RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 TRPC5Q9UL62 973 aaPredicted RBP19.49■□□□□ 0.71
PHGDH-229ENST00000641891 XBP1P17861 261 aa19.49■□□□□ 0.71
PHGDH-229ENST00000641891 C12orf60Q5U649 245 aa19.49■□□□□ 0.71
PHGDH-229ENST00000641891 NPY5RQ15761 445 aa19.48■□□□□ 0.71
PHGDH-229ENST00000641891 CRY2Q49AN0 593 aa19.48■□□□□ 0.71
PHGDH-229ENST00000641891 USP49Q70CQ1 688 aa19.48■□□□□ 0.71
PHGDH-229ENST00000641891 CTCFLQ8NI51 663 aaPredicted RBP19.48■□□□□ 0.71
PHGDH-229ENST00000641891 ZBTB22O15209 634 aa19.47■□□□□ 0.71
PHGDH-229ENST00000641891 VEGFAP15692 232 aaPredicted RBP19.47■□□□□ 0.71
PHGDH-229ENST00000641891 TFAP4Q01664 338 aa19.47■□□□□ 0.71
PHGDH-229ENST00000641891 FILIP1Q7Z7B0 1213 aa19.47■□□□□ 0.71
PHGDH-229ENST00000641891 IL17RBQ9NRM6 502 aa19.47■□□□□ 0.71
PHGDH-229ENST00000641891 POLR2DO15514 142 aaKnown RBP19.47■□□□□ 0.71
PHGDH-229ENST00000641891 ST5P78524 1137 aa19.47■□□□□ 0.71
PHGDH-229ENST00000641891 CERKQ8TCT0 537 aa19.47■□□□□ 0.71
PHGDH-229ENST00000641891 TGFBRAP1Q8WUH2 860 aa19.47■□□□□ 0.71
PHGDH-229ENST00000641891 CSRNP2Q9H175 543 aa19.47■□□□□ 0.71
PHGDH-229ENST00000641891 PCDHA5Q9Y5H7 936 aa19.47■□□□□ 0.71
PHGDH-229ENST00000641891 SRPRBQ9Y5M8 271 aaKnown RBP19.47■□□□□ 0.71
PHGDH-229ENST00000641891 ADAMTS3O15072 1205 aa19.46■□□□□ 0.71
PHGDH-229ENST00000641891 PRR29P0C7W0 189 aa19.46■□□□□ 0.71
PHGDH-229ENST00000641891 MDM2Q00987 491 aaPredicted RBP19.46■□□□□ 0.71
PHGDH-229ENST00000641891 DDR1Q08345 913 aa19.46■□□□□ 0.71
PHGDH-229ENST00000641891 LRRC8AQ8IWT6 810 aa19.46■□□□□ 0.71
PHGDH-229ENST00000641891 GRAMD1CQ8IYS0 662 aa19.46■□□□□ 0.71
PHGDH-229ENST00000641891 SLC44A5Q8NCS7 719 aa19.46■□□□□ 0.71
PHGDH-229ENST00000641891 CD209Q9NNX6 404 aa19.46■□□□□ 0.71
PHGDH-229ENST00000641891 FAM13BQ9NYF5 915 aa19.46■□□□□ 0.71
PHGDH-229ENST00000641891 IFNKQ9P0W0 207 aa19.46■□□□□ 0.71
PHGDH-229ENST00000641891 SAP30BPQ9UHR5 308 aaKnown RBP19.46■□□□□ 0.71
PHGDH-229ENST00000641891 SERTAD1Q9UHV2 236 aa19.46■□□□□ 0.71
PHGDH-229ENST00000641891 NAV1Q8NEY1 1877 aa19.46■□□□□ 0.71
PHGDH-229ENST00000641891 SMC2O95347 1197 aa19.46■□□□□ 0.71
PHGDH-229ENST00000641891 TMED8Q6PL24 325 aaPredicted RBP19.46■□□□□ 0.71
PHGDH-229ENST00000641891 PDILTQ8N807 584 aa19.46■□□□□ 0.71
PHGDH-229ENST00000641891 TNFRSF25Q93038 417 aa19.46■□□□□ 0.71
PHGDH-229ENST00000641891 XPO4Q9C0E2 1151 aaKnown RBP19.46■□□□□ 0.71
PHGDH-229ENST00000641891 HSD3B7Q9H2F3 369 aa19.46■□□□□ 0.71
PHGDH-229ENST00000641891 CEP131Q9UPN4 1083 aa19.46■□□□□ 0.71
PHGDH-229ENST00000641891 TRIM75PA6NK02 468 aa19.45■□□□□ 0.7
PHGDH-229ENST00000641891 LMOD1P29536 600 aaPredicted RBP19.45■□□□□ 0.7
PHGDH-229ENST00000641891 GSTO1P78417 241 aa19.45■□□□□ 0.7
PHGDH-229ENST00000641891 C15orf52Q6ZUT6 534 aaKnown RBP19.45■□□□□ 0.7
PHGDH-229ENST00000641891 MAPKAPK5Q8IW41 473 aa19.45■□□□□ 0.7
PHGDH-229ENST00000641891 RTFDC1Q9BY42 306 aaPredicted RBP19.45■□□□□ 0.7
PHGDH-229ENST00000641891 GGA1Q9UJY5 639 aa19.45■□□□□ 0.7
PHGDH-229ENST00000641891 USP17L3A6NCW0 530 aa19.44■□□□□ 0.7
PHGDH-229ENST00000641891 USP17L4A6NCW7 530 aa19.44■□□□□ 0.7
PHGDH-229ENST00000641891 TRIM37O94972 964 aa19.44■□□□□ 0.7
PHGDH-229ENST00000641891 BMP6P22004 513 aa19.44■□□□□ 0.7
PHGDH-229ENST00000641891 PLCD1P51178 756 aa19.44■□□□□ 0.7
PHGDH-229ENST00000641891 USP17L1Q7RTZ2 530 aa19.44■□□□□ 0.7
PHGDH-229ENST00000641891 RBM17Q96I25 401 aaKnown RBP19.44■□□□□ 0.7
PHGDH-229ENST00000641891 BAZ2BQ9UIF8 2168 aaKnown RBP19.44■□□□□ 0.7
PHGDH-229ENST00000641891 SMTNL1A8MU46 457 aa19.44■□□□□ 0.7
PHGDH-229ENST00000641891 BAG3O95817 575 aa19.44■□□□□ 0.7
PHGDH-229ENST00000641891 ATP1A3P13637 1013 aa19.44■□□□□ 0.7
PHGDH-229ENST00000641891 ZNF579Q8NAF0 562 aaKnown RBP19.44■□□□□ 0.7
PHGDH-229ENST00000641891 KAT14Q9H8E8 782 aa19.44■□□□□ 0.7
PHGDH-229ENST00000641891 QTRT2Q9H974 415 aaKnown RBP19.44■□□□□ 0.7
PHGDH-229ENST00000641891 SCG2P13521 617 aa19.43■□□□□ 0.7
PHGDH-229ENST00000641891 ATP2B4P23634 1241 aa19.43■□□□□ 0.7
PHGDH-229ENST00000641891 BTDP43251 543 aa19.43■□□□□ 0.7
PHGDH-229ENST00000641891 ZNF174Q15697 407 aa19.43■□□□□ 0.7
PHGDH-229ENST00000641891 ROBO3Q96MS0 1386 aa19.43■□□□□ 0.7
PHGDH-229ENST00000641891 MKNK2Q9HBH9 465 aa19.43■□□□□ 0.7
PHGDH-229ENST00000641891 POLLQ9UGP5 575 aa19.43■□□□□ 0.7
PHGDH-229ENST00000641891 IKBKBO14920 756 aa19.43■□□□□ 0.7
PHGDH-229ENST00000641891 PPP4CP60510 307 aa19.43■□□□□ 0.7
PHGDH-229ENST00000641891 POSTNQ15063 836 aa19.43■□□□□ 0.7
PHGDH-229ENST00000641891 STAG2Q8N3U4 1231 aa19.43■□□□□ 0.7
PHGDH-229ENST00000641891 NOL10Q9BSC4 688 aaKnown RBP19.43■□□□□ 0.7
PHGDH-229ENST00000641891 BRMS1Q9HCU9 246 aa19.43■□□□□ 0.7
PHGDH-229ENST00000641891 MAN1B1Q9UKM7 699 aa19.43■□□□□ 0.7
PHGDH-229ENST00000641891 A0A087X0B3 334 aa19.42■□□□□ 0.7
PHGDH-229ENST00000641891 ACTN4O43707 911 aaKnown RBP19.42■□□□□ 0.7
PHGDH-229ENST00000641891 TPM4P67936 248 aa19.42■□□□□ 0.7
PHGDH-229ENST00000641891 PFKFB3Q16875 520 aaPredicted RBP19.42■□□□□ 0.7
PHGDH-229ENST00000641891 PNMA1Q8ND90 353 aa19.42■□□□□ 0.7
PHGDH-229ENST00000641891 EPSTI1Q96J88 318 aa19.42■□□□□ 0.7
PHGDH-229ENST00000641891 MTMR7Q9Y216 660 aa19.42■□□□□ 0.7
PHGDH-229ENST00000641891 CDK5RAP2Q96SN8 1893 aa19.42■□□□□ 0.7
PHGDH-229ENST00000641891 POLRMTO00411 1230 aaKnown RBP19.42■□□□□ 0.7
PHGDH-229ENST00000641891 IL1R1P14778 569 aa19.42■□□□□ 0.7
PHGDH-229ENST00000641891 NLRP5P59047 1200 aa19.42■□□□□ 0.7
PHGDH-229ENST00000641891 MYRIPQ8NFW9 859 aa19.42■□□□□ 0.7
PHGDH-229ENST00000641891 BRWD3Q6RI45 1802 aa19.41■□□□□ 0.7
PHGDH-229ENST00000641891 CCZ1BP86790 482 aa19.41■□□□□ 0.7
PHGDH-229ENST00000641891 CCZ1P86791 482 aaPredicted RBP19.41■□□□□ 0.7
PHGDH-229ENST00000641891 RBM10P98175 930 aaKnown RBP19.41■□□□□ 0.7
PHGDH-229ENST00000641891 FANCCQ00597 558 aa19.41■□□□□ 0.7
PHGDH-229ENST00000641891 MYL5Q02045 173 aa19.41■□□□□ 0.7
PHGDH-229ENST00000641891 ZNF827Q17R98 1081 aa19.41■□□□□ 0.7
PHGDH-229ENST00000641891 SLC27A3Q5K4L6 730 aa19.41■□□□□ 0.7
PHGDH-229ENST00000641891 TTC38Q5R3I4 469 aa19.41■□□□□ 0.7
PHGDH-229ENST00000641891 TBC1D16Q8TBP0 767 aa19.41■□□□□ 0.7
PHGDH-229ENST00000641891 LDHCP07864 332 aa19.4■□□□□ 0.7
PHGDH-229ENST00000641891 TSPY3P0CV98 308 aa19.4■□□□□ 0.7
PHGDH-229ENST00000641891 TSPY8P0CW00 308 aa19.4■□□□□ 0.7
PHGDH-229ENST00000641891 OLFM4Q6UX06 510 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms