RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 TCP10L2B9ZVM9 353 aa6.47□□□□□ -1.37
RTTN-218ENST00000640408 USP17L12C9JPN9 530 aa6.47□□□□□ -1.37
RTTN-218ENST00000640408 USP17L21D6R901 530 aa6.47□□□□□ -1.37
RTTN-218ENST00000640408 TOMM70O94826 608 aa6.47□□□□□ -1.37
RTTN-218ENST00000640408 CERKLQ49MI3 558 aaPredicted RBP6.47□□□□□ -1.37
RTTN-218ENST00000640408 KRBA2Q6ZNG9 492 aa6.47□□□□□ -1.37
RTTN-218ENST00000640408 IDI2Q9BXS1 227 aa6.47□□□□□ -1.37
RTTN-218ENST00000640408 TDRD3Q9H7E2 651 aaKnown RBP6.47□□□□□ -1.37
RTTN-218ENST00000640408 GGA3Q9NZ52 723 aa6.47□□□□□ -1.37
RTTN-218ENST00000640408 ABT1Q9ULW3 272 aaKnown RBP6.47□□□□□ -1.37
RTTN-218ENST00000640408 STX8Q9UNK0 236 aa6.47□□□□□ -1.37
RTTN-218ENST00000640408 CBFA2T2O43439 604 aa6.46□□□□□ -1.37
RTTN-218ENST00000640408 INHBEP58166 350 aa6.46□□□□□ -1.37
RTTN-218ENST00000640408 CCNA1P78396 465 aa6.46□□□□□ -1.37
RTTN-218ENST00000640408 RASA3Q14644 834 aa6.46□□□□□ -1.37
RTTN-218ENST00000640408 AKNAD1Q5T1N1 836 aa6.46□□□□□ -1.37
RTTN-218ENST00000640408 JAKMIP3Q5VZ66 844 aa6.46□□□□□ -1.37
RTTN-218ENST00000640408 SMARCE1Q969G3 411 aa6.46□□□□□ -1.37
RTTN-218ENST00000640408 ARMT1Q9H993 441 aa6.46□□□□□ -1.37
RTTN-218ENST00000640408 SLC5A4Q9NY91 659 aa6.46□□□□□ -1.37
RTTN-218ENST00000640408 SYCE3A1L190 88 aa6.46□□□□□ -1.38
RTTN-218ENST00000640408 TUBB4AP04350 444 aa6.46□□□□□ -1.38
RTTN-218ENST00000640408 COPB2P35606 906 aa6.46□□□□□ -1.38
RTTN-218ENST00000640408 ZNF280AP59817 542 aaPredicted RBP6.46□□□□□ -1.38
RTTN-218ENST00000640408 KIF22Q14807 665 aa6.46□□□□□ -1.38
RTTN-218ENST00000640408 SBK1Q52WX2 424 aa6.46□□□□□ -1.38
RTTN-218ENST00000640408 TMEM179Q6ZVK1 233 aa6.46□□□□□ -1.38
RTTN-218ENST00000640408 IFNL3Q8IZI9 196 aa6.46□□□□□ -1.38
RTTN-218ENST00000640408 NEK1Q96PY6 1258 aa6.46□□□□□ -1.38
RTTN-218ENST00000640408 CRACR2AQ9BSW2 395 aa6.46□□□□□ -1.38
RTTN-218ENST00000640408 TAF1DQ9H5J8 278 aaPredicted RBP6.46□□□□□ -1.38
RTTN-218ENST00000640408 SH2B1Q9NRF2 756 aaPredicted RBP6.46□□□□□ -1.38
RTTN-218ENST00000640408 CLRN2A0PK11 232 aa6.46□□□□□ -1.38
RTTN-218ENST00000640408 KIF1CO43896 1103 aaKnown RBP6.46□□□□□ -1.38
RTTN-218ENST00000640408 ALDH1A1P00352 501 aa6.46□□□□□ -1.38
RTTN-218ENST00000640408 FSTL1Q12841 308 aa6.46□□□□□ -1.38
RTTN-218ENST00000640408 WTAPQ15007 396 aa6.46□□□□□ -1.38
RTTN-218ENST00000640408 KLHL40Q2TBA0 621 aa6.46□□□□□ -1.38
RTTN-218ENST00000640408 RNF187Q5TA31 235 aaPredicted RBP6.46□□□□□ -1.38
RTTN-218ENST00000640408 CEP135Q66GS9 1140 aa6.46□□□□□ -1.38
RTTN-218ENST00000640408 RCSD1Q6JBY9 416 aa6.46□□□□□ -1.38
RTTN-218ENST00000640408 OLFM4Q6UX06 510 aa6.46□□□□□ -1.38
RTTN-218ENST00000640408 FASTKD5Q7L8L6 764 aaKnown RBP6.46□□□□□ -1.38
RTTN-218ENST00000640408 STRBPQ96SI9 672 aaKnown RBP6.46□□□□□ -1.38
RTTN-218ENST00000640408 PANK2Q9BZ23 570 aa6.46□□□□□ -1.38
RTTN-218ENST00000640408 NOL7Q9UMY1 257 aaKnown RBP6.46□□□□□ -1.38
RTTN-218ENST00000640408 RBM8AQ9Y5S9 174 aaKnown RBP6.46□□□□□ -1.38
RTTN-218ENST00000640408 SBF2Q86WG5 1849 aa6.46□□□□□ -1.38
RTTN-218ENST00000640408 MYH14Q7Z406 1995 aaKnown RBP6.46□□□□□ -1.38
RTTN-218ENST00000640408 PAPPAQ13219 1627 aa6.46□□□□□ -1.38
RTTN-218ENST00000640408 SNAP23O00161 211 aa6.46□□□□□ -1.38
RTTN-218ENST00000640408 SCARF1Q14162 830 aa6.46□□□□□ -1.38
RTTN-218ENST00000640408 DIXDC1Q155Q3 683 aa6.46□□□□□ -1.38
RTTN-218ENST00000640408 CCDC96Q2M329 555 aa6.46□□□□□ -1.38
RTTN-218ENST00000640408 TTC14Q96N46 770 aa6.46□□□□□ -1.38
RTTN-218ENST00000640408 GPR101Q96P66 508 aaPredicted RBP6.46□□□□□ -1.38
RTTN-218ENST00000640408 DEFB129Q9H1M3 183 aa6.46□□□□□ -1.38
RTTN-218ENST00000640408 SEC63Q9UGP8 760 aaKnown RBP6.46□□□□□ -1.38
RTTN-218ENST00000640408 KCNA3P22001 575 aa6.45□□□□□ -1.38
RTTN-218ENST00000640408 MAP3K9P80192 1104 aa6.45□□□□□ -1.38
RTTN-218ENST00000640408 ABCB5Q2M3G0 1257 aa6.45□□□□□ -1.38
RTTN-218ENST00000640408 ANGEL2Q5VTE6 544 aaKnown RBP6.45□□□□□ -1.38
RTTN-218ENST00000640408 MCTP2Q6DN12 878 aa6.45□□□□□ -1.38
RTTN-218ENST00000640408 RNF168Q8IYW5 571 aaPredicted RBP6.45□□□□□ -1.38
RTTN-218ENST00000640408 TM6SF1Q9BZW5 370 aa6.45□□□□□ -1.38
RTTN-218ENST00000640408 GOPCQ9HD26 462 aa6.45□□□□□ -1.38
RTTN-218ENST00000640408 PIH1D3Q9NQM4 214 aaKnown RBP6.45□□□□□ -1.38
RTTN-218ENST00000640408 ZBTB12Q9Y330 459 aaPredicted RBP6.45□□□□□ -1.38
RTTN-218ENST00000640408 GAKO14976 1311 aa6.45□□□□□ -1.38
RTTN-218ENST00000640408 WDR33Q9C0J8 1336 aaKnown RBP6.45□□□□□ -1.38
RTTN-218ENST00000640408 SMTNL1A8MU46 457 aa6.45□□□□□ -1.38
RTTN-218ENST00000640408 TCP10Q12799 353 aa6.45□□□□□ -1.38
RTTN-218ENST00000640408 SPDYE2Q495Y8 402 aa6.45□□□□□ -1.38
RTTN-218ENST00000640408 PI4K2BQ8TCG2 481 aa6.45□□□□□ -1.38
RTTN-218ENST00000640408 OSBPL5Q9H0X9 879 aaPredicted RBP6.45□□□□□ -1.38
RTTN-218ENST00000640408 GBA2Q9HCG7 927 aaPredicted RBP6.45□□□□□ -1.38
RTTN-218ENST00000640408 SLC12A7Q9Y666 1083 aa6.45□□□□□ -1.38
RTTN-218ENST00000640408 SIPA1L3O60292 1781 aaPredicted RBP6.45□□□□□ -1.38
RTTN-218ENST00000640408 TJP1Q07157 1748 aa6.45□□□□□ -1.38
RTTN-218ENST00000640408 C19orf81C9J6K1 198 aa6.45□□□□□ -1.38
RTTN-218ENST00000640408 ZSCAN12O43309 604 aa6.45□□□□□ -1.38
RTTN-218ENST00000640408 TMEM67Q5HYA8 995 aa6.45□□□□□ -1.38
RTTN-218ENST00000640408 JAKMIP1Q96N16 626 aaKnown RBP6.45□□□□□ -1.38
RTTN-218ENST00000640408 CEP89Q96ST8 783 aa6.45□□□□□ -1.38
RTTN-218ENST00000640408 EHD4Q9H223 541 aa6.45□□□□□ -1.38
RTTN-218ENST00000640408 ANGEL1Q9UNK9 670 aaKnown RBP6.45□□□□□ -1.38
RTTN-218ENST00000640408 NEBLO76041 1014 aa6.45□□□□□ -1.38
RTTN-218ENST00000640408 CCDC183Q5T5S1 534 aa6.45□□□□□ -1.38
RTTN-218ENST00000640408 POTEDQ86YR6 584 aa6.45□□□□□ -1.38
RTTN-218ENST00000640408 CCDC50Q8IVM0 306 aa6.45□□□□□ -1.38
RTTN-218ENST00000640408 PDILTQ8N807 584 aa6.45□□□□□ -1.38
RTTN-218ENST00000640408 NUP133Q8WUM0 1156 aa6.45□□□□□ -1.38
RTTN-218ENST00000640408 CASQ1P31415 396 aa6.44□□□□□ -1.38
RTTN-218ENST00000640408 PPARAQ07869 468 aa6.44□□□□□ -1.38
RTTN-218ENST00000640408 GPATCH4Q5T3I0 446 aaKnown RBP6.44□□□□□ -1.38
RTTN-218ENST00000640408 DHX32Q7L7V1 743 aaKnown RBP6.44□□□□□ -1.38
RTTN-218ENST00000640408 TLR7Q9NYK1 1049 aaKnown RBP6.44□□□□□ -1.38
RTTN-218ENST00000640408 USP17L5A8MUK1 530 aa6.44□□□□□ -1.38
RTTN-218ENST00000640408 IBSPP21815 317 aaPredicted RBP6.44□□□□□ -1.38
RTTN-218ENST00000640408 OSBPP22059 807 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms