RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 DYNLL1P63167 89 aaKnown RBP11.22□□□□□ -0.61
PHGDH-228ENST00000641847 MIGA2Q7L4E1 593 aa11.22□□□□□ -0.61
PHGDH-228ENST00000641847 LCORLQ8N3X6 602 aa11.22□□□□□ -0.61
PHGDH-228ENST00000641847 DIS3LQ8TF46 1054 aaKnown RBP11.22□□□□□ -0.61
PHGDH-228ENST00000641847 TTC28Q96AY4 2481 aa11.22□□□□□ -0.61
PHGDH-228ENST00000641847 NOL10Q9BSC4 688 aaKnown RBP11.22□□□□□ -0.61
PHGDH-228ENST00000641847 ARMT1Q9H993 441 aa11.22□□□□□ -0.61
PHGDH-228ENST00000641847 AATFQ9NY61 560 aaKnown RBP eCLIP11.22□□□□□ -0.61
PHGDH-228ENST00000641847 DAGLAQ9Y4D2 1042 aa11.22□□□□□ -0.61
PHGDH-228ENST00000641847 NAV1Q8NEY1 1877 aa11.21□□□□□ -0.61
PHGDH-228ENST00000641847 BTDP43251 543 aa11.21□□□□□ -0.61
PHGDH-228ENST00000641847 ZNF697Q5TEC3 545 aa11.21□□□□□ -0.61
PHGDH-228ENST00000641847 KIAA1211Q6ZU35 1233 aa11.21□□□□□ -0.61
PHGDH-228ENST00000641847 ZDHHC15Q96MV8 337 aa11.21□□□□□ -0.61
PHGDH-228ENST00000641847 RIOK1Q9BRS2 568 aaKnown RBP11.21□□□□□ -0.61
PHGDH-228ENST00000641847 MRIQ9BWK5 157 aa11.21□□□□□ -0.61
PHGDH-228ENST00000641847 LSG1Q9H089 658 aaKnown RBP11.21□□□□□ -0.61
PHGDH-228ENST00000641847 HMX1Q9NP08 348 aaPredicted RBP11.21□□□□□ -0.61
PHGDH-228ENST00000641847 ZSWIM8A7E2V4 1837 aa11.21□□□□□ -0.62
PHGDH-228ENST00000641847 GPR75-ASB3A0A0A6YYF3 556 aa11.2□□□□□ -0.62
PHGDH-228ENST00000641847 POTEB2H3BUK9 544 aa11.2□□□□□ -0.62
PHGDH-228ENST00000641847 BAG3O95817 575 aa11.2□□□□□ -0.62
PHGDH-228ENST00000641847 HMGCRP04035 888 aa11.2□□□□□ -0.62
PHGDH-228ENST00000641847 INPP5BP32019 993 aa11.2□□□□□ -0.62
PHGDH-228ENST00000641847 VPS53Q5VIR6 699 aa11.2□□□□□ -0.62
PHGDH-228ENST00000641847 HHIPL2Q6UWX4 724 aa11.2□□□□□ -0.62
PHGDH-228ENST00000641847 SH3RF3Q8TEJ3 882 aaPredicted RBP11.2□□□□□ -0.62
PHGDH-228ENST00000641847 FAM163AQ96GL9 167 aaPredicted RBP11.2□□□□□ -0.62
PHGDH-228ENST00000641847 STRBPQ96SI9 672 aaKnown RBP11.2□□□□□ -0.62
PHGDH-228ENST00000641847 LBHD1Q9BQE6 289 aaPredicted RBP11.2□□□□□ -0.62
PHGDH-228ENST00000641847 UPF2Q9HAU5 1272 aaKnown RBP11.2□□□□□ -0.62
PHGDH-228ENST00000641847 PICK1Q9NRD5 415 aa11.2□□□□□ -0.62
PHGDH-228ENST00000641847 SLC45A1Q9Y2W3 748 aa11.2□□□□□ -0.62
PHGDH-228ENST00000641847 CDK5RAP2Q96SN8 1893 aa11.2□□□□□ -0.62
PHGDH-228ENST00000641847 FOCADQ5VW36 1801 aa11.2□□□□□ -0.62
PHGDH-228ENST00000641847 DDX60LQ5H9U9 1706 aaKnown RBP11.2□□□□□ -0.62
PHGDH-228ENST00000641847 RPAP1Q9BWH6 1393 aaPredicted RBP11.19□□□□□ -0.62
PHGDH-228ENST00000641847 LAMA4Q16363 1823 aa11.19□□□□□ -0.62
PHGDH-228ENST00000641847 GNAT2P19087 354 aa11.19□□□□□ -0.62
PHGDH-228ENST00000641847 COL9A1P20849 921 aa11.19□□□□□ -0.62
PHGDH-228ENST00000641847 PPP4CP60510 307 aa11.19□□□□□ -0.62
PHGDH-228ENST00000641847 NOL9Q5SY16 702 aaKnown RBP11.19□□□□□ -0.62
PHGDH-228ENST00000641847 GADL1Q6ZQY3 521 aa11.19□□□□□ -0.62
PHGDH-228ENST00000641847 FAM161BQ96MY7 647 aa11.19□□□□□ -0.62
PHGDH-228ENST00000641847 GUCD1Q96NT3 240 aa11.19□□□□□ -0.62
PHGDH-228ENST00000641847 CRNKL1Q9BZJ0 848 aaKnown RBP11.19□□□□□ -0.62
PHGDH-228ENST00000641847 PNMA3Q9UL41 463 aa11.19□□□□□ -0.62
PHGDH-228ENST00000641847 SLC4A4Q9Y6R1 1079 aa11.19□□□□□ -0.62
PHGDH-228ENST00000641847 FOXP2O15409 715 aa11.18□□□□□ -0.62
PHGDH-228ENST00000641847 PRKAB2O43741 272 aa11.18□□□□□ -0.62
PHGDH-228ENST00000641847 HSPD1P10809 573 aaKnown RBP11.18□□□□□ -0.62
PHGDH-228ENST00000641847 PLCG2P16885 1265 aa11.18□□□□□ -0.62
PHGDH-228ENST00000641847 PTH1RQ03431 593 aa11.18□□□□□ -0.62
PHGDH-228ENST00000641847 MOGSQ13724 837 aa11.18□□□□□ -0.62
PHGDH-228ENST00000641847 APOBEC3HQ6NTF7 200 aaKnown RBP11.18□□□□□ -0.62
PHGDH-228ENST00000641847 GPAT2Q6NUI2 795 aa11.18□□□□□ -0.62
PHGDH-228ENST00000641847 CERS3Q8IU89 383 aa11.18□□□□□ -0.62
PHGDH-228ENST00000641847 TEX11Q8IYF3 940 aa11.18□□□□□ -0.62
PHGDH-228ENST00000641847 MAFAQ8NHW3 353 aaPredicted RBP11.18□□□□□ -0.62
PHGDH-228ENST00000641847 SDR42E1Q8WUS8 393 aa11.18□□□□□ -0.62
PHGDH-228ENST00000641847 FAM151AQ8WW52 585 aa11.18□□□□□ -0.62
PHGDH-228ENST00000641847 DSCC1Q9BVC3 393 aa11.18□□□□□ -0.62
PHGDH-228ENST00000641847 EPB41L4AQ9HCS5 686 aaPredicted RBP11.18□□□□□ -0.62
PHGDH-228ENST00000641847 ZNF112Q9UJU3 913 aa11.18□□□□□ -0.62
PHGDH-228ENST00000641847 RBM8AQ9Y5S9 174 aaKnown RBP11.18□□□□□ -0.62
PHGDH-228ENST00000641847 ZHX2Q9Y6X8 837 aa11.18□□□□□ -0.62
PHGDH-228ENST00000641847 A0A0G2JLL6 359 aaPredicted RBP11.17□□□□□ -0.62
PHGDH-228ENST00000641847 EPB41L2O43491 1005 aaKnown RBP11.17□□□□□ -0.62
PHGDH-228ENST00000641847 APPP05067 770 aa11.17□□□□□ -0.62
PHGDH-228ENST00000641847 RHBDL3P58872 404 aa11.17□□□□□ -0.62
PHGDH-228ENST00000641847 MDM2Q00987 491 aaPredicted RBP11.17□□□□□ -0.62
PHGDH-228ENST00000641847 PRRT2Q7Z6L0 340 aaPredicted RBP11.17□□□□□ -0.62
PHGDH-228ENST00000641847 USP26Q9BXU7 913 aa11.17□□□□□ -0.62
PHGDH-228ENST00000641847 NACAP1Q9BZK3 213 aa11.17□□□□□ -0.62
PHGDH-228ENST00000641847 USP40Q9NVE5 1235 aa11.17□□□□□ -0.62
PHGDH-228ENST00000641847 PRKAG2Q9UGJ0 569 aa11.17□□□□□ -0.62
PHGDH-228ENST00000641847 OGDHLQ9ULD0 1010 aa11.17□□□□□ -0.62
PHGDH-228ENST00000641847 U3KPZ7 1027 aaPredicted RBP11.17□□□□□ -0.62
PHGDH-228ENST00000641847 ZMYM6O95789 1325 aa11.16□□□□□ -0.62
PHGDH-228ENST00000641847 BAZ2AQ9UIF9 1905 aaKnown RBP11.16□□□□□ -0.62
PHGDH-228ENST00000641847 PATL2C9JE40 543 aaKnown RBP11.16□□□□□ -0.62
PHGDH-228ENST00000641847 MCCP23508 829 aa11.16□□□□□ -0.62
PHGDH-228ENST00000641847 USP5P45974 858 aa11.16□□□□□ -0.62
PHGDH-228ENST00000641847 TDO2P48775 406 aa11.16□□□□□ -0.62
PHGDH-228ENST00000641847 TCP10Q12799 353 aa11.16□□□□□ -0.62
PHGDH-228ENST00000641847 FAM110CQ1W6H9 321 aa11.16□□□□□ -0.62
PHGDH-228ENST00000641847 CDC42EP5Q6NZY7 148 aa11.16□□□□□ -0.62
PHGDH-228ENST00000641847 SCYL3Q8IZE3 742 aa11.16□□□□□ -0.62
PHGDH-228ENST00000641847 IFNL3Q8IZI9 196 aa11.16□□□□□ -0.62
PHGDH-228ENST00000641847 ANKRD13CQ8N6S4 541 aa11.16□□□□□ -0.62
PHGDH-228ENST00000641847 MAP4K1Q92918 833 aa11.16□□□□□ -0.62
PHGDH-228ENST00000641847 C22orf23Q9BZE7 217 aa11.16□□□□□ -0.62
PHGDH-228ENST00000641847 CDH23Q9H251 3354 aa11.16□□□□□ -0.62
PHGDH-228ENST00000641847 FLT1P17948 1338 aa11.15□□□□□ -0.62
PHGDH-228ENST00000641847 GSG1L2A8MUP6 293 aa11.15□□□□□ -0.62
PHGDH-228ENST00000641847 PABPC4Q13310 644 aaKnown RBP eCLIP11.15□□□□□ -0.62
PHGDH-228ENST00000641847 PICALMQ13492 652 aa11.15□□□□□ -0.62
PHGDH-228ENST00000641847 MAPKAPK5Q8IW41 473 aa11.15□□□□□ -0.62
PHGDH-228ENST00000641847 TGFBRAP1Q8WUH2 860 aa11.15□□□□□ -0.62
PHGDH-228ENST00000641847 FAM122AQ96E09 287 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms