RNA–Protein interactions for RNA: YGL172W

NUP49, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP49, Length 1,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP49YGL172W HEM15P16622 393 aa6.85□□□□□ -1.31
NUP49YGL172W FPR1P20081 114 aaKnown RBP6.85□□□□□ -1.31
NUP49YGL172W AAT2P23542 418 aaKnown RBP6.85□□□□□ -1.31
NUP49YGL172W RBK1P25332 333 aa6.85□□□□□ -1.31
NUP49YGL172W ARP1P38696 384 aa6.85□□□□□ -1.31
NUP49YGL172W CRP1P38845 465 aaKnown RBP6.85□□□□□ -1.31
NUP49YGL172W PAN6P40459 309 aa6.85□□□□□ -1.31
NUP49YGL172W IST3P40565 148 aaPredicted RBP6.85□□□□□ -1.31
NUP49YGL172W YFL012WP43580 148 aa6.85□□□□□ -1.31
NUP49YGL172W TEP1P53916 434 aa6.85□□□□□ -1.31
NUP49YGL172W RSC4Q02206 625 aa6.85□□□□□ -1.31
NUP49YGL172W ELP4Q02884 456 aaKnown RBP6.85□□□□□ -1.31
NUP49YGL172W FRA1Q07825 749 aa6.85□□□□□ -1.31
NUP49YGL172W CMS1Q07897 291 aaKnown RBP6.85□□□□□ -1.31
NUP49YGL172W MPC54Q08550 464 aa6.85□□□□□ -1.31
NUP49YGL172W RPS9AO13516 197 aaKnown RBP6.84□□□□□ -1.31
NUP49YGL172W TEF1P02994 458 aaKnown RBP6.84□□□□□ -1.31
NUP49YGL172W ADH4P10127 382 aa6.84□□□□□ -1.31
NUP49YGL172W SCH9P11792 824 aaKnown RBP6.84□□□□□ -1.31
NUP49YGL172W ACO1P19414 778 aaKnown RBP RIP-Chip data6.84□□□□□ -1.31not detected
NUP49YGL172W YCL068CP25593 260 aa6.84□□□□□ -1.31
NUP49YGL172W GUT2P32191 649 aa6.84□□□□□ -1.31
NUP49YGL172W HEM12P32347 362 aaPredicted RBP6.84□□□□□ -1.31
NUP49YGL172W LIP5P32875 414 aa6.84□□□□□ -1.31
NUP49YGL172W TYE7P33122 291 aaPredicted RBP6.84□□□□□ -1.31
NUP49YGL172W PXA2P34230 853 aa6.84□□□□□ -1.31
NUP49YGL172W PEX5P35056 612 aa6.84□□□□□ -1.31
NUP49YGL172W TFA2P36145 328 aa6.84□□□□□ -1.31
NUP49YGL172W OSW5P40219 148 aa6.84□□□□□ -1.31
NUP49YGL172W DPH1P40487 425 aaKnown RBP6.84□□□□□ -1.31
NUP49YGL172W ALA1P40825 983 aaKnown RBP6.84□□□□□ -1.31
NUP49YGL172W SAE2P46946 345 aa6.84□□□□□ -1.31
NUP49YGL172W YJR039WP47107 1121 aa6.84□□□□□ -1.31
NUP49YGL172W STR3P53101 465 aaKnown RBP6.84□□□□□ -1.31
NUP49YGL172W ART5P53244 586 aaKnown RBP6.84□□□□□ -1.31
NUP49YGL172W PRM1P53835 661 aa6.84□□□□□ -1.31
NUP49YGL172W ORC3P54790 616 aa6.84□□□□□ -1.31
NUP49YGL172W MET14Q02196 202 aa6.84□□□□□ -1.31
NUP49YGL172W ADE13Q05911 482 aaKnown RBP6.84□□□□□ -1.31
NUP49YGL172W UTP13Q05946 817 aaKnown RBP6.84□□□□□ -1.31
NUP49YGL172W LCB5Q06147 687 aaKnown RBP6.84□□□□□ -1.31
NUP49YGL172W ERF2Q06551 359 aa6.84□□□□□ -1.31
NUP49YGL172W CLP1Q08685 445 aaPredicted RBP6.84□□□□□ -1.31
NUP49YGL172W TRE2Q08693 809 aa6.84□□□□□ -1.31
NUP49YGL172W PER33Q12144 273 aa6.84□□□□□ -1.31
NUP49YGL172W RAD1P06777 1100 aa6.84□□□□□ -1.32
NUP49YGL172W LEU1P07264 779 aaKnown RBP6.84□□□□□ -1.32
NUP49YGL172W SEC63P14906 663 aa6.84□□□□□ -1.32
NUP49YGL172W CLN1P20437 546 aa6.84□□□□□ -1.32
NUP49YGL172W CHL1P22516 861 aaPredicted RBP6.84□□□□□ -1.32
NUP49YGL172W DCC1P25559 380 aa6.84□□□□□ -1.32
NUP49YGL172W KAR4P25583 335 aa6.84□□□□□ -1.32
NUP49YGL172W URA10P30402 227 aa6.84□□□□□ -1.32
NUP49YGL172W ECM32P32644 1121 aaKnown RBP6.84□□□□□ -1.32
NUP49YGL172W ALY1P36117 915 aa6.84□□□□□ -1.32
NUP49YGL172W PRE3P38624 215 aa6.84□□□□□ -1.32
NUP49YGL172W CCT2P39076 527 aaKnown RBP6.84□□□□□ -1.32
NUP49YGL172W SAP1P39955 897 aaKnown RBP6.84□□□□□ -1.32
NUP49YGL172W RAD26P40352 1085 aa6.84□□□□□ -1.32
NUP49YGL172W LSB3P43603 459 aaKnown RBP6.84□□□□□ -1.32
NUP49YGL172W BUD13P46947 266 aaPredicted RBP6.84□□□□□ -1.32
NUP49YGL172W FAA4P47912 694 aaKnown RBP6.84□□□□□ -1.32
NUP49YGL172W ZIP2P53061 704 aa6.84□□□□□ -1.32
NUP49YGL172W EMC4P53073 190 aa6.84□□□□□ -1.32
NUP49YGL172W SHR3Q02774 210 aa6.84□□□□□ -1.32
NUP49YGL172W YPR114WQ06107 315 aa6.84□□□□□ -1.32
NUP49YGL172W YPR084WQ06821 456 aa6.84□□□□□ -1.32
NUP49YGL172W TSC13Q99190 310 aa6.84□□□□□ -1.32
NUP49YGL172W MEX67Q99257 599 aaKnown RBP6.84□□□□□ -1.32
NUP49YGL172W FRT1Q99332 602 aa6.84□□□□□ -1.32
NUP49YGL172W ARG4P04076 463 aaPredicted RBP6.83□□□□□ -1.32
NUP49YGL172W TEC1P18412 486 aa6.83□□□□□ -1.32
NUP49YGL172W YME1P32795 747 aa6.83□□□□□ -1.32
NUP49YGL172W SRP101P32916 621 aa6.83□□□□□ -1.32
NUP49YGL172W SPT23P35210 1082 aa6.83□□□□□ -1.32
NUP49YGL172W SOH1P38633 127 aa6.83□□□□□ -1.32
NUP49YGL172W SMX2P40204 77 aaKnown RBP6.83□□□□□ -1.32
NUP49YGL172W SAP4P53036 818 aa6.83□□□□□ -1.32
NUP49YGL172W MNT2P53059 558 aa6.83□□□□□ -1.32
NUP49YGL172W VAC7P53950 1165 aa6.83□□□□□ -1.32
NUP49YGL172W PEX13P80667 386 aa6.83□□□□□ -1.32
NUP49YGL172W CUE5Q08412 411 aaKnown RBP6.83□□□□□ -1.32
NUP49YGL172W TOR1P35169 2470 aa6.83□□□□□ -1.32
NUP49YGL172W ERG20P08524 352 aaKnown RBP6.82□□□□□ -1.32
NUP49YGL172W ILS1P09436 1072 aaKnown RBP6.82□□□□□ -1.32
NUP49YGL172W PMA2P19657 947 aa6.82□□□□□ -1.32
NUP49YGL172W MRPL25P23369 157 aa6.82□□□□□ -1.32
NUP49YGL172W VAN1P23642 535 aa6.82□□□□□ -1.32
NUP49YGL172W MNE1P24720 663 aa6.82□□□□□ -1.32
NUP49YGL172W AEP1P32493 518 aa6.82□□□□□ -1.32
NUP49YGL172W SMI1P32566 505 aa6.82□□□□□ -1.32
NUP49YGL172W SCD5P34758 872 aa6.82□□□□□ -1.32
NUP49YGL172W GDH3P39708 457 aa6.82□□□□□ -1.32
NUP49YGL172W RGI2P40188 164 aa6.82□□□□□ -1.32
NUP49YGL172W TES1P41903 349 aaKnown RBP6.82□□□□□ -1.32
NUP49YGL172W SIP4P46954 829 aa6.82□□□□□ -1.32
NUP49YGL172W URB2P47108 1174 aa6.82□□□□□ -1.32
NUP49YGL172W YJR124CP47159 448 aa6.82□□□□□ -1.32
NUP49YGL172W NPY1P53164 384 aa6.82□□□□□ -1.32
NUP49YGL172W IPI3P53877 555 aa6.82□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 59.3 ms