RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 MAP2K5Q13163 448 aa10.19□□□□□ -0.78
SCARB2-226ENST00000640916 PLEKHH3Q7Z736 793 aa10.19□□□□□ -0.78
SCARB2-226ENST00000640916 RNPC3Q96LT9 517 aaKnown RBP10.19□□□□□ -0.78
SCARB2-226ENST00000640916 PRDM5Q9NQX1 630 aaPredicted RBP10.19□□□□□ -0.78
SCARB2-226ENST00000640916 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.18□□□□□ -0.78
SCARB2-226ENST00000640916 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.18□□□□□ -0.78
SCARB2-226ENST00000640916 USP17L5A8MUK1 530 aa10.18□□□□□ -0.78
SCARB2-226ENST00000640916 CNMDO75829 334 aa10.18□□□□□ -0.78
SCARB2-226ENST00000640916 CAP2P40123 477 aa10.18□□□□□ -0.78
SCARB2-226ENST00000640916 RHBDL3P58872 404 aa10.18□□□□□ -0.78
SCARB2-226ENST00000640916 PUM3Q15397 648 aaKnown RBP10.18□□□□□ -0.78
SCARB2-226ENST00000640916 C1orf53Q5VUE5 145 aa10.18□□□□□ -0.78
SCARB2-226ENST00000640916 NPLOC4Q8TAT6 608 aa10.18□□□□□ -0.78
SCARB2-226ENST00000640916 EDC3Q96F86 508 aaKnown RBP10.18□□□□□ -0.78
SCARB2-226ENST00000640916 FAM163AQ96GL9 167 aaPredicted RBP10.18□□□□□ -0.78
SCARB2-226ENST00000640916 SNX27Q96L92 541 aa10.18□□□□□ -0.78
SCARB2-226ENST00000640916 WDR18Q9BV38 432 aa10.18□□□□□ -0.78
SCARB2-226ENST00000640916 TBC1D2Q9BYX2 928 aa10.18□□□□□ -0.78
SCARB2-226ENST00000640916 BICC1Q9H694 974 aaKnown RBP10.18□□□□□ -0.78
SCARB2-226ENST00000640916 C11orf16Q9NQ32 467 aa10.18□□□□□ -0.78
SCARB2-226ENST00000640916 C9orf78Q9NZ63 289 aaPredicted RBP10.18□□□□□ -0.78
SCARB2-226ENST00000640916 PIEZO1Q92508 2521 aa10.17□□□□□ -0.78
SCARB2-226ENST00000640916 MSCO60682 206 aa10.17□□□□□ -0.78
SCARB2-226ENST00000640916 ALDH1L1O75891 902 aa10.17□□□□□ -0.78
SCARB2-226ENST00000640916 IFIT1P09914 478 aaKnown RBP10.17□□□□□ -0.78
SCARB2-226ENST00000640916 CYBAP13498 195 aa10.17□□□□□ -0.78
SCARB2-226ENST00000640916 PBX2P40425 430 aa10.17□□□□□ -0.78
SCARB2-226ENST00000640916 IRX3P78415 501 aaPredicted RBP10.17□□□□□ -0.78
SCARB2-226ENST00000640916 TLE2Q04725 743 aa10.17□□□□□ -0.78
SCARB2-226ENST00000640916 PICALMQ13492 652 aa10.17□□□□□ -0.78
SCARB2-226ENST00000640916 MTMR2Q13614 643 aa10.17□□□□□ -0.78
SCARB2-226ENST00000640916 CCDC85BQ15834 202 aaPredicted RBP10.17□□□□□ -0.78
SCARB2-226ENST00000640916 SHROOM1Q2M3G4 852 aaPredicted RBP10.17□□□□□ -0.78
SCARB2-226ENST00000640916 ALYREFQ86V81 257 aaKnown RBP10.17□□□□□ -0.78
SCARB2-226ENST00000640916 ZNF384Q8TF68 577 aa10.17□□□□□ -0.78
SCARB2-226ENST00000640916 TIFAQ96CG3 184 aa10.17□□□□□ -0.78
SCARB2-226ENST00000640916 PRDM12Q9H4Q4 367 aa10.17□□□□□ -0.78
SCARB2-226ENST00000640916 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.17□□□□□ -0.78
SCARB2-226ENST00000640916 MUC6Q6W4X9 2439 aa10.16□□□□□ -0.78
SCARB2-226ENST00000640916 GRXCR1A8MXD5 290 aa10.16□□□□□ -0.78
SCARB2-226ENST00000640916 HOXC6P09630 235 aa10.16□□□□□ -0.78
SCARB2-226ENST00000640916 CNGA1P29973 690 aa10.16□□□□□ -0.78
SCARB2-226ENST00000640916 CYP2C19P33261 490 aa10.16□□□□□ -0.78
SCARB2-226ENST00000640916 ADCYAP1R1P41586 468 aa10.16□□□□□ -0.78
SCARB2-226ENST00000640916 BACE1P56817 501 aa10.16□□□□□ -0.78
SCARB2-226ENST00000640916 MFSD14CQ5VZR4 134 aa10.16□□□□□ -0.78
SCARB2-226ENST00000640916 ANO1Q5XXA6 986 aa10.16□□□□□ -0.78
SCARB2-226ENST00000640916 NDUFB9Q9Y6M9 179 aa10.16□□□□□ -0.78
SCARB2-226ENST00000640916 CDK5RAP2Q96SN8 1893 aa10.15□□□□□ -0.78
SCARB2-226ENST00000640916 KIAA0355O15063 1070 aa10.15□□□□□ -0.78
SCARB2-226ENST00000640916 SEC24BO95487 1268 aa10.15□□□□□ -0.78
SCARB2-226ENST00000640916 PTPREP23469 700 aa10.15□□□□□ -0.78
SCARB2-226ENST00000640916 ZEB1P37275 1124 aaPredicted RBP10.15□□□□□ -0.78
SCARB2-226ENST00000640916 BTDP43251 543 aa10.15□□□□□ -0.78
SCARB2-226ENST00000640916 RFX5P48382 616 aaPredicted RBP10.15□□□□□ -0.78
SCARB2-226ENST00000640916 RASIP1Q5U651 963 aa10.15□□□□□ -0.78
SCARB2-226ENST00000640916 C16orf59Q7L2K0 433 aa10.15□□□□□ -0.78
SCARB2-226ENST00000640916 ATG9AQ7Z3C6 839 aa10.15□□□□□ -0.78
SCARB2-226ENST00000640916 ARRDC4Q8NCT1 418 aa10.15□□□□□ -0.78
SCARB2-226ENST00000640916 LPIN2Q92539 896 aa10.15□□□□□ -0.78
SCARB2-226ENST00000640916 KHSRPQ92945 711 aaKnown RBP eCLIP10.15□□□□□ -0.78
SCARB2-226ENST00000640916 GAS2L1Q99501 681 aaPredicted RBP10.15□□□□□ -0.78
SCARB2-226ENST00000640916 PBX4Q9BYU1 374 aa10.15□□□□□ -0.78
SCARB2-226ENST00000640916 CXXC1Q9P0U4 656 aaPredicted RBP10.15□□□□□ -0.78
SCARB2-226ENST00000640916 HCN4Q9Y3Q4 1203 aa10.15□□□□□ -0.78
SCARB2-226ENST00000640916 TACC3Q9Y6A5 838 aa10.15□□□□□ -0.78
SCARB2-226ENST00000640916 ZNF236Q9UL36 1845 aa10.14□□□□□ -0.79
SCARB2-226ENST00000640916 ZNFX1Q9P2E3 1918 aaKnown RBP10.14□□□□□ -0.79
SCARB2-226ENST00000640916 GPR75-ASB3A0A0A6YYF3 556 aa10.14□□□□□ -0.79
SCARB2-226ENST00000640916 SLC15A5A6NIM6 579 aa10.14□□□□□ -0.79
SCARB2-226ENST00000640916 SLC5A1P13866 664 aa10.14□□□□□ -0.79
SCARB2-226ENST00000640916 PHKA1P46020 1223 aa10.14□□□□□ -0.79
SCARB2-226ENST00000640916 KCNQ1P51787 676 aa10.14□□□□□ -0.79
SCARB2-226ENST00000640916 TFF2Q03403 129 aa10.14□□□□□ -0.79
SCARB2-226ENST00000640916 GRB14Q14449 540 aa10.14□□□□□ -0.79
SCARB2-226ENST00000640916 LRRC41Q15345 812 aa10.14□□□□□ -0.79
SCARB2-226ENST00000640916 WWC1Q8IX03 1113 aa10.14□□□□□ -0.79
SCARB2-226ENST00000640916 FERMT2Q96AC1 680 aa10.14□□□□□ -0.79
SCARB2-226ENST00000640916 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.14□□□□□ -0.79
SCARB2-226ENST00000640916 PAGR1Q9BTK6 254 aa10.14□□□□□ -0.79
SCARB2-226ENST00000640916 AS3MTQ9HBK9 375 aa10.14□□□□□ -0.79
SCARB2-226ENST00000640916 EMILIN3Q9NT22 766 aa10.14□□□□□ -0.79
SCARB2-226ENST00000640916 BOLA1Q9Y3E2 137 aa10.14□□□□□ -0.79
SCARB2-226ENST00000640916 C19orf81C9J6K1 198 aa10.13□□□□□ -0.79
SCARB2-226ENST00000640916 CLTBP09497 229 aa10.13□□□□□ -0.79
SCARB2-226ENST00000640916 ATP2B2Q01814 1243 aa10.13□□□□□ -0.79
SCARB2-226ENST00000640916 FPGSQ05932 587 aa10.13□□□□□ -0.79
SCARB2-226ENST00000640916 SRCIN1Q9C0H9 1055 aa10.13□□□□□ -0.79
SCARB2-226ENST00000640916 DNAJC18Q9H819 358 aa10.13□□□□□ -0.79
SCARB2-226ENST00000640916 DENND2AQ9ULE3 1009 aa10.13□□□□□ -0.79
SCARB2-226ENST00000640916 RABGAP1Q9Y3P9 1069 aa10.13□□□□□ -0.79
SCARB2-226ENST00000640916 TRANK1O15050 2925 aa10.13□□□□□ -0.79
SCARB2-226ENST00000640916 FOCADQ5VW36 1801 aa10.12□□□□□ -0.79
SCARB2-226ENST00000640916 MROH7-TTC4A0A0A0MT08 1334 aa10.12□□□□□ -0.79
SCARB2-226ENST00000640916 FANCIQ9NVI1 1328 aa10.12□□□□□ -0.79
SCARB2-226ENST00000640916 USP17L10C9JJH3 530 aa10.12□□□□□ -0.79
SCARB2-226ENST00000640916 KBTBD13C9JR72 458 aa10.12□□□□□ -0.79
SCARB2-226ENST00000640916 EYA2O00167 538 aa10.12□□□□□ -0.79
SCARB2-226ENST00000640916 SEPT4O43236 478 aa10.12□□□□□ -0.79
SCARB2-226ENST00000640916 GPR37L1O60883 481 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms