RNA–Protein interactions for RNA: YER018C

SPC25, Transcript of Component of the kinetochore-associated Ndc80 complex, yeastyeast

Gene SPC25, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC25YER018C HRR25P29295 494 aaKnown RBP10.92□□□□□ -0.66
SPC25YER018C BEM1P29366 551 aa10.92□□□□□ -0.66
SPC25YER018C CYM1P32898 989 aa10.92□□□□□ -0.66
SPC25YER018C MAK5P38112 773 aaPredicted RBP10.92□□□□□ -0.66
SPC25YER018C YHI9P38765 294 aa10.92□□□□□ -0.66
SPC25YER018C LIN1P38852 340 aaPredicted RBP10.92□□□□□ -0.66
SPC25YER018C RPS14BP39516 138 aaKnown RBP10.92□□□□□ -0.66
SPC25YER018C SEO1P39709 593 aa10.92□□□□□ -0.66
SPC25YER018C PEP8P40335 379 aa10.92□□□□□ -0.66
SPC25YER018C SIP4P46954 829 aa10.92□□□□□ -0.66
SPC25YER018C CCT8P47079 568 aaKnown RBP10.92□□□□□ -0.66
SPC25YER018C PYK2P52489 506 aaKnown RBP10.92□□□□□ -0.66
SPC25YER018C LSC1P53598 329 aaKnown RBP10.92□□□□□ -0.66
SPC25YER018C YPR114WQ06107 315 aa10.92□□□□□ -0.66
SPC25YER018C RSC2Q06488 889 aa10.92□□□□□ -0.66
SPC25YER018C RAD59Q12223 238 aa10.92□□□□□ -0.66
SPC25YER018C CCH1P50077 2039 aa10.92□□□□□ -0.66
SPC25YER018C YPR117WQ06116 2489 aa10.91□□□□□ -0.66
SPC25YER018C RIM1P32445 135 aaKnown RBP10.91□□□□□ -0.66
SPC25YER018C GCD11P32481 527 aaKnown RBP10.91□□□□□ -0.66
SPC25YER018C AEP1P32493 518 aa10.91□□□□□ -0.66
SPC25YER018C CTF13P35203 478 aa10.91□□□□□ -0.66
SPC25YER018C RRP14P36080 434 aaKnown RBP10.91□□□□□ -0.66
SPC25YER018C NEM1P38757 446 aa10.91□□□□□ -0.66
SPC25YER018C MEF2P39677 819 aa10.91□□□□□ -0.66
SPC25YER018C OAF1P39720 1047 aaPredicted RBP10.91□□□□□ -0.66
SPC25YER018C TES1P41903 349 aaKnown RBP10.91□□□□□ -0.66
SPC25YER018C LIA1P47120 325 aaKnown RBP10.91□□□□□ -0.66
SPC25YER018C RSM7P47150 247 aa10.91□□□□□ -0.66
SPC25YER018C ORC3P54790 616 aa10.91□□□□□ -0.66
SPC25YER018C PET117Q02771 107 aa10.91□□□□□ -0.66
SPC25YER018C TDA5Q06417 326 aaKnown RBP10.91□□□□□ -0.66
SPC25YER018C FLC1Q08967 793 aa10.91□□□□□ -0.66
SPC25YER018C SLP1Q12232 587 aa10.91□□□□□ -0.66
SPC25YER018C HIS5P07172 385 aa10.9□□□□□ -0.66
SPC25YER018C LEU1P07264 779 aaKnown RBP10.9□□□□□ -0.66
SPC25YER018C PMA2P19657 947 aa10.9□□□□□ -0.66
SPC25YER018C MNE1P24720 663 aa10.9□□□□□ -0.66
SPC25YER018C AAD3P25612 363 aa10.9□□□□□ -0.66
SPC25YER018C IMP3P32899 183 aaPredicted RBP10.9□□□□□ -0.66
SPC25YER018C STE13P33894 931 aa10.9□□□□□ -0.66
SPC25YER018C ALY1P36117 915 aa10.9□□□□□ -0.66
SPC25YER018C GDT1P38301 280 aaPredicted RBP10.9□□□□□ -0.66
SPC25YER018C YJR124CP47159 448 aa10.9□□□□□ -0.66
SPC25YER018C FLC3P53121 802 aa10.9□□□□□ -0.66
SPC25YER018C PEX8P53248 589 aa10.9□□□□□ -0.66
SPC25YER018C IPI3P53877 555 aa10.9□□□□□ -0.66
SPC25YER018C RPL34AP87262 121 aaPredicted RBP10.9□□□□□ -0.66
SPC25YER018C YDR109CQ04585 715 aa10.9□□□□□ -0.66
SPC25YER018C SYT1Q06836 1226 aa10.9□□□□□ -0.66
SPC25YER018C ADY3Q07732 790 aa10.9□□□□□ -0.66
SPC25YER018C PER33Q12144 273 aa10.9□□□□□ -0.66
SPC25YER018C KCS1Q12494 1050 aa10.9□□□□□ -0.66
SPC25YER018C RGS2Q99188 309 aa10.9□□□□□ -0.66
SPC25YER018C YLR149CQ99296 730 aa10.9□□□□□ -0.66
SPC25YER018C YMR084WA2P2R3 262 aa10.89□□□□□ -0.67
SPC25YER018C PXA2P34230 853 aa10.89□□□□□ -0.67
SPC25YER018C HOS4P40480 1083 aa10.89□□□□□ -0.67
SPC25YER018C RMD8P43620 662 aa10.89□□□□□ -0.67
SPC25YER018C PRM1P53835 661 aa10.89□□□□□ -0.67
SPC25YER018C VAC7P53950 1165 aa10.89□□□□□ -0.67
SPC25YER018C YMR209CQ03648 457 aa10.89□□□□□ -0.67
SPC25YER018C LCB5Q06147 687 aaKnown RBP10.89□□□□□ -0.67
SPC25YER018C YLR177WQ06251 628 aa10.89□□□□□ -0.67
SPC25YER018C CLP1Q08685 445 aaPredicted RBP10.89□□□□□ -0.67
SPC25YER018C MSF1P08425 469 aa10.88□□□□□ -0.67
SPC25YER018C FUS1P11710 512 aa10.88□□□□□ -0.67
SPC25YER018C GLN4P13188 809 aaKnown RBP10.88□□□□□ -0.67
SPC25YER018C EMC1P25574 760 aa10.88□□□□□ -0.67
SPC25YER018C SCD5P34758 872 aa10.88□□□□□ -0.67
SPC25YER018C TOM20P35180 183 aa10.88□□□□□ -0.67
SPC25YER018C PFK26P40433 827 aaKnown RBP10.88□□□□□ -0.67
SPC25YER018C YJL107CP42947 387 aa10.88□□□□□ -0.67
SPC25YER018C ARH1P48360 493 aa10.88□□□□□ -0.67
SPC25YER018C MNT2P53059 558 aa10.88□□□□□ -0.67
SPC25YER018C EMC4P53073 190 aa10.88□□□□□ -0.67
SPC25YER018C BUD32P53323 261 aa10.88□□□□□ -0.67
SPC25YER018C YNL143CP53908 130 aa10.88□□□□□ -0.67
SPC25YER018C TFB2Q02939 513 aa10.88□□□□□ -0.67
SPC25YER018C YDR132CQ03900 495 aa10.88□□□□□ -0.67
SPC25YER018C TAF11Q04226 346 aa10.88□□□□□ -0.67
SPC25YER018C YMR030W-AQ3E760 96 aa10.88□□□□□ -0.67
SPC25YER018C AMD1P15274 810 aaKnown RBP10.87□□□□□ -0.67
SPC25YER018C MRM1P25270 412 aa10.87□□□□□ -0.67
SPC25YER018C LOS1P33418 1100 aaPredicted RBP10.87□□□□□ -0.67
SPC25YER018C YBR032WP38223 100 aa10.87□□□□□ -0.67
SPC25YER018C YBR062CP38239 180 aa10.87□□□□□ -0.67
SPC25YER018C ACO2P39533 789 aa10.87□□□□□ -0.67
SPC25YER018C COG1P53079 417 aa10.87□□□□□ -0.67
SPC25YER018C SPC105P53148 917 aa10.87□□□□□ -0.67
SPC25YER018C MAP1Q01662 387 aaKnown RBP RIP-Chip data10.87□□□□□ -0.67not detected
SPC25YER018C MCP2Q06567 569 aa10.87□□□□□ -0.67
SPC25YER018C NSE1Q07913 336 aa10.87□□□□□ -0.67
SPC25YER018C CHS5Q12114 671 aaKnown RBP10.87□□□□□ -0.67
SPC25YER018C MPD2Q99316 277 aa10.87□□□□□ -0.67
SPC25YER018C YCR099CP25657 155 aa10.86□□□□□ -0.67
SPC25YER018C YJU3P28321 313 aa10.86□□□□□ -0.67
SPC25YER018C HEM3P28789 327 aa10.86□□□□□ -0.67
SPC25YER018C BEM3P32873 1128 aa10.86□□□□□ -0.67
SPC25YER018C RRN3P36070 627 aa10.86□□□□□ -0.67
Retrieved 100 of 5,963 RNA–protein pairs in 30.9 ms