RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 ZSWIM5Q9P217 1185 aa8.44□□□□□ -1.06
CCDC7-216ENST00000640058 CEP131Q9UPN4 1083 aa8.44□□□□□ -1.06
CCDC7-216ENST00000640058 ST14Q9Y5Y6 855 aa8.44□□□□□ -1.06
CCDC7-216ENST00000640058 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.43□□□□□ -1.06
CCDC7-216ENST00000640058 DNAJA2O60884 412 aa8.43□□□□□ -1.06
CCDC7-216ENST00000640058 TMEM201Q5SNT2 666 aa8.43□□□□□ -1.06
CCDC7-216ENST00000640058 UBE2FQ969M7 185 aa8.43□□□□□ -1.06
CCDC7-216ENST00000640058 BRMS1Q9HCU9 246 aa8.43□□□□□ -1.06
CCDC7-216ENST00000640058 SUPT16HQ9Y5B9 1047 aaKnown RBP8.43□□□□□ -1.06
CCDC7-216ENST00000640058 JUNBP17275 347 aaPredicted RBP8.42□□□□□ -1.06
CCDC7-216ENST00000640058 KIR3DL1P43629 444 aa8.42□□□□□ -1.06
CCDC7-216ENST00000640058 TNNI2P48788 182 aa8.42□□□□□ -1.06
CCDC7-216ENST00000640058 BAHD1Q8TBE0 780 aaPredicted RBP8.42□□□□□ -1.06
CCDC7-216ENST00000640058 ZNF296Q8WUU4 475 aaPredicted RBP8.42□□□□□ -1.06
CCDC7-216ENST00000640058 ASIC4Q96FT7 647 aa8.42□□□□□ -1.06
CCDC7-216ENST00000640058 Q96M66 194 aa8.42□□□□□ -1.06
CCDC7-216ENST00000640058 FMNL2Q96PY5 1086 aa8.42□□□□□ -1.06
CCDC7-216ENST00000640058 ADAMTS1Q9UHI8 967 aa8.42□□□□□ -1.06
CCDC7-216ENST00000640058 PRR36Q9H6K5 1346 aa8.41□□□□□ -1.06
CCDC7-216ENST00000640058 KRTAP9-6A0A140TA67 174 aa8.41□□□□□ -1.06
CCDC7-216ENST00000640058 WASH4PA8MWX3 477 aa8.41□□□□□ -1.06
CCDC7-216ENST00000640058 BIN1O00499 593 aa8.41□□□□□ -1.06
CCDC7-216ENST00000640058 CRKP46108 304 aa8.41□□□□□ -1.06
CCDC7-216ENST00000640058 CWF19L2Q2TBE0 894 aaKnown RBP8.41□□□□□ -1.06
CCDC7-216ENST00000640058 PHACTR4Q8IZ21 702 aa8.41□□□□□ -1.06
CCDC7-216ENST00000640058 COX4I2Q96KJ9 171 aa8.41□□□□□ -1.06
CCDC7-216ENST00000640058 PCDHB14Q9Y5E9 798 aa8.41□□□□□ -1.06
CCDC7-216ENST00000640058 LRRN2O75325 713 aa8.4□□□□□ -1.06
CCDC7-216ENST00000640058 TXKP42681 527 aa8.4□□□□□ -1.06
CCDC7-216ENST00000640058 LDLRAD1Q5T700 205 aa8.4□□□□□ -1.06
CCDC7-216ENST00000640058 ATG4DQ86TL0 474 aaPredicted RBP8.4□□□□□ -1.06
CCDC7-216ENST00000640058 KIF2CQ99661 725 aa8.4□□□□□ -1.06
CCDC7-216ENST00000640058 UBP1Q9NZI7 540 aa8.4□□□□□ -1.06
CCDC7-216ENST00000640058 GREM1O60565 184 aa8.39□□□□□ -1.07
CCDC7-216ENST00000640058 SEZ6Q53EL9 994 aa8.39□□□□□ -1.07
CCDC7-216ENST00000640058 THAP5Q7Z6K1 395 aa8.39□□□□□ -1.07
CCDC7-216ENST00000640058 SLFN12Q8IYM2 578 aa8.39□□□□□ -1.07
CCDC7-216ENST00000640058 BACH2Q9BYV9 841 aa8.39□□□□□ -1.07
CCDC7-216ENST00000640058 KCNQ5Q9NR82 932 aa8.39□□□□□ -1.07
CCDC7-216ENST00000640058 CARMIL2Q6F5E8 1435 aa8.38□□□□□ -1.07
CCDC7-216ENST00000640058 ARSHQ5FYA8 562 aa8.38□□□□□ -1.07
CCDC7-216ENST00000640058 FAM168AQ92567 244 aa8.38□□□□□ -1.07
CCDC7-216ENST00000640058 CCDC74BQ96LY2 380 aa8.38□□□□□ -1.07
CCDC7-216ENST00000640058 LRRC3Q9BY71 257 aa8.38□□□□□ -1.07
CCDC7-216ENST00000640058 LMCD1Q9NZU5 365 aa8.38□□□□□ -1.07
CCDC7-216ENST00000640058 MCM4P33991 863 aa8.37□□□□□ -1.07
CCDC7-216ENST00000640058 ZNF76P36508 570 aa8.37□□□□□ -1.07
CCDC7-216ENST00000640058 APOBRQ0VD83 1088 aa8.37□□□□□ -1.07
CCDC7-216ENST00000640058 TRIM26Q12899 539 aaPredicted RBP8.37□□□□□ -1.07
CCDC7-216ENST00000640058 GK5Q6ZS86 529 aa8.37□□□□□ -1.07
CCDC7-216ENST00000640058 DTWD2Q8NBA8 298 aa8.37□□□□□ -1.07
CCDC7-216ENST00000640058 PIWIL2Q8TC59 973 aaKnown RBP8.37□□□□□ -1.07
CCDC7-216ENST00000640058 KREMEN1Q96MU8 473 aa8.37□□□□□ -1.07
CCDC7-216ENST00000640058 CTNND2Q9UQB3 1225 aa8.37□□□□□ -1.07
CCDC7-216ENST00000640058 GBP1P32455 592 aa8.36□□□□□ -1.07
CCDC7-216ENST00000640058 CHMP4BP1P59074 171 aa8.36□□□□□ -1.07
CCDC7-216ENST00000640058 MLECQ14165 292 aa8.36□□□□□ -1.07
CCDC7-216ENST00000640058 OGFOD2Q6N063 350 aa8.36□□□□□ -1.07
CCDC7-216ENST00000640058 CREG2Q8IUH2 290 aa8.36□□□□□ -1.07
CCDC7-216ENST00000640058 RNF141Q8WVD5 230 aa8.36□□□□□ -1.07
CCDC7-216ENST00000640058 KRTAP4-12Q9BQ66 201 aa8.36□□□□□ -1.07
CCDC7-216ENST00000640058 SLAMF8Q9P0V8 285 aa8.36□□□□□ -1.07
CCDC7-216ENST00000640058 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.36□□□□□ -1.07
CCDC7-216ENST00000640058 ROBO2Q9HCK4 1378 aa8.35□□□□□ -1.07
CCDC7-216ENST00000640058 SLC22A31A6NKX4 558 aa8.35□□□□□ -1.07
CCDC7-216ENST00000640058 RAG1P15918 1043 aa8.35□□□□□ -1.07
CCDC7-216ENST00000640058 TPP2P29144 1249 aaPredicted RBP8.35□□□□□ -1.07
CCDC7-216ENST00000640058 CLCQ05315 142 aa8.35□□□□□ -1.07
CCDC7-216ENST00000640058 OVOS1Q6IE37 1185 aa8.35□□□□□ -1.07
CCDC7-216ENST00000640058 FLAD1Q8NFF5 587 aa8.35□□□□□ -1.07
CCDC7-216ENST00000640058 DUSP15Q9H1R2 295 aaPredicted RBP8.35□□□□□ -1.07
CCDC7-216ENST00000640058 KCNH3Q9ULD8 1083 aa8.35□□□□□ -1.07
CCDC7-216ENST00000640058 PCDHGB7Q9Y5F8 929 aa8.35□□□□□ -1.07
CCDC7-216ENST00000640058 RBM47A0AV96 593 aaKnown RBP8.34□□□□□ -1.07
CCDC7-216ENST00000640058 ESR1P03372 595 aa8.34□□□□□ -1.07
CCDC7-216ENST00000640058 POLR2BP30876 1174 aaKnown RBP8.34□□□□□ -1.07
CCDC7-216ENST00000640058 FANCCQ00597 558 aa8.34□□□□□ -1.07
CCDC7-216ENST00000640058 ZNF394Q53GI3 561 aa8.34□□□□□ -1.07
CCDC7-216ENST00000640058 USP48Q86UV5 1035 aa8.34□□□□□ -1.07
CCDC7-216ENST00000640058 KIAA0825Q8IV33 1275 aa8.34□□□□□ -1.07
CCDC7-216ENST00000640058 NKD1Q969G9 470 aa8.34□□□□□ -1.07
CCDC7-216ENST00000640058 EAF1Q96JC9 268 aaPredicted RBP8.34□□□□□ -1.07
CCDC7-216ENST00000640058 SPON2Q9BUD6 331 aa8.34□□□□□ -1.07
CCDC7-216ENST00000640058 TRIT1Q9H3H1 467 aaKnown RBP8.34□□□□□ -1.07
CCDC7-216ENST00000640058 FYB2Q5VWT5 728 aa8.33□□□□□ -1.08
CCDC7-216ENST00000640058 ALPK1Q96QP1 1244 aa8.33□□□□□ -1.08
CCDC7-216ENST00000640058 GOLGA2P5Q9HBQ8 144 aa8.33□□□□□ -1.08
CCDC7-216ENST00000640058 C19orf73Q9NVV2 129 aa8.33□□□□□ -1.08
CCDC7-216ENST00000640058 GPATCH2Q9NW75 528 aa8.33□□□□□ -1.08
CCDC7-216ENST00000640058 GMIPQ9P107 970 aa8.33□□□□□ -1.08
CCDC7-216ENST00000640058 DUSP13Q9UII6 198 aa8.33□□□□□ -1.08
CCDC7-216ENST00000640058 DNAJC25-GNG10A0A024R161 153 aa8.32□□□□□ -1.08
CCDC7-216ENST00000640058 RGS13O14921 159 aa8.32□□□□□ -1.08
CCDC7-216ENST00000640058 KCNMB1Q16558 191 aa8.32□□□□□ -1.08
CCDC7-216ENST00000640058 RALGPS1Q5JS13 557 aa8.32□□□□□ -1.08
CCDC7-216ENST00000640058 TMPRSS7Q7RTY8 843 aa8.32□□□□□ -1.08
CCDC7-216ENST00000640058 ZSWIM9Q86XI8 627 aa8.32□□□□□ -1.08
CCDC7-216ENST00000640058 ASPNQ9BXN1 380 aa8.32□□□□□ -1.08
CCDC7-216ENST00000640058 GPR62Q9BZJ7 368 aa8.32□□□□□ -1.08
CCDC7-216ENST00000640058 ANTXR1Q9H6X2 564 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 500.4 ms