RNA–Protein interactions for RNA: ENSMUST00000023352.8

Prkdc-201, Transcript of DNA-dependent protein kinase catalytic subunit, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prkdc, Length 12,647 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prkdc-201ENSMUST00000023352 Cct5P80316 541 aaKnown RBP5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Trim37Q6PCX9 961 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Phf20l1Q8CCJ9 1013 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Dnajc10Q9DC23 793 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Tnfrsf10bQ9QZM4 381 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Ankrd2Q9WV06 328 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Ror2Q9Z138 944 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Znf394Q9Z1D9 521 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 NktrP30415 1453 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Lmnb2P21619 596 aaKnown RBP5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Dab2P98078 766 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Ppp1r12cQ3UMT1 782 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Hexim1Q8R409 356 aaKnown RBP5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Pcdhb2Q91Y00 799 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Tcp1P11983 556 aaKnown RBP5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Xrcc6P23475 608 aa5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Rasa2P58069 847 aa5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Patl1Q3TC46 770 aaKnown RBP5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Ano6Q6P9J9 911 aa5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Emilin2Q8K482 1074 aa5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Drc3Q9D5E4 523 aa5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Sh3tc1G3X9F6 1346 aa5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Cul4bA2A432 970 aaKnown RBP5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Tmtc1Q3UV71 942 aa5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Nek5Q7TSC3 627 aa5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Zfp113Q8C689 439 aa5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Ccdc28aQ8CEI3 192 aa5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Chchd3Q9CRB9 227 aaKnown RBP5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Gm1661E9Q963 441 aa5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Zbtb38Q3LR78 1197 aa5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Arhgap30Q640N3 1101 aa5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Ccdc155Q80VJ8 648 aa5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Taf5lQ91WQ5 589 aa5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Ndufa8Q9DCJ5 172 aa5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Fam81bA0A140LI28 432 aa5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Satb2Q8VI24 733 aa5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Cd72P21855 354 aa5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Ca8P28651 291 aa5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Serpinc1P32261 465 aa5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Traf5P70191 558 aa5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Parp10Q8CIE4 960 aa5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Cuedc2Q9CXX9 284 aa5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Batf3Q9D275 118 aa5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Pacsin2Q9WVE8 486 aaKnown RBP5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 VirmaA2AIV2 1811 aaKnown RBP5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Gm5936A2BG95 728 aa5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Gm5640A3KG49 728 aa5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 CltaO08585 235 aa5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Sult6b1P0CC03 303 aa5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Nme8Q715T0 586 aa5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Zmynd15Q8C0R7 736 aa5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Acot9Q9R0X4 439 aaKnown RBP5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 SufuQ9Z0P7 484 aa5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 NalcnQ8BXR5 1738 aa5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Mtx1P47802 317 aa5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Arhgap18Q8K0Q5 663 aa5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Ifih1Q8R5F7 1025 aa5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Kif17Q99PW8 1038 aa5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Cdk4P30285 303 aa5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 S100a5P63084 93 aa5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Nxf2Q4ZGD8 691 aa5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Cep170bQ80U49 1574 aa5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Ell2Q3UKU1 639 aa5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 WdpcpQ8C456 722 aa5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Slc4a8Q8JZR6 1089 aa5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Mrpl12Q9DB15 201 aaKnown RBP5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Gm1993A6X8I0 212 aa5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 SlxD3Z347 212 aa5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Znf568E9PYI1 671 aa5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 ByslO54825 436 aaKnown RBP5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Nek1P51954 1203 aa5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Fam207aP58468 219 aaKnown RBP5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 BcanQ61361 883 aa5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Pde1cQ64338 706 aa5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Atp2a3Q64518 1038 aa5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Ppp2r2cQ8BG02 447 aa5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Nup58Q8R332 587 aa5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Ube3bQ9ES34 1070 aa5.03□□□□□ -1.6
Prkdc-201ENSMUST00000023352 N4bp2F8VQG7 1678 aaKnown RBP5.02□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Eef2kO08796 724 aa5.02□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Ccdc84Q4VA36 332 aaKnown RBP5.02□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Trim60Q8VI40 466 aa5.02□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Glrx3Q9CQM9 337 aa5.02□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Prpf40aQ9R1C7 953 aaKnown RBP5.02□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Scn7aB1AYL1 1681 aa5.02□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Serpini1O35684 410 aa5.02□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Atp6v0a2P15920 856 aa5.02□□□□□ -1.61
Prkdc-201ENSMUST00000023352 U2af1l4Q8BGJ9 220 aa5.02□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Tcp11l1Q8BTG3 509 aa5.02□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Exoc1Q8R3S6 894 aa5.02□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Xrcc4Q924T3 326 aa5.02□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Usp42B2RQC2 1324 aaKnown RBP5.02□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Fam186bD3Z420 943 aa5.02□□□□□ -1.61
Prkdc-201ENSMUST00000023352 GclcP97494 637 aa5.02□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Q3TYL0 343 aa5.02□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Fsip1Q9D3V5 435 aa5.02□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Ift81O35594 676 aa5.02□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Wfs1P56695 890 aa5.02□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Cnot6lQ8VEG6 555 aa5.02□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Efcab2Q9CQ46 164 aa5.02□□□□□ -1.61
Retrieved 100 of 22,080 RNA–protein pairs in 15 ms