RNA–Protein interactions for RNA: ENSMUST00000052708.6

Ckap2l-201, Transcript of Cytoskeleton-associated protein 2-like, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap2l, Length 3,137 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2l-201ENSMUST00000052708 Ube2oQ6ZPJ3 1288 aa10.43□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 Lman1lQ8VCD3 505 aa10.43□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 Usp34Q6ZQ93 3582 aa10.43□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 Lnx1O70263 728 aa10.42□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 Qrich1Q3UA37 777 aa10.42□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 D630036H23RikQ3UQD6 204 aa10.42□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 Cdkl5Q3UTQ8 938 aa10.42□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 Grm4Q68EF4 912 aa10.42□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 Tbc1d5Q80XQ2 815 aa10.42□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 Rnf214Q8BFU3 668 aaKnown RBP10.42□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 NenfQ9CQ45 171 aa10.42□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 Styxl1Q9DAR2 321 aa10.42□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 Sept2P42208 361 aaKnown RBP10.42□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 Bach2P97303 839 aa10.42□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 PRAG1Q571I4 1179 aa10.42□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 Nsrp1Q5NCR9 542 aa10.42□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 Irx4Q9QY61 515 aa10.42□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 Gpaa1Q9WTK3 621 aa10.42□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 Mad1l1Q9WTX8 717 aaKnown RBP10.42□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 Usp5P56399 858 aaKnown RBP10.42□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 Epha2Q03145 977 aa10.42□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 LyarQ08288 388 aaKnown RBP10.42□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 Fam89aQ14BJ1 175 aa10.42□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 Cnot7Q60809 285 aa10.42□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 Lca5Q80ST9 704 aa10.42□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 Acnat2Q8BGG9 420 aa10.42□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 Sec62Q8BU14 398 aaKnown RBP10.42□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 Plcd1Q8R3B1 756 aa10.42□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 Ttll1Q91V51 423 aa10.42□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 Chd1lQ9CXF7 900 aa10.42□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 Cep89Q9CZX2 791 aa10.42□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 U2af2P26369 475 aaKnown RBP10.41□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 Mars2Q499X9 586 aaKnown RBP10.41□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 Psen2Q61144 448 aa10.41□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 Tbc1d30Q69ZT9 766 aa10.41□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 Onecut3Q8K557 490 aa10.41□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 Tmem132aQ922P8 1018 aa10.41□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 Zbtb21E9Q444 1094 aa10.41□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 Eif5P59325 429 aaKnown RBP10.41□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 Hvcn1Q3U2S8 269 aa10.41□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 Kcnj14Q8JZN3 434 aa10.41□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 Ndufb9Q9CQJ8 179 aa10.41□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 Znf287Q9EQB9 759 aa10.41□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 SmapQ9R0P4 181 aaKnown RBP10.41□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 Gm5114W4VSN8 858 aa10.41□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 SynrgQ5SV85 1306 aa10.41□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 Dicer1Q8R418 1916 aa10.41□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 Krt74Q6IFZ9 495 aa10.4□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 Triml1Q8BVP1 470 aa10.4□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 Mettl16Q9CQG2 553 aaKnown RBP10.4□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 Inpp4aQ9EPW0 939 aa10.4□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 Pfkfb3A7UAK5 555 aa10.4□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 Cyp3a25O09158 503 aa10.4□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 Armc2Q3URY6 854 aa10.4□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 Usp28Q5I043 1051 aa10.4□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 WaplQ65Z40 1200 aaKnown RBP10.4□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 Q8K2W9 541 aa10.4□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 Snapc2Q91XA5 359 aa10.4□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 Trex1Q91XB0 314 aa10.4□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 Psmd10Q9Z2X2 231 aa10.4□□□□□ -0.74
Ckap2l-201ENSMUST00000052708 Scn3aA2ASI5 1947 aa10.4□□□□□ -0.75
Ckap2l-201ENSMUST00000052708 Cavin1O54724 392 aa10.4□□□□□ -0.75
Ckap2l-201ENSMUST00000052708 Kcna1P16388 495 aa10.4□□□□□ -0.75
Ckap2l-201ENSMUST00000052708 LeprP48356 1162 aa10.4□□□□□ -0.75
Ckap2l-201ENSMUST00000052708 CtshP49935 333 aa10.4□□□□□ -0.75
Ckap2l-201ENSMUST00000052708 Zhx1P70121 873 aa10.4□□□□□ -0.75
Ckap2l-201ENSMUST00000052708 NogP97466 232 aa10.4□□□□□ -0.75
Ckap2l-201ENSMUST00000052708 Gm11437Q5QR91 290 aa10.4□□□□□ -0.75
Ckap2l-201ENSMUST00000052708 Slc27a1Q60714 646 aa10.4□□□□□ -0.75
Ckap2l-201ENSMUST00000052708 Clca4aQ6Q473 924 aa10.4□□□□□ -0.75
Ckap2l-201ENSMUST00000052708 Srgap1Q91Z69 1062 aa10.4□□□□□ -0.75
Ckap2l-201ENSMUST00000052708 Usp31E9Q6Y8 1344 aa10.39□□□□□ -0.75
Ckap2l-201ENSMUST00000052708 Tbc1d8bA3KGB4 1114 aa10.39□□□□□ -0.75
Ckap2l-201ENSMUST00000052708 Dync1i1O88485 628 aa10.39□□□□□ -0.75
Ckap2l-201ENSMUST00000052708 Esyt1Q3U7R1 1092 aaKnown RBP10.39□□□□□ -0.75
Ckap2l-201ENSMUST00000052708 Mdh1bQ5F204 500 aa10.39□□□□□ -0.75
Ckap2l-201ENSMUST00000052708 Stxbp2Q64324 593 aa10.39□□□□□ -0.75
Ckap2l-201ENSMUST00000052708 MslnlQ8C160 685 aa10.39□□□□□ -0.75
Ckap2l-201ENSMUST00000052708 GrapQ9CX99 217 aa10.39□□□□□ -0.75
Ckap2l-201ENSMUST00000052708 Cd2apQ9JLQ0 637 aa10.39□□□□□ -0.75
Ckap2l-201ENSMUST00000052708 Sbf2E9PXF8 1872 aa10.39□□□□□ -0.75
Ckap2l-201ENSMUST00000052708 Fam184aE9PW83 1143 aa10.39□□□□□ -0.75
Ckap2l-201ENSMUST00000052708 ThbdP15306 577 aa10.39□□□□□ -0.75
Ckap2l-201ENSMUST00000052708 Wnt7aP24383 349 aa10.39□□□□□ -0.75
Ckap2l-201ENSMUST00000052708 Myo1bP46735 1107 aa10.39□□□□□ -0.75
Ckap2l-201ENSMUST00000052708 Bace1P56818 501 aa10.39□□□□□ -0.75
Ckap2l-201ENSMUST00000052708 Ncf1Q09014 390 aa10.39□□□□□ -0.75
Ckap2l-201ENSMUST00000052708 Ttbk2Q3UVR3 1243 aa10.39□□□□□ -0.75
Ckap2l-201ENSMUST00000052708 Slc9c1Q6UJY2 1175 aa10.39□□□□□ -0.75
Ckap2l-201ENSMUST00000052708 Armc6Q8BNU0 468 aa10.39□□□□□ -0.75
Ckap2l-201ENSMUST00000052708 Scfd1Q8BRF7 639 aaKnown RBP10.39□□□□□ -0.75
Ckap2l-201ENSMUST00000052708 Naa30Q8CES0 364 aa10.39□□□□□ -0.75
Ckap2l-201ENSMUST00000052708 Rbm42Q91V81 474 aaKnown RBP10.39□□□□□ -0.75
Ckap2l-201ENSMUST00000052708 Tfap4Q9JIZ5 338 aa10.39□□□□□ -0.75
Ckap2l-201ENSMUST00000052708 Col11a1Q61245 1804 aa10.39□□□□□ -0.75
Ckap2l-201ENSMUST00000052708 Dnm1P39053 867 aa10.38□□□□□ -0.75
Ckap2l-201ENSMUST00000052708 Vps37dQ810I0 261 aa10.38□□□□□ -0.75
Ckap2l-201ENSMUST00000052708 Dnaaf2Q8BPI1 814 aa10.38□□□□□ -0.75
Ckap2l-201ENSMUST00000052708 Olfml1Q8BSH2 233 aa10.38□□□□□ -0.75
Ckap2l-201ENSMUST00000052708 Rbm28Q8CGC6 750 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 33.7 ms