RNA–Protein interactions for RNA: ENST00000638873.1

SPIN3-215, Transcript of spindlin family member 3, humanhuman

TSL 2

Gene SPIN3, Length 3,221 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-215ENST00000638873 PBX1P40424 430 aa13.92□□□□□ -0.18
SPIN3-215ENST00000638873 CERS3Q8IU89 383 aa13.92□□□□□ -0.18
SPIN3-215ENST00000638873 TMTC1Q8IUR5 882 aa13.92□□□□□ -0.18
SPIN3-215ENST00000638873 PPM1EQ8WY54 764 aa13.92□□□□□ -0.18
SPIN3-215ENST00000638873 COL18A1P39060 1754 aa13.92□□□□□ -0.18
SPIN3-215ENST00000638873 LRRIQ3A6PVS8 624 aaPredicted RBP13.92□□□□□ -0.18
SPIN3-215ENST00000638873 UBE2Q2LH0YL09 131 aa13.92□□□□□ -0.18
SPIN3-215ENST00000638873 MMP1P03956 469 aa13.92□□□□□ -0.18
SPIN3-215ENST00000638873 CCDC57Q2TAC2 916 aa13.92□□□□□ -0.18
SPIN3-215ENST00000638873 PTF1AQ7RTS3 328 aa13.92□□□□□ -0.18
SPIN3-215ENST00000638873 CCDC148Q8NFR7 591 aa13.92□□□□□ -0.18
SPIN3-215ENST00000638873 CEP131Q9UPN4 1083 aa13.92□□□□□ -0.18
SPIN3-215ENST00000638873 TBC1D2BQ9UPU7 963 aa13.92□□□□□ -0.18
SPIN3-215ENST00000638873 SCN11AQ9UI33 1791 aa13.92□□□□□ -0.18
SPIN3-215ENST00000638873 FMNL1O95466 1100 aaPredicted RBP13.91□□□□□ -0.18
SPIN3-215ENST00000638873 CTCFLQ8NI51 663 aaPredicted RBP13.91□□□□□ -0.18
SPIN3-215ENST00000638873 SPATA20Q8TB22 786 aa13.91□□□□□ -0.18
SPIN3-215ENST00000638873 MYO6Q9UM54 1294 aa13.91□□□□□ -0.18
SPIN3-215ENST00000638873 SLC12A7Q9Y666 1083 aa13.91□□□□□ -0.18
SPIN3-215ENST00000638873 HSPA1LP34931 641 aa13.91□□□□□ -0.18
SPIN3-215ENST00000638873 CORO7P57737 925 aa13.91□□□□□ -0.18
SPIN3-215ENST00000638873 WDR93Q6P2C0 686 aa13.91□□□□□ -0.18
SPIN3-215ENST00000638873 DHX37Q8IY37 1157 aaKnown RBP13.91□□□□□ -0.18
SPIN3-215ENST00000638873 NOA1Q8NC60 698 aaKnown RBP13.91□□□□□ -0.18
SPIN3-215ENST00000638873 NKX2-3Q8TAU0 364 aa13.91□□□□□ -0.18
SPIN3-215ENST00000638873 IGDCC4Q8TDY8 1250 aa13.91□□□□□ -0.18
SPIN3-215ENST00000638873 AFAP1L1Q8TED9 768 aa13.91□□□□□ -0.18
SPIN3-215ENST00000638873 LY9Q9HBG7 655 aa13.91□□□□□ -0.18
SPIN3-215ENST00000638873 FAM217BQ9NTX9 383 aaPredicted RBP13.91□□□□□ -0.18
SPIN3-215ENST00000638873 SRPRBQ9Y5M8 271 aaKnown RBP13.91□□□□□ -0.18
SPIN3-215ENST00000638873 RNF40O75150 1001 aa13.9□□□□□ -0.18
SPIN3-215ENST00000638873 GYPCP04921 128 aa13.9□□□□□ -0.18
SPIN3-215ENST00000638873 ATP2B1P20020 1258 aa13.9□□□□□ -0.18
SPIN3-215ENST00000638873 PI16Q6UXB8 463 aa13.9□□□□□ -0.18
SPIN3-215ENST00000638873 PACS2Q86VP3 889 aa13.9□□□□□ -0.18
SPIN3-215ENST00000638873 SGMS1Q86VZ5 419 aa13.9□□□□□ -0.18
SPIN3-215ENST00000638873 SEC31BQ9NQW1 1179 aa13.9□□□□□ -0.18
SPIN3-215ENST00000638873 KCNJ14Q9UNX9 436 aa13.9□□□□□ -0.18
SPIN3-215ENST00000638873 ABCC12Q96J65 1359 aa13.9□□□□□ -0.18
SPIN3-215ENST00000638873 SEMA3EO15041 775 aa13.9□□□□□ -0.18
SPIN3-215ENST00000638873 PPFIA4O75335 1185 aa13.9□□□□□ -0.18
SPIN3-215ENST00000638873 FXR1P51114 621 aaKnown RBP eCLIP13.9□□□□□ -0.18
SPIN3-215ENST00000638873 AKAP17AQ02040 695 aaKnown RBP13.9□□□□□ -0.18
SPIN3-215ENST00000638873 TRIM22Q8IYM9 498 aa13.9□□□□□ -0.18
SPIN3-215ENST00000638873 FOXP1Q9H334 677 aaPredicted RBP13.9□□□□□ -0.18
SPIN3-215ENST00000638873 VIPAS39Q9H9C1 493 aa13.9□□□□□ -0.18
SPIN3-215ENST00000638873 PCDHB6Q9Y5E3 794 aa13.9□□□□□ -0.18
SPIN3-215ENST00000638873 ITIH6Q6UXX5 1313 aa13.9□□□□□ -0.18
SPIN3-215ENST00000638873 ERVV-2B6SEH9 535 aa13.9□□□□□ -0.18
SPIN3-215ENST00000638873 MCM3P25205 808 aa13.9□□□□□ -0.18
SPIN3-215ENST00000638873 MAP9Q49MG5 647 aa13.9□□□□□ -0.18
SPIN3-215ENST00000638873 CDKAL1Q5VV42 579 aa13.9□□□□□ -0.18
SPIN3-215ENST00000638873 CYP26C1Q6V0L0 522 aa13.9□□□□□ -0.18
SPIN3-215ENST00000638873 CSRNP2Q9H175 543 aa13.9□□□□□ -0.18
SPIN3-215ENST00000638873 JRKLQ9Y4A0 524 aa13.9□□□□□ -0.18
SPIN3-215ENST00000638873 IFNAR1P17181 557 aa13.89□□□□□ -0.19
SPIN3-215ENST00000638873 FECHP22830 423 aa13.89□□□□□ -0.19
SPIN3-215ENST00000638873 AFMP43652 599 aa13.89□□□□□ -0.19
SPIN3-215ENST00000638873 NCAPH2Q6IBW4 605 aa13.89□□□□□ -0.19
SPIN3-215ENST00000638873 IFIT3O14879 490 aaKnown RBP13.89□□□□□ -0.19
SPIN3-215ENST00000638873 ABL1P00519 1130 aa13.89□□□□□ -0.19
SPIN3-215ENST00000638873 ADD2P35612 726 aa13.89□□□□□ -0.19
SPIN3-215ENST00000638873 ERVK-24P63145 666 aa13.89□□□□□ -0.19
SPIN3-215ENST00000638873 CUL4BQ13620 913 aa13.89□□□□□ -0.19
SPIN3-215ENST00000638873 USP49Q70CQ1 688 aa13.89□□□□□ -0.19
SPIN3-215ENST00000638873 SYNE4Q8N205 404 aa13.89□□□□□ -0.19
SPIN3-215ENST00000638873 MARCH10Q8NA82 808 aaPredicted RBP13.89□□□□□ -0.19
SPIN3-215ENST00000638873 YY1AP1Q9H869 796 aa13.89□□□□□ -0.19
SPIN3-215ENST00000638873 CD44P16070 742 aaKnown RBP13.88□□□□□ -0.19
SPIN3-215ENST00000638873 GUCY1A2P33402 732 aa13.88□□□□□ -0.19
SPIN3-215ENST00000638873 NUP88Q99567 741 aaPredicted RBP13.88□□□□□ -0.19
SPIN3-215ENST00000638873 BRMS1Q9HCU9 246 aa13.88□□□□□ -0.19
SPIN3-215ENST00000638873 FBXO3Q9UK99 471 aa13.88□□□□□ -0.19
SPIN3-215ENST00000638873 ARHGAP25P42331 645 aa13.88□□□□□ -0.19
SPIN3-215ENST00000638873 LIFRP42702 1097 aa13.88□□□□□ -0.19
SPIN3-215ENST00000638873 AARSP49588 968 aaKnown RBP eCLIP13.88□□□□□ -0.19
SPIN3-215ENST00000638873 AMPD2Q01433 879 aa13.88□□□□□ -0.19
SPIN3-215ENST00000638873 DNAJC21Q5F1R6 531 aaKnown RBP13.88□□□□□ -0.19
SPIN3-215ENST00000638873 PLEKHA4Q9H4M7 779 aa13.88□□□□□ -0.19
SPIN3-215ENST00000638873 ABHD10Q9NUJ1 306 aa13.88□□□□□ -0.19
SPIN3-215ENST00000638873 USP21Q9UK80 565 aa13.88□□□□□ -0.19
SPIN3-215ENST00000638873 ECM29Q5VYK3 1845 aa13.88□□□□□ -0.19
SPIN3-215ENST00000638873 LTBP4Q8N2S1 1624 aa13.88□□□□□ -0.19
SPIN3-215ENST00000638873 N4BP3O15049 544 aa13.88□□□□□ -0.19
SPIN3-215ENST00000638873 CCT6AP40227 531 aaKnown RBP13.88□□□□□ -0.19
SPIN3-215ENST00000638873 EFCAB13Q8IY85 973 aa13.88□□□□□ -0.19
SPIN3-215ENST00000638873 SLF1Q9BQI6 1058 aa13.88□□□□□ -0.19
SPIN3-215ENST00000638873 ANKRD65E5RJM6 399 aa13.87□□□□□ -0.19
SPIN3-215ENST00000638873 NR5A1Q13285 461 aa13.87□□□□□ -0.19
SPIN3-215ENST00000638873 SLC4A9Q96Q91 983 aa13.87□□□□□ -0.19
SPIN3-215ENST00000638873 SYF2O95926 243 aaKnown RBP13.87□□□□□ -0.19
SPIN3-215ENST00000638873 USP14P54578 494 aa13.87□□□□□ -0.19
SPIN3-215ENST00000638873 TRIM14Q14142 442 aa13.87□□□□□ -0.19
SPIN3-215ENST00000638873 SMARCC1Q92922 1105 aaPredicted RBP13.87□□□□□ -0.19
SPIN3-215ENST00000638873 RNF216Q9NWF9 866 aaPredicted RBP13.87□□□□□ -0.19
SPIN3-215ENST00000638873 ZBTB1Q9Y2K1 713 aa13.87□□□□□ -0.19
SPIN3-215ENST00000638873 SPATA31A1Q5TZJ5 1347 aa13.87□□□□□ -0.19
SPIN3-215ENST00000638873 IDH1O75874 414 aaKnown RBP13.86□□□□□ -0.19
SPIN3-215ENST00000638873 RTN1Q16799 776 aa13.86□□□□□ -0.19
SPIN3-215ENST00000638873 SMYD4Q8IYR2 804 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms