RNA–Protein interactions for RNA: ENST00000640859.1

GFAP-238, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 1,162 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-238ENST00000640859 CATIPQ7Z7H3 387 aa13.03□□□□□ -0.32
GFAP-238ENST00000640859 CERS3Q8IU89 383 aa13.03□□□□□ -0.32
GFAP-238ENST00000640859 TRIM22Q8IYM9 498 aa13.03□□□□□ -0.32
GFAP-238ENST00000640859 TBC1D22AQ8WUA7 517 aa13.03□□□□□ -0.32
GFAP-238ENST00000640859 NUP133Q8WUM0 1156 aa13.03□□□□□ -0.32
GFAP-238ENST00000640859 RNF26Q9BY78 433 aaPredicted RBP13.03□□□□□ -0.32
GFAP-238ENST00000640859 RRAGDQ9NQL2 400 aaPredicted RBP13.03□□□□□ -0.32
GFAP-238ENST00000640859 RBM28Q9NW13 759 aaKnown RBP13.03□□□□□ -0.32
GFAP-238ENST00000640859 MCM9Q9NXL9 1143 aa13.03□□□□□ -0.32
GFAP-238ENST00000640859 MRVI1Q9Y6F6 885 aa13.03□□□□□ -0.32
GFAP-238ENST00000640859 COL11A2P13942 1736 aaPredicted RBP13.02□□□□□ -0.32
GFAP-238ENST00000640859 GOLGB1Q14789 3259 aaKnown RBP13.02□□□□□ -0.32
GFAP-238ENST00000640859 CTAGE5O15320 804 aa13.02□□□□□ -0.33
GFAP-238ENST00000640859 PRPF3O43395 683 aaKnown RBP13.02□□□□□ -0.33
GFAP-238ENST00000640859 MMP1P03956 469 aa13.02□□□□□ -0.33
GFAP-238ENST00000640859 ME1P48163 572 aa13.02□□□□□ -0.33
GFAP-238ENST00000640859 RASSF7Q02833 373 aa13.02□□□□□ -0.33
GFAP-238ENST00000640859 FAM160A1Q05DH4 1040 aa13.02□□□□□ -0.33
GFAP-238ENST00000640859 TYRO3Q06418 890 aa13.02□□□□□ -0.33
GFAP-238ENST00000640859 TROAPQ12815 778 aa13.02□□□□□ -0.33
GFAP-238ENST00000640859 SLC39A14Q15043 492 aa13.02□□□□□ -0.33
GFAP-238ENST00000640859 HS1BP3Q53T59 392 aa13.02□□□□□ -0.33
GFAP-238ENST00000640859 FAM47AQ5JRC9 791 aa13.02□□□□□ -0.33
GFAP-238ENST00000640859 C9orf131Q5VYM1 1079 aa13.02□□□□□ -0.33
GFAP-238ENST00000640859 CCDC73Q6ZRK6 1079 aa13.02□□□□□ -0.33
GFAP-238ENST00000640859 NIM1KQ8IY84 436 aa13.02□□□□□ -0.33
GFAP-238ENST00000640859 FSIP1Q8NA03 581 aa13.02□□□□□ -0.33
GFAP-238ENST00000640859 MRPS27Q92552 414 aaKnown RBP13.02□□□□□ -0.33
GFAP-238ENST00000640859 ANKS1AQ92625 1134 aa13.02□□□□□ -0.33
GFAP-238ENST00000640859 TRIM44Q96DX7 344 aaPredicted RBP13.02□□□□□ -0.33
GFAP-238ENST00000640859 NOL10Q9BSC4 688 aaKnown RBP13.02□□□□□ -0.33
GFAP-238ENST00000640859 COA1Q9GZY4 146 aa13.02□□□□□ -0.33
GFAP-238ENST00000640859 GAKO14976 1311 aa13.02□□□□□ -0.33
GFAP-238ENST00000640859 ZC3H4Q9UPT8 1303 aaKnown RBP13.02□□□□□ -0.33
GFAP-238ENST00000640859 BTDP43251 543 aa13.01□□□□□ -0.33
GFAP-238ENST00000640859 EIF6P56537 245 aaKnown RBP13.01□□□□□ -0.33
GFAP-238ENST00000640859 PTPAQ15257 358 aa13.01□□□□□ -0.33
GFAP-238ENST00000640859 SF3A1Q15459 793 aaKnown RBP13.01□□□□□ -0.33
GFAP-238ENST00000640859 PKN1Q16512 942 aa13.01□□□□□ -0.33
GFAP-238ENST00000640859 AXDND1Q5T1B0 1012 aaPredicted RBP13.01□□□□□ -0.33
GFAP-238ENST00000640859 CKAP2LQ8IYA6 745 aa13.01□□□□□ -0.33
GFAP-238ENST00000640859 FMR1NBQ8N0W7 255 aaPredicted RBP13.01□□□□□ -0.33
GFAP-238ENST00000640859 TGFBRAP1Q8WUH2 860 aa13.01□□□□□ -0.33
GFAP-238ENST00000640859 MAP3K14Q99558 947 aa13.01□□□□□ -0.33
GFAP-238ENST00000640859 ZNF277Q9NRM2 450 aaPredicted RBP13.01□□□□□ -0.33
GFAP-238ENST00000640859 CREBZFQ9NS37 354 aa13.01□□□□□ -0.33
GFAP-238ENST00000640859 DDX60LQ5H9U9 1706 aaKnown RBP13.01□□□□□ -0.33
GFAP-238ENST00000640859 NFKBIEO00221 500 aa13□□□□□ -0.33
GFAP-238ENST00000640859 NMT2O60551 498 aa13□□□□□ -0.33
GFAP-238ENST00000640859 PPP6R2O75170 966 aa13□□□□□ -0.33
GFAP-238ENST00000640859 PLCG2P16885 1265 aa13□□□□□ -0.33
GFAP-238ENST00000640859 RHBDL3P58872 404 aa13□□□□□ -0.33
GFAP-238ENST00000640859 MFSD14BQ5SR56 506 aa13□□□□□ -0.33
GFAP-238ENST00000640859 RCSD1Q6JBY9 416 aa13□□□□□ -0.33
GFAP-238ENST00000640859 OLFM4Q6UX06 510 aa13□□□□□ -0.33
GFAP-238ENST00000640859 TMTC3Q6ZXV5 915 aa13□□□□□ -0.33
GFAP-238ENST00000640859 SLF2Q8IX21 1173 aa13□□□□□ -0.33
GFAP-238ENST00000640859 CMTR1Q8N1G2 835 aaKnown RBP13□□□□□ -0.33
GFAP-238ENST00000640859 SPOCK2Q92563 424 aa13□□□□□ -0.33
GFAP-238ENST00000640859 DYNLL2Q96FJ2 89 aa13□□□□□ -0.33
GFAP-238ENST00000640859 FOXP1Q9H334 677 aaPredicted RBP13□□□□□ -0.33
GFAP-238ENST00000640859 TCP11L1Q9NUJ3 509 aa13□□□□□ -0.33
GFAP-238ENST00000640859 KCNJ14Q9UNX9 436 aa13□□□□□ -0.33
GFAP-238ENST00000640859 SUGT1Q9Y2Z0 365 aa13□□□□□ -0.33
GFAP-238ENST00000640859 MYH1P12882 1939 aa13□□□□□ -0.33
GFAP-238ENST00000640859 FOCADQ5VW36 1801 aa12.99□□□□□ -0.33
GFAP-238ENST00000640859 ARFGEF1Q9Y6D6 1849 aa12.99□□□□□ -0.33
GFAP-238ENST00000640859 ESPNB1AK53 854 aa12.99□□□□□ -0.33
GFAP-238ENST00000640859 BTBD18B2RXH4 712 aa12.99□□□□□ -0.33
GFAP-238ENST00000640859 RIMBP2O15034 1052 aa12.99□□□□□ -0.33
GFAP-238ENST00000640859 WDHD1O75717 1129 aaPredicted RBP12.99□□□□□ -0.33
GFAP-238ENST00000640859 PLEKHA8P1O95397 391 aa12.99□□□□□ -0.33
GFAP-238ENST00000640859 CMA1P23946 247 aa12.99□□□□□ -0.33
GFAP-238ENST00000640859 YY1P25490 414 aa12.99□□□□□ -0.33
GFAP-238ENST00000640859 TFAP4Q01664 338 aa12.99□□□□□ -0.33
GFAP-238ENST00000640859 KIAA2012Q0VF49 1180 aa12.99□□□□□ -0.33
GFAP-238ENST00000640859 GNL2Q13823 731 aaKnown RBP12.99□□□□□ -0.33
GFAP-238ENST00000640859 SAFBQ15424 915 aaKnown RBP eCLIP12.99□□□□□ -0.33
GFAP-238ENST00000640859 CCDC178Q5BJE1 867 aa12.99□□□□□ -0.33
GFAP-238ENST00000640859 DGKHQ86XP1 1220 aa12.99□□□□□ -0.33
GFAP-238ENST00000640859 NOSTRINQ8IVI9 506 aa12.99□□□□□ -0.33
GFAP-238ENST00000640859 MAPKAPK5Q8IW41 473 aa12.99□□□□□ -0.33
GFAP-238ENST00000640859 DIS3L2Q8IYB7 885 aaKnown RBP12.99□□□□□ -0.33
GFAP-238ENST00000640859 TEX11Q8IYF3 940 aa12.99□□□□□ -0.33
GFAP-238ENST00000640859 CCDC82Q8N4S0 544 aa12.99□□□□□ -0.33
GFAP-238ENST00000640859 FAM200AQ8TCP9 573 aa12.99□□□□□ -0.33
GFAP-238ENST00000640859 SHISA4Q96DD7 197 aa12.99□□□□□ -0.33
GFAP-238ENST00000640859 IL17RBQ9NRM6 502 aa12.99□□□□□ -0.33
GFAP-238ENST00000640859 SLX4Q8IY92 1834 aa12.99□□□□□ -0.33
GFAP-238ENST00000640859 BRCA1P38398 1863 aaKnown RBP12.98□□□□□ -0.33
GFAP-238ENST00000640859 CNTNAP5Q8WYK1 1306 aa12.98□□□□□ -0.33
GFAP-238ENST00000640859 FAM237AA0A1B0GTK4 181 aa12.98□□□□□ -0.33
GFAP-238ENST00000640859 TSPY2A6NKD2 308 aa12.98□□□□□ -0.33
GFAP-238ENST00000640859 KINO60870 393 aaKnown RBP12.98□□□□□ -0.33
GFAP-238ENST00000640859 TOB1P50616 345 aaPredicted RBP12.98□□□□□ -0.33
GFAP-238ENST00000640859 PLCD1P51178 756 aa12.98□□□□□ -0.33
GFAP-238ENST00000640859 GTF2IP78347 998 aa12.98□□□□□ -0.33
GFAP-238ENST00000640859 AKAP17AQ02040 695 aaKnown RBP12.98□□□□□ -0.33
GFAP-238ENST00000640859 AOC3Q16853 763 aa12.98□□□□□ -0.33
GFAP-238ENST00000640859 SASS6Q6UVJ0 657 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms