RNA–Protein interactions for RNA: ENST00000640931.1

RTTN-223, Transcript of rotatin, human

TSL 5

Gene RTTN, Length 2,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTTN-223	ENST00000640931	NEMF	O60524	1076 aa		9.01	□□□□□ -0.97
RTTN-223	ENST00000640931	TAF5L	O75529	589 aa		9.01	□□□□□ -0.97
RTTN-223	ENST00000640931	PTGS1	P23219	599 aa		9.01	□□□□□ -0.97
RTTN-223	ENST00000640931	CTSW	P56202	376 aa		9.01	□□□□□ -0.97
RTTN-223	ENST00000640931	ERCC6L	Q2NKX8	1250 aa		9.01	□□□□□ -0.97
RTTN-223	ENST00000640931	ARHGAP29	Q52LW3	1261 aa		9.01	□□□□□ -0.97
RTTN-223	ENST00000640931	C16orf87	Q6PH81	154 aa		9.01	□□□□□ -0.97
RTTN-223	ENST00000640931	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	9.01	□□□□□ -0.97
RTTN-223	ENST00000640931	OR8K1	Q8NGG5	319 aa		9.01	□□□□□ -0.97
RTTN-223	ENST00000640931	LRRC2	Q9BYS8	371 aa		9.01	□□□□□ -0.97
RTTN-223	ENST00000640931	KCND1	Q9NSA2	647 aa		9.01	□□□□□ -0.97
RTTN-223	ENST00000640931	SRP68	Q9UHB9	627 aa	Known RBP	9.01	□□□□□ -0.97
RTTN-223	ENST00000640931	NSFL1C	Q9UNZ2	370 aa	Known RBP	9.01	□□□□□ -0.97
RTTN-223	ENST00000640931	RIC1	Q4ADV7	1423 aa		9.01	□□□□□ -0.97
RTTN-223	ENST00000640931	MED23	Q9ULK4	1368 aa		9.01	□□□□□ -0.97
RTTN-223	ENST00000640931	SHTN1	A0MZ66	631 aa		9.01	□□□□□ -0.97
RTTN-223	ENST00000640931	PDLIM1	O00151	329 aa		9.01	□□□□□ -0.97
RTTN-223	ENST00000640931	FES	P07332	822 aa		9.01	□□□□□ -0.97
RTTN-223	ENST00000640931	IFIT1	P09914	478 aa	Known RBP	9.01	□□□□□ -0.97
RTTN-223	ENST00000640931	IL6ST	P40189	918 aa	Predicted RBP	9.01	□□□□□ -0.97
RTTN-223	ENST00000640931	ZAP70	P43403	619 aa		9.01	□□□□□ -0.97
RTTN-223	ENST00000640931	TRPC1	P48995	793 aa		9.01	□□□□□ -0.97
RTTN-223	ENST00000640931	SESN3	P58005	492 aa		9.01	□□□□□ -0.97
RTTN-223	ENST00000640931	TRIM28	Q13263	835 aa	Known RBP	9.01	□□□□□ -0.97
RTTN-223	ENST00000640931	IFIT5	Q13325	482 aa	Known RBP	9.01	□□□□□ -0.97
RTTN-223	ENST00000640931	CCDC158	Q5M9N0	1113 aa		9.01	□□□□□ -0.97
RTTN-223	ENST00000640931	SFMBT2	Q5VUG0	894 aa		9.01	□□□□□ -0.97
RTTN-223	ENST00000640931	MYSM1	Q5VVJ2	828 aa		9.01	□□□□□ -0.97
RTTN-223	ENST00000640931	BARGIN	Q6ZT62	677 aa		9.01	□□□□□ -0.97
RTTN-223	ENST00000640931	AMOTL1	Q8IY63	956 aa		9.01	□□□□□ -0.97
RTTN-223	ENST00000640931	CACTIN-AS1	Q8N1I8	211 aa		9.01	□□□□□ -0.97
RTTN-223	ENST00000640931	MAP4K1	Q92918	833 aa		9.01	□□□□□ -0.97
RTTN-223	ENST00000640931	TSPYL2	Q9H2G4	693 aa	Predicted RBP	9.01	□□□□□ -0.97
RTTN-223	ENST00000640931	TRPV5	Q9NQA5	729 aa		9.01	□□□□□ -0.97
RTTN-223	ENST00000640931	PAG1	Q9NWQ8	432 aa		9.01	□□□□□ -0.97
RTTN-223	ENST00000640931	ORC3	Q9UBD5	711 aa	Predicted RBP	9.01	□□□□□ -0.97
RTTN-223	ENST00000640931	BIN2	Q9UBW5	565 aa	Predicted RBP	9.01	□□□□□ -0.97
RTTN-223	ENST00000640931	USP21	Q9UK80	565 aa		9.01	□□□□□ -0.97
RTTN-223	ENST00000640931	THRAP3	Q9Y2W1	955 aa	Known RBP	9.01	□□□□□ -0.97
RTTN-223	ENST00000640931	ATXN2	Q99700	1313 aa	Known RBP	9.01	□□□□□ -0.97
RTTN-223	ENST00000640931	KIF5C	O60282	957 aa		9	□□□□□ -0.97
RTTN-223	ENST00000640931	ZBED6	P86452	979 aa		9	□□□□□ -0.97
RTTN-223	ENST00000640931	PRPF4B	Q13523	1007 aa	Known RBP	9	□□□□□ -0.97
RTTN-223	ENST00000640931	RRP12	Q5JTH9	1297 aa	Known RBP	9	□□□□□ -0.97
RTTN-223	ENST00000640931	METTL24	Q5JXM2	366 aa		9	□□□□□ -0.97
RTTN-223	ENST00000640931	CCDC183	Q5T5S1	534 aa		9	□□□□□ -0.97
RTTN-223	ENST00000640931	LDHAL6A	Q6ZMR3	332 aa		9	□□□□□ -0.97
RTTN-223	ENST00000640931	CCDC83	Q8IWF9	413 aa		9	□□□□□ -0.97
RTTN-223	ENST00000640931	ELOA2	Q8IYF1	753 aa	Predicted RBP	9	□□□□□ -0.97
RTTN-223	ENST00000640931	TSGA10	Q9BZW7	698 aa		9	□□□□□ -0.97
RTTN-223	ENST00000640931	MMADHC	Q9H3L0	296 aa	Predicted RBP	9	□□□□□ -0.97
RTTN-223	ENST00000640931	EP400	Q96L91	3159 aa		9	□□□□□ -0.97
RTTN-223	ENST00000640931	PPFIA3	O75145	1194 aa		9	□□□□□ -0.97
RTTN-223	ENST00000640931	ERLIN1	O75477	346 aa		9	□□□□□ -0.97
RTTN-223	ENST00000640931	RANBP1	P43487	201 aa		9	□□□□□ -0.97
RTTN-223	ENST00000640931	CUL4A	Q13619	759 aa		9	□□□□□ -0.97
RTTN-223	ENST00000640931	VPS72	Q15906	364 aa		9	□□□□□ -0.97
RTTN-223	ENST00000640931	FBXW10	Q5XX13	1052 aa		9	□□□□□ -0.97
RTTN-223	ENST00000640931	STOX1	Q6ZVD7	989 aa		9	□□□□□ -0.97
RTTN-223	ENST00000640931	ARHGAP22	Q7Z5H3	698 aa		9	□□□□□ -0.97
RTTN-223	ENST00000640931	NKX2-3	Q8TAU0	364 aa		9	□□□□□ -0.97
RTTN-223	ENST00000640931	HDAC7	Q8WUI4	952 aa		9	□□□□□ -0.97
RTTN-223	ENST00000640931	RUFY2	Q8WXA3	655 aa		9	□□□□□ -0.97
RTTN-223	ENST00000640931	OSBPL9	Q96SU4	736 aa		9	□□□□□ -0.97
RTTN-223	ENST00000640931	PLA2G12B	Q9BX93	195 aa		9	□□□□□ -0.97
RTTN-223	ENST00000640931	GDPD2	Q9HCC8	539 aa		9	□□□□□ -0.97
RTTN-223	ENST00000640931	CNNM1	Q9NRU3	951 aa		9	□□□□□ -0.97
RTTN-223	ENST00000640931	SPATA7	Q9P0W8	599 aa		9	□□□□□ -0.97
RTTN-223	ENST00000640931	MTMR7	Q9Y216	660 aa		9	□□□□□ -0.97
RTTN-223	ENST00000640931	NIP7	Q9Y221	180 aa	Known RBP eCLIP	9	□□□□□ -0.97
RTTN-223	ENST00000640931	NUP98	P52948	1817 aa		8.99	□□□□□ -0.97
RTTN-223	ENST00000640931		F8VZ95	297 aa		8.99	□□□□□ -0.97
RTTN-223	ENST00000640931	LIG3	P49916	1009 aa		8.99	□□□□□ -0.97
RTTN-223	ENST00000640931	STK3	Q13188	491 aa		8.99	□□□□□ -0.97
RTTN-223	ENST00000640931	ME3	Q16798	604 aa		8.99	□□□□□ -0.97
RTTN-223	ENST00000640931	CCDC93	Q567U6	631 aa		8.99	□□□□□ -0.97
RTTN-223	ENST00000640931	TTC39A	Q5SRH9	613 aa		8.99	□□□□□ -0.97
RTTN-223	ENST00000640931	GORAB	Q5T7V8	394 aa		8.99	□□□□□ -0.97
RTTN-223	ENST00000640931	ZSCAN25	Q6NSZ9	544 aa		8.99	□□□□□ -0.97
RTTN-223	ENST00000640931	CC2D1A	Q6P1N0	951 aa	Predicted RBP	8.99	□□□□□ -0.97
RTTN-223	ENST00000640931	TLDC1	Q6P9B6	456 aa		8.99	□□□□□ -0.97
RTTN-223	ENST00000640931	MICALCL	Q6ZW33	695 aa		8.99	□□□□□ -0.97
RTTN-223	ENST00000640931	MAGEC3	Q8TD91	643 aa		8.99	□□□□□ -0.97
RTTN-223	ENST00000640931	UBXN4	Q92575	508 aa		8.99	□□□□□ -0.97
RTTN-223	ENST00000640931	OSBP2	Q969R2	916 aa		8.99	□□□□□ -0.97
RTTN-223	ENST00000640931	IL17RA	Q96F46	866 aa		8.99	□□□□□ -0.97
RTTN-223	ENST00000640931	CDCA7	Q9BWT1	371 aa	Predicted RBP	8.99	□□□□□ -0.97
RTTN-223	ENST00000640931	ATP6V0A4	Q9HBG4	840 aa		8.99	□□□□□ -0.97
RTTN-223	ENST00000640931	TPCN1	Q9ULQ1	816 aa		8.99	□□□□□ -0.97
RTTN-223	ENST00000640931	TMEM98	Q9Y2Y6	226 aa		8.99	□□□□□ -0.97
RTTN-223	ENST00000640931	PDE8A	O60658	829 aa		8.98	□□□□□ -0.97
RTTN-223	ENST00000640931	E2F6	O75461	281 aa		8.98	□□□□□ -0.97
RTTN-223	ENST00000640931	SASH3	O75995	380 aa		8.98	□□□□□ -0.97
RTTN-223	ENST00000640931	CIAO1	O76071	339 aa		8.98	□□□□□ -0.97
RTTN-223	ENST00000640931	FLT3	P36888	993 aa		8.98	□□□□□ -0.97
RTTN-223	ENST00000640931	PHKA1	P46020	1223 aa		8.98	□□□□□ -0.97
RTTN-223	ENST00000640931	ERFE	Q4G0M1	354 aa		8.98	□□□□□ -0.97
RTTN-223	ENST00000640931	CWF19L1	Q69YN2	538 aa	Known RBP	8.98	□□□□□ -0.97
RTTN-223	ENST00000640931	CCDC80	Q76M96	950 aa		8.98	□□□□□ -0.97
RTTN-223	ENST00000640931	CHST3	Q7LGC8	479 aa		8.98	□□□□□ -0.97

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