RNA–Protein interactions for RNA: ENST00000639561.1

ATRIP-208, Transcript of ATR interacting protein, humanhuman

TSL 2

Gene ATRIP, Length 2,376 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-208ENST00000639561 WNT10BO00744 389 aa16.11■□□□□ 0.17
ATRIP-208ENST00000639561 IFIT3O14879 490 aaKnown RBP16.11■□□□□ 0.17
ATRIP-208ENST00000639561 ZBTB43O43298 467 aa16.11■□□□□ 0.17
ATRIP-208ENST00000639561 FKBP1BP68106 108 aa16.11■□□□□ 0.17
ATRIP-208ENST00000639561 NOGQ13253 232 aa16.11■□□□□ 0.17
ATRIP-208ENST00000639561 NBPF9Q3BBW0 867 aa16.11■□□□□ 0.17
ATRIP-208ENST00000639561 NSUN4Q96CB9 384 aaKnown RBP16.11■□□□□ 0.17
ATRIP-208ENST00000639561 AIFM3Q96NN9 605 aa16.11■□□□□ 0.17
ATRIP-208ENST00000639561 PDS5AQ29RF7 1337 aaKnown RBP16.1■□□□□ 0.17
ATRIP-208ENST00000639561 ESPNB1AK53 854 aa16.1■□□□□ 0.17
ATRIP-208ENST00000639561 NTRK3Q16288 839 aa16.1■□□□□ 0.17
ATRIP-208ENST00000639561 RGMBQ6NW40 437 aa16.1■□□□□ 0.17
ATRIP-208ENST00000639561 DLK2Q6UY11 383 aa16.1■□□□□ 0.17
ATRIP-208ENST00000639561 NFXL1Q6ZNB6 911 aa16.1■□□□□ 0.17
ATRIP-208ENST00000639561 APOBEC3FQ8IUX4 373 aaKnown RBP16.1■□□□□ 0.17
ATRIP-208ENST00000639561 BICD2Q8TD16 824 aa16.1■□□□□ 0.17
ATRIP-208ENST00000639561 PHKBQ93100 1093 aa16.1■□□□□ 0.17
ATRIP-208ENST00000639561 ZKSCAN3Q9BRR0 538 aa16.1■□□□□ 0.17
ATRIP-208ENST00000639561 PRDX5P30044 214 aa16.09■□□□□ 0.17
ATRIP-208ENST00000639561 MECOMQ03112 1051 aa16.09■□□□□ 0.17
ATRIP-208ENST00000639561 TOMM22Q9NS69 142 aa16.09■□□□□ 0.17
ATRIP-208ENST00000639561 FAM205AQ6ZU69 1335 aa16.09■□□□□ 0.17
ATRIP-208ENST00000639561 MINDY4BA8MYZ0 360 aa16.09■□□□□ 0.17
ATRIP-208ENST00000639561 KIF28PB7ZC32 967 aa16.09■□□□□ 0.17
ATRIP-208ENST00000639561 CA12O43570 354 aa16.09■□□□□ 0.17
ATRIP-208ENST00000639561 RANBP6O60518 1105 aaKnown RBP16.09■□□□□ 0.17
ATRIP-208ENST00000639561 AOC2O75106 756 aa16.09■□□□□ 0.17
ATRIP-208ENST00000639561 ATL3Q6DD88 541 aa16.09■□□□□ 0.17
ATRIP-208ENST00000639561 CCDC102AQ96A19 550 aa16.09■□□□□ 0.17
ATRIP-208ENST00000639561 ANAPC4Q9UJX5 808 aa16.09■□□□□ 0.17
ATRIP-208ENST00000639561 JAG2Q9Y219 1238 aa16.09■□□□□ 0.17
ATRIP-208ENST00000639561 GOLGA8AA7E2F4 631 aa16.08■□□□□ 0.17
ATRIP-208ENST00000639561 CHAF1AQ13111 956 aaPredicted RBP16.08■□□□□ 0.17
ATRIP-208ENST00000639561 DLGAP5Q15398 846 aa16.08■□□□□ 0.17
ATRIP-208ENST00000639561 MAP3K11Q16584 847 aa16.08■□□□□ 0.17
ATRIP-208ENST00000639561 MTMR14Q8NCE2 650 aa16.08■□□□□ 0.17
ATRIP-208ENST00000639561 ZNF396Q96N95 335 aaPredicted RBP16.08■□□□□ 0.17
ATRIP-208ENST00000639561 DDX19AQ9NUU7 478 aaKnown RBP16.08■□□□□ 0.17
ATRIP-208ENST00000639561 SLC12A7Q9Y666 1083 aa16.08■□□□□ 0.17
ATRIP-208ENST00000639561 UBE2Q2LH0YL09 131 aa16.08■□□□□ 0.16
ATRIP-208ENST00000639561 POLR3DP05423 398 aaPredicted RBP16.08■□□□□ 0.16
ATRIP-208ENST00000639561 HSPA8P11142 646 aaKnown RBP16.08■□□□□ 0.16
ATRIP-208ENST00000639561 NF2P35240 595 aa16.08■□□□□ 0.16
ATRIP-208ENST00000639561 CERS5Q8N5B7 392 aa16.08■□□□□ 0.16
ATRIP-208ENST00000639561 TDRD7Q8NHU6 1098 aaKnown RBP16.08■□□□□ 0.16
ATRIP-208ENST00000639561 ZBED3Q96IU2 234 aaPredicted RBP16.08■□□□□ 0.16
ATRIP-208ENST00000639561 CLSTN2Q9H4D0 955 aa16.08■□□□□ 0.16
ATRIP-208ENST00000639561 RNF41Q9H4P4 317 aaPredicted RBP16.08■□□□□ 0.16
ATRIP-208ENST00000639561 CYP2D7A0A087X1C5 515 aa16.07■□□□□ 0.16
ATRIP-208ENST00000639561 CDKL5O76039 1030 aa16.07■□□□□ 0.16
ATRIP-208ENST00000639561 KIF23Q02241 960 aaPredicted RBP16.07■□□□□ 0.16
ATRIP-208ENST00000639561 RBM43Q6ZSC3 357 aaKnown RBP16.07■□□□□ 0.16
ATRIP-208ENST00000639561 CKAP2LQ8IYA6 745 aa16.07■□□□□ 0.16
ATRIP-208ENST00000639561 TNMDQ9H2S6 317 aa16.07■□□□□ 0.16
ATRIP-208ENST00000639561 MYH2Q9UKX2 1941 aa16.07■□□□□ 0.16
ATRIP-208ENST00000639561 NID2Q14112 1375 aa16.07■□□□□ 0.16
ATRIP-208ENST00000639561 CCDC69A6NI79 296 aa16.07■□□□□ 0.16
ATRIP-208ENST00000639561 LBX1P52954 281 aa16.07■□□□□ 0.16
ATRIP-208ENST00000639561 ALG1Q9BT22 464 aa16.07■□□□□ 0.16
ATRIP-208ENST00000639561 GOLPH3LQ9H4A5 285 aa16.07■□□□□ 0.16
ATRIP-208ENST00000639561 MYO1BO43795 1136 aa16.06■□□□□ 0.16
ATRIP-208ENST00000639561 ZNF157P51786 506 aaPredicted RBP16.06■□□□□ 0.16
ATRIP-208ENST00000639561 RTEL1Q9NZ71 1219 aa16.06■□□□□ 0.16
ATRIP-208ENST00000639561 MAST2Q6P0Q8 1798 aa16.06■□□□□ 0.16
ATRIP-208ENST00000639561 PCNTO95613 3336 aa16.06■□□□□ 0.16
ATRIP-208ENST00000639561 CCDC192P0DO97 292 aa16.06■□□□□ 0.16
ATRIP-208ENST00000639561 EVX2Q03828 476 aa16.06■□□□□ 0.16
ATRIP-208ENST00000639561 WTAPQ15007 396 aa16.06■□□□□ 0.16
ATRIP-208ENST00000639561 UVSSAQ2YD98 709 aa16.06■□□□□ 0.16
ATRIP-208ENST00000639561 MYSM1Q5VVJ2 828 aa16.06■□□□□ 0.16
ATRIP-208ENST00000639561 AATFQ9NY61 560 aaKnown RBP eCLIP16.06■□□□□ 0.16
ATRIP-208ENST00000639561 CLIC4Q9Y696 253 aa16.06■□□□□ 0.16
ATRIP-208ENST00000639561 SART3Q15020 963 aaKnown RBP16.05■□□□□ 0.16
ATRIP-208ENST00000639561 MFSD14BQ5SR56 506 aa16.05■□□□□ 0.16
ATRIP-208ENST00000639561 CPLX2Q6PUV4 134 aaKnown RBP16.05■□□□□ 0.16
ATRIP-208ENST00000639561 BRAPQ7Z569 592 aa16.05■□□□□ 0.16
ATRIP-208ENST00000639561 USP25Q9UHP3 1055 aa16.05■□□□□ 0.16
ATRIP-208ENST00000639561 F8W031 263 aaPredicted RBP16.05■□□□□ 0.16
ATRIP-208ENST00000639561 SLC10A3P09131 477 aa16.05■□□□□ 0.16
ATRIP-208ENST00000639561 TYRO3Q06418 890 aa16.05■□□□□ 0.16
ATRIP-208ENST00000639561 CFAP100Q494V2 611 aa16.05■□□□□ 0.16
ATRIP-208ENST00000639561 CTR9Q6PD62 1173 aa16.05■□□□□ 0.16
ATRIP-208ENST00000639561 CCAR1Q8IX12 1150 aaKnown RBP16.05■□□□□ 0.16
ATRIP-208ENST00000639561 LINC00301Q8NCQ3 95 aa16.05■□□□□ 0.16
ATRIP-208ENST00000639561 RGS22Q8NE09 1264 aa16.05■□□□□ 0.16
ATRIP-208ENST00000639561 MTA3Q9BTC8 594 aa16.05■□□□□ 0.16
ATRIP-208ENST00000639561 MRVI1Q9Y6F6 885 aa16.05■□□□□ 0.16
ATRIP-208ENST00000639561 FAM155AB1AL88 458 aaPredicted RBP16.04■□□□□ 0.16
ATRIP-208ENST00000639561 ZBTB22O15209 634 aa16.04■□□□□ 0.16
ATRIP-208ENST00000639561 CLCN1P35523 988 aa16.04■□□□□ 0.16
ATRIP-208ENST00000639561 ME1P48163 572 aa16.04■□□□□ 0.16
ATRIP-208ENST00000639561 SNW1Q13573 536 aaKnown RBP16.04■□□□□ 0.16
ATRIP-208ENST00000639561 SEC23AQ15436 765 aa16.04■□□□□ 0.16
ATRIP-208ENST00000639561 KRT40Q6A162 431 aa16.04■□□□□ 0.16
ATRIP-208ENST00000639561 TBC1D22AQ8WUA7 517 aa16.04■□□□□ 0.16
ATRIP-208ENST00000639561 POLR3EQ9NVU0 708 aa16.04■□□□□ 0.16
ATRIP-208ENST00000639561 TAOK2Q9UL54 1235 aa16.04■□□□□ 0.16
ATRIP-208ENST00000639561 PCDHA7Q9UN72 937 aa16.04■□□□□ 0.16
ATRIP-208ENST00000639561 PPP2R3BQ9Y5P8 575 aa16.04■□□□□ 0.16
ATRIP-208ENST00000639561 TNKSO95271 1327 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms