aa11.06□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Bicdl1A0JNT9 577 aa11.06□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Gm28042B7ZCM9 1014 aa11.06□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Pak1O88643 545 aa11.06□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Cdh15P33146 784 aa11.06□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Nkx2-5P42582 318 aa11.06□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Slc7a3P70423 618 aa11.06□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Cdcp1Q5U462 833 aa11.06□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Adck2Q6NSR3 617 aa11.06□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Fam217aQ9D9W6 419 aa11.06□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Sorbs3Q9R1Z8 733 aa11.06□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Akap11E9Q777 1895 aa11.06□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Prr29B1ARI9 187 aa11.06□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Prl7d1P04769 244 aa11.06□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Usp53P15975 1069 aa11.06□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Ppp1r21Q3TDD9 780 aa11.06□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Adam6bQ6IMH7 756 aa11.06□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Kif1bpQ6ZPU9 617 aa11.06□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 QarsQ8BML9 775 aa11.06□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Prpf3Q922U1 683 aaKnown RBP11.06□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 NapgQ9CWZ7 312 aa11.06□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Greb1lB9EJV3 1913 aa11.06□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Tpp1O89023 562 aa11.05□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Fkbp1aP26883 108 aaKnown RBP11.05□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Igbp1Q61249 340 aa11.05□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Smarca1Q6PGB8 1046 aa11.05□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Ccdc93Q7TQK5 629 aa11.05□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Fam161bQ8CB59 589 aa11.05□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 LpxnQ99N69 386 aa11.05□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Mtfr1lQ9CWE0 289 aa11.05□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Myo1hQ9D6A1 958 aa11.05□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Trip6Q9Z1Y4 480 aa11.05□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Fam83bQ0VBM2 1012 aa11.05□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Brinp3Q499E0 766 aa11.05□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Setdb2Q8C267 713 aa11.05□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 MlphQ91V27 590 aa11.05□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Tube1Q9D6T1 475 aa11.05□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Fbxo3Q9DC63 480 aa11.05□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Mrvi1Q9WUX5 899 aaKnown RBP11.05□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Apol7aB2RT54 418 aa11.05□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Gm5134E9QAB5 671 aa11.05□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Kif3cO35066 796 aa11.05□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Api5O35841 504 aaKnown RBP11.05□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Cct6aP80317 531 aaKnown RBP11.05□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Mdh1bQ5F204 500 aa11.05□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Sik1Q60670 779 aa11.05□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Ces3aQ63880 571 aa11.05□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Spice1Q8C804 860 aa11.05□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Ccdc14Q8K2J4 934 aa11.05□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Ces3bQ8VCU1 571 aa11.05□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Srgap2Q91Z67 1071 aa11.05□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Tpcn1Q9EQJ0 817 aa11.05□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Golga5Q9QYE6 729 aa11.05□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Uso1Q9Z1Z0 959 aaKnown RBP11.05□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 FAM186AQ9D9R9 1790 aa11.04□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Izumo3A6PWV3 263 aa11.04□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Rexo5D3YW29 759 aa11.04□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 MthfslL7N466 203 aa11.04□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 PpardP35396 440 aa11.04□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Plekha7Q3UIL6 1118 aaKnown RBP11.04□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 FntaQ61239 377 aa11.04□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 MmeQ61391 750 aa11.04□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Madcam1Q61826 405 aa11.04□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Ctr9Q62018 1173 aaKnown RBP11.04□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Ccdc73Q8CDM4 1066 aa11.04□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Znf131Q8K3J5 619 aa11.04□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Ankrd31A0A140LI88 1765 aa11.04□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Gm36210A0A1B0GS00 229 aa11.04□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Enc1O35709 589 aa11.04□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 GpiP06745 558 aaKnown RBP11.04□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Exoc5Q3TPX4 708 aa11.04□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Mars2Q499X9 586 aaKnown RBP11.04□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Tmem232Q5K6N0 675 aa11.04□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Txndc16Q7TN22 820 aa11.04□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Lrrc1Q80VQ1 524 aa11.04□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Tango6Q8C3S2 1079 aa11.04□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 E2f4Q8R0K9 410 aa11.04□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Krt82Q99M74 516 aa11.04□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 NsmfQ99NF2 532 aa11.04□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Gpaa1Q9WTK3 621 aa11.04□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Ulk4Q3V129 1303 aa11.04□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Nr5a1P33242 462 aa11.04□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Rfc1P35601 1131 aa11.04□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Meis3P97368 378 aa11.04□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Traf3ip1Q149C2 625 aa11.04□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Rbm12b2Q66JV4 834 aaKnown RBP11.04□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Q8BT18 775 aa11.04□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Sash3Q8K352 380 aa11.04□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Myh3P13541 1940 aa11.03□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Znfx1Q8R151 1909 aaKnown RBP11.03□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 NesQ6P5H2 1864 aaKnown RBP11.03□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Znf638Q61464 1960 aaKnown RBP11.03□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Kcnh4A2A5F7 1018 aa11.03□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 MeiocA2AG06 965 aa11.03□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Akr1c19G3X9Y6 323 aa11.03□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Hdac4Q6NZM9 1076 aa11.03□□□□□ -0.64
Ccdc40-202ENSMUST00000053440 Fchsd1Q6PFY1 688 aa11.03□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 35.4 ms