RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 SOCS4Q8WXH5 440 aa20.27■□□□□ 0.84
PHGDH-213ENST00000641272 KIF1BPQ96EK5 621 aa20.27■□□□□ 0.84
PHGDH-213ENST00000641272 CWC22Q9HCG8 908 aaKnown RBP20.27■□□□□ 0.84
PHGDH-213ENST00000641272 HMX1Q9NP08 348 aaPredicted RBP20.27■□□□□ 0.84
PHGDH-213ENST00000641272 NR2E3Q9Y5X4 410 aa20.27■□□□□ 0.84
PHGDH-213ENST00000641272 EVI5O60447 810 aa20.26■□□□□ 0.83
PHGDH-213ENST00000641272 CYP2D6P10635 497 aa20.26■□□□□ 0.83
PHGDH-213ENST00000641272 PRKAR2AP13861 404 aaKnown RBP20.26■□□□□ 0.83
PHGDH-213ENST00000641272 ZKSCAN1P17029 563 aaPredicted RBP20.26■□□□□ 0.83
PHGDH-213ENST00000641272 VCAM1P19320 739 aa20.26■□□□□ 0.83
PHGDH-213ENST00000641272 TTF1Q15361 905 aaPredicted RBP20.26■□□□□ 0.83
PHGDH-213ENST00000641272 WDR78Q5VTH9 848 aa20.26■□□□□ 0.83
PHGDH-213ENST00000641272 GPR142Q7Z601 462 aa20.26■□□□□ 0.83
PHGDH-213ENST00000641272 C12orf42Q96LP6 360 aa20.26■□□□□ 0.83
PHGDH-213ENST00000641272 NUDT12Q9BQG2 462 aa20.26■□□□□ 0.83
PHGDH-213ENST00000641272 CRNKL1Q9BZJ0 848 aaKnown RBP20.26■□□□□ 0.83
PHGDH-213ENST00000641272 MCM9Q9NXL9 1143 aa20.26■□□□□ 0.83
PHGDH-213ENST00000641272 DDX19BQ9UMR2 479 aa20.26■□□□□ 0.83
PHGDH-213ENST00000641272 RPTORQ8N122 1335 aa20.26■□□□□ 0.83
PHGDH-213ENST00000641272 MPHOSPH10O00566 681 aaKnown RBP20.25■□□□□ 0.83
PHGDH-213ENST00000641272 HMMRO75330 724 aa20.25■□□□□ 0.83
PHGDH-213ENST00000641272 CNMDO75829 334 aa20.25■□□□□ 0.83
PHGDH-213ENST00000641272 MS4A1P11836 297 aa20.25■□□□□ 0.83
PHGDH-213ENST00000641272 MAPK4P31152 587 aa20.25■□□□□ 0.83
PHGDH-213ENST00000641272 SEPT2Q15019 361 aa20.25■□□□□ 0.83
PHGDH-213ENST00000641272 CCL14Q16627 93 aa20.25■□□□□ 0.83
PHGDH-213ENST00000641272 C7orf61Q8IZ16 206 aa20.25■□□□□ 0.83
PHGDH-213ENST00000641272 SLC44A5Q8NCS7 719 aa20.25■□□□□ 0.83
PHGDH-213ENST00000641272 ARMT1Q9H993 441 aa20.25■□□□□ 0.83
PHGDH-213ENST00000641272 CABP5Q9NP86 173 aa20.25■□□□□ 0.83
PHGDH-213ENST00000641272 A0A0G2JMZ2 1700 aa20.24■□□□□ 0.83
PHGDH-213ENST00000641272 GUCY1A2P33402 732 aa20.24■□□□□ 0.83
PHGDH-213ENST00000641272 NECAB2Q7Z6G3 386 aa20.24■□□□□ 0.83
PHGDH-213ENST00000641272 GTF3C2Q8WUA4 911 aaPredicted RBP20.24■□□□□ 0.83
PHGDH-213ENST00000641272 BOLA2Q9H3K6 86 aa20.24■□□□□ 0.83
PHGDH-213ENST00000641272 ZBTB40Q9NUA8 1239 aa20.24■□□□□ 0.83
PHGDH-213ENST00000641272 TCRBV5S4A2TA0A5A2 114 aa20.23■□□□□ 0.83
PHGDH-213ENST00000641272 USP17L15C9J2P7 530 aa20.23■□□□□ 0.83
PHGDH-213ENST00000641272 USP17L13C9JLJ4 530 aa20.23■□□□□ 0.83
PHGDH-213ENST00000641272 USP17L11C9JVI0 530 aa20.23■□□□□ 0.83
PHGDH-213ENST00000641272 USP17L18D6R9N7 530 aa20.23■□□□□ 0.83
PHGDH-213ENST00000641272 USP17L22D6RA61 530 aa20.23■□□□□ 0.83
PHGDH-213ENST00000641272 USP17L17D6RBQ6 530 aa20.23■□□□□ 0.83
PHGDH-213ENST00000641272 USP17L19D6RCP7 530 aa20.23■□□□□ 0.83
PHGDH-213ENST00000641272 USP17L20D6RJB6 530 aa20.23■□□□□ 0.83
PHGDH-213ENST00000641272 CHGBP05060 677 aa20.23■□□□□ 0.83
PHGDH-213ENST00000641272 USP17L24Q0WX57 530 aa20.23■□□□□ 0.83
PHGDH-213ENST00000641272 PLEKHH3Q7Z736 793 aa20.23■□□□□ 0.83
PHGDH-213ENST00000641272 CLEC10AQ8IUN9 316 aa20.23■□□□□ 0.83
PHGDH-213ENST00000641272 RPAP2Q8IXW5 612 aaPredicted RBP20.23■□□□□ 0.83
PHGDH-213ENST00000641272 APBA2Q99767 749 aa20.23■□□□□ 0.83
PHGDH-213ENST00000641272 KIAA1683Q9H0B3 1180 aa20.23■□□□□ 0.83
PHGDH-213ENST00000641272 RPAP3Q9H6T3 665 aaPredicted RBP20.23■□□□□ 0.83
PHGDH-213ENST00000641272 MBD4O95243 580 aa20.22■□□□□ 0.83
PHGDH-213ENST00000641272 RGS2P41220 211 aa20.22■□□□□ 0.83
PHGDH-213ENST00000641272 USP14P54578 494 aa20.22■□□□□ 0.83
PHGDH-213ENST00000641272 GABPAQ06546 454 aa20.22■□□□□ 0.83
PHGDH-213ENST00000641272 C20orf194Q5TEA3 1177 aa20.22■□□□□ 0.83
PHGDH-213ENST00000641272 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.22■□□□□ 0.83
PHGDH-213ENST00000641272 DCP1AQ9NPI6 582 aaPredicted RBP20.22■□□□□ 0.83
PHGDH-213ENST00000641272 PAG1Q9NWQ8 432 aa20.22■□□□□ 0.83
PHGDH-213ENST00000641272 ZMYND8Q9ULU4 1186 aaPredicted RBP20.22■□□□□ 0.83
PHGDH-213ENST00000641272 SPDYE16A6NNV3 312 aaPredicted RBP20.21■□□□□ 0.83
PHGDH-213ENST00000641272 PRKAB2O43741 272 aa20.21■□□□□ 0.83
PHGDH-213ENST00000641272 CCND3P30281 292 aaPredicted RBP20.21■□□□□ 0.83
PHGDH-213ENST00000641272 MORN1Q5T089 497 aa20.21■□□□□ 0.83
PHGDH-213ENST00000641272 MAP3K21Q5TCX8 1036 aa20.21■□□□□ 0.83
PHGDH-213ENST00000641272 TMED8Q6PL24 325 aaPredicted RBP20.21■□□□□ 0.83
PHGDH-213ENST00000641272 CATSPERGQ6ZRH7 1159 aa20.21■□□□□ 0.83
PHGDH-213ENST00000641272 USP6NLQ92738 828 aa20.21■□□□□ 0.83
PHGDH-213ENST00000641272 DYNLL2Q96FJ2 89 aa20.21■□□□□ 0.83
PHGDH-213ENST00000641272 BTBD7Q9P203 1132 aa20.21■□□□□ 0.83
PHGDH-213ENST00000641272 RCAN3Q9UKA8 241 aa20.21■□□□□ 0.83
PHGDH-213ENST00000641272 A0A1W2PRG0 241 aa20.2■□□□□ 0.82
PHGDH-213ENST00000641272 SMIM22K7EJ46 135 aa20.2■□□□□ 0.82
PHGDH-213ENST00000641272 MNX1P50219 401 aaPredicted RBP20.2■□□□□ 0.82
PHGDH-213ENST00000641272 CACNB2Q08289 660 aaPredicted RBP20.2■□□□□ 0.82
PHGDH-213ENST00000641272 ANKLE1Q8NAG6 615 aa20.2■□□□□ 0.82
PHGDH-213ENST00000641272 PRO3102Q9H379 93 aa20.2■□□□□ 0.82
PHGDH-213ENST00000641272 C11orf49Q9H6J7 331 aa20.2■□□□□ 0.82
PHGDH-213ENST00000641272 RABGAP1Q9Y3P9 1069 aa20.2■□□□□ 0.82
PHGDH-213ENST00000641272 PARP14Q460N5 1801 aa20.2■□□□□ 0.82
PHGDH-213ENST00000641272 RLFQ13129 1914 aa20.19■□□□□ 0.82
PHGDH-213ENST00000641272 RANBP2P49792 3224 aaKnown RBP20.19■□□□□ 0.82
PHGDH-213ENST00000641272 CYP2D7A0A087X1C5 515 aa20.19■□□□□ 0.82
PHGDH-213ENST00000641272 SMARCA5O60264 1052 aaPredicted RBP20.19■□□□□ 0.82
PHGDH-213ENST00000641272 RAB11FIP3O75154 756 aa20.19■□□□□ 0.82
PHGDH-213ENST00000641272 XRCC5P13010 732 aaKnown RBP20.19■□□□□ 0.82
PHGDH-213ENST00000641272 ADD2P35612 726 aa20.19■□□□□ 0.82
PHGDH-213ENST00000641272 TANGO6Q9C0B7 1094 aa20.19■□□□□ 0.82
PHGDH-213ENST00000641272 NBPF3Q9H094 633 aa20.19■□□□□ 0.82
PHGDH-213ENST00000641272 STAP2Q9UGK3 403 aa20.19■□□□□ 0.82
PHGDH-213ENST00000641272 ZNF236Q9UL36 1845 aa20.18■□□□□ 0.82
PHGDH-213ENST00000641272 AKR1B1P15121 316 aa20.18■□□□□ 0.82
PHGDH-213ENST00000641272 SYN1P17600 705 aa20.18■□□□□ 0.82
PHGDH-213ENST00000641272 CCNA1P78396 465 aa20.18■□□□□ 0.82
PHGDH-213ENST00000641272 MAP2K5Q13163 448 aa20.18■□□□□ 0.82
PHGDH-213ENST00000641272 SAMD1Q6SPF0 538 aaPredicted RBP20.18■□□□□ 0.82
PHGDH-213ENST00000641272 FLRT1Q9NZU1 646 aa20.18■□□□□ 0.82
PHGDH-213ENST00000641272 OGDHLQ9ULD0 1010 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms