RNA–Protein interactions for RNA: YAL005C

SSA1, Transcript of ATPase involved in protein folding and NLS-directed nuclear transport, yeastyeast

Gene SSA1, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSA1YAL005C SEO1P39709 593 aa13.54□□□□□ -0.24
SSA1YAL005C PYK2P52489 506 aaKnown RBP13.54□□□□□ -0.24
SSA1YAL005C SAP4P53036 818 aa13.54□□□□□ -0.24
SSA1YAL005C HST2P53686 357 aa13.54□□□□□ -0.24
SSA1YAL005C RCF1Q03713 159 aa13.54□□□□□ -0.24
SSA1YAL005C YDL121CQ07541 149 aa13.54□□□□□ -0.24
SSA1YAL005C TRE2Q08693 809 aa13.54□□□□□ -0.24
SSA1YAL005C HSP26P15992 214 aaKnown RBP RIP-Chip data13.53□□□□□ -0.24not detected
SSA1YAL005C DCC1P25559 380 aa13.53□□□□□ -0.24
SSA1YAL005C REF2P42073 533 aaPredicted RBP13.53□□□□□ -0.24
SSA1YAL005C UBR1P19812 1950 aa13.53□□□□□ -0.24
SSA1YAL005C SSC1P0CS90 654 aaKnown RBP13.52□□□□□ -0.24
SSA1YAL005C AEP1P32493 518 aa13.52□□□□□ -0.24
SSA1YAL005C CIN4P39110 191 aa13.52□□□□□ -0.24
SSA1YAL005C FLC3P53121 802 aa13.52□□□□□ -0.24
SSA1YAL005C ORC3P54790 616 aa13.52□□□□□ -0.24
SSA1YAL005C MPD2Q99316 277 aa13.52□□□□□ -0.24
SSA1YAL005C LEU1P07264 779 aaKnown RBP13.52□□□□□ -0.25
SSA1YAL005C FPR1P20081 114 aaKnown RBP13.52□□□□□ -0.25
SSA1YAL005C YIR007WP40566 764 aa13.52□□□□□ -0.25
SSA1YAL005C TES1P41903 349 aaKnown RBP13.52□□□□□ -0.25
SSA1YAL005C CSN12P47130 423 aa13.52□□□□□ -0.25
SSA1YAL005C PRM1P53835 661 aa13.52□□□□□ -0.25
SSA1YAL005C CDC123Q05791 360 aa13.52□□□□□ -0.25
SSA1YAL005C TDA5Q06417 326 aaKnown RBP13.52□□□□□ -0.25
SSA1YAL005C OMS1Q06668 471 aa13.52□□□□□ -0.25
SSA1YAL005C NSE1Q07913 336 aa13.52□□□□□ -0.25
SSA1YAL005C IRC10Q08118 586 aa13.52□□□□□ -0.25
SSA1YAL005C SEC63P14906 663 aa13.51□□□□□ -0.25
SSA1YAL005C YSP3P25036 478 aa13.51□□□□□ -0.25
SSA1YAL005C TYE7P33122 291 aaPredicted RBP13.51□□□□□ -0.25
SSA1YAL005C STE13P33894 931 aa13.51□□□□□ -0.25
SSA1YAL005C YHI9P38765 294 aa13.51□□□□□ -0.25
SSA1YAL005C EMC4P53073 190 aa13.51□□□□□ -0.25
SSA1YAL005C COG1P53079 417 aa13.51□□□□□ -0.25
SSA1YAL005C CLP1Q08685 445 aaPredicted RBP13.51□□□□□ -0.25
SSA1YAL005C MSF1P08425 469 aa13.51□□□□□ -0.25
SSA1YAL005C ATP12P22135 325 aa13.51□□□□□ -0.25
SSA1YAL005C YJU3P28321 313 aa13.51□□□□□ -0.25
SSA1YAL005C LIP5P32875 414 aa13.51□□□□□ -0.25
SSA1YAL005C SCD5P34758 872 aa13.51□□□□□ -0.25
SSA1YAL005C PXA1P41909 870 aa13.51□□□□□ -0.25
SSA1YAL005C ATH1P48016 1211 aa13.51□□□□□ -0.25
SSA1YAL005C BIO4P53630 237 aa13.51□□□□□ -0.25
SSA1YAL005C YNR061CP53747 219 aa13.51□□□□□ -0.25
SSA1YAL005C NOP15P53927 220 aaPredicted RBP13.51□□□□□ -0.25
SSA1YAL005C YDR132CQ03900 495 aa13.51□□□□□ -0.25
SSA1YAL005C RMD5Q12508 421 aa13.51□□□□□ -0.25
SSA1YAL005C SRV2P17555 526 aaKnown RBP13.5□□□□□ -0.25
SSA1YAL005C RAD51P25454 400 aa13.5□□□□□ -0.25
SSA1YAL005C YCR051WP25631 222 aa13.5□□□□□ -0.25
SSA1YAL005C SET3P36124 751 aa13.5□□□□□ -0.25
SSA1YAL005C MRP21P38175 177 aa13.5□□□□□ -0.25
SSA1YAL005C RAD26P40352 1085 aa13.5□□□□□ -0.25
SSA1YAL005C VAC7P53950 1165 aa13.5□□□□□ -0.25
SSA1YAL005C FAR8Q05040 523 aa13.5□□□□□ -0.25
SSA1YAL005C YPR114WQ06107 315 aa13.5□□□□□ -0.25
SSA1YAL005C LCB5Q06147 687 aaKnown RBP13.5□□□□□ -0.25
SSA1YAL005C SLP1Q12232 587 aa13.5□□□□□ -0.25
SSA1YAL005C BEM1P29366 551 aa13.49□□□□□ -0.25
SSA1YAL005C RGI2P40188 164 aa13.49□□□□□ -0.25
SSA1YAL005C SIP4P46954 829 aa13.49□□□□□ -0.25
SSA1YAL005C PMA2P19657 947 aa13.49□□□□□ -0.25
SSA1YAL005C SEC14P24280 304 aaKnown RBP13.49□□□□□ -0.25
SSA1YAL005C OSW5P40219 148 aa13.49□□□□□ -0.25
SSA1YAL005C RPL34BP40525 121 aaKnown RBP13.49□□□□□ -0.25
SSA1YAL005C MNT2P53059 558 aa13.49□□□□□ -0.25
SSA1YAL005C LSC1P53598 329 aaKnown RBP13.49□□□□□ -0.25
SSA1YAL005C NCA2Q12374 616 aa13.49□□□□□ -0.25
SSA1YAL005C FUS1P11710 512 aa13.48□□□□□ -0.25
SSA1YAL005C MNE1P24720 663 aa13.48□□□□□ -0.25
SSA1YAL005C CYM1P32898 989 aa13.48□□□□□ -0.25
SSA1YAL005C PXA2P34230 853 aa13.48□□□□□ -0.25
SSA1YAL005C IRS4P36115 615 aaKnown RBP13.48□□□□□ -0.25
SSA1YAL005C RSM7P47150 247 aa13.48□□□□□ -0.25
SSA1YAL005C UTP13Q05946 817 aaKnown RBP13.48□□□□□ -0.25
SSA1YAL005C RSC2Q06488 889 aa13.48□□□□□ -0.25
SSA1YAL005C YLR053CQ12026 108 aa13.48□□□□□ -0.25
SSA1YAL005C GLN4P13188 809 aaKnown RBP13.47□□□□□ -0.25
SSA1YAL005C IMP3P32899 183 aaPredicted RBP13.47□□□□□ -0.25
SSA1YAL005C REV7P38927 245 aa13.47□□□□□ -0.25
SSA1YAL005C YJR124CP47159 448 aa13.47□□□□□ -0.25
SSA1YAL005C NMA2P53204 395 aa13.47□□□□□ -0.25
SSA1YAL005C BUD32P53323 261 aa13.47□□□□□ -0.25
SSA1YAL005C EFM6P53970 246 aa13.47□□□□□ -0.25
SSA1YAL005C RPN9Q04062 393 aaKnown RBP13.47□□□□□ -0.25
SSA1YAL005C AMD1P15274 810 aaKnown RBP13.47□□□□□ -0.25
SSA1YAL005C MSH1P25846 959 aa13.47□□□□□ -0.25
SSA1YAL005C GND1P38720 489 aaKnown RBP13.47□□□□□ -0.25
SSA1YAL005C YJL107CP42947 387 aa13.47□□□□□ -0.25
SSA1YAL005C RNY1Q02933 434 aaKnown RBP13.47□□□□□ -0.25
SSA1YAL005C MCP2Q06567 569 aa13.47□□□□□ -0.25
SSA1YAL005C VHS3Q08438 674 aa13.47□□□□□ -0.25
SSA1YAL005C NSP1P14907 823 aaKnown RBP13.46□□□□□ -0.25
SSA1YAL005C BEM3P32873 1128 aa13.46□□□□□ -0.25
SSA1YAL005C CTF13P35203 478 aa13.46□□□□□ -0.25
SSA1YAL005C PHO11P35842 467 aa13.46□□□□□ -0.25
SSA1YAL005C PHO12P38693 467 aa13.46□□□□□ -0.25
SSA1YAL005C GLG2P47011 380 aa13.46□□□□□ -0.25
SSA1YAL005C PEX8P53248 589 aa13.46□□□□□ -0.25
Retrieved 100 of 5,963 RNA–protein pairs in 75 ms