RNA–Protein interactions for RNA: ENST00000638139.1

SMARCA2-265, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 2,675 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-265ENST00000638139 MTA3Q9BTC8 594 aa11.45□□□□□ -0.58
SMARCA2-265ENST00000638139 ARFGAP3Q9NP61 516 aa11.45□□□□□ -0.58
SMARCA2-265ENST00000638139 ZCCHC17Q9NP64 241 aaKnown RBP11.45□□□□□ -0.58
SMARCA2-265ENST00000638139 LZTFL1Q9NQ48 299 aa11.45□□□□□ -0.58
SMARCA2-265ENST00000638139 CALCOCO1Q9P1Z2 691 aa11.45□□□□□ -0.58
SMARCA2-265ENST00000638139 ZBTB1Q9Y2K1 713 aa11.45□□□□□ -0.58
SMARCA2-265ENST00000638139 SYNRGQ9UMZ2 1314 aa11.45□□□□□ -0.58
SMARCA2-265ENST00000638139 TRIM75PA6NK02 468 aa11.45□□□□□ -0.58
SMARCA2-265ENST00000638139 OAS2P29728 719 aaKnown RBP11.45□□□□□ -0.58
SMARCA2-265ENST00000638139 EVA1CP58658 441 aa11.45□□□□□ -0.58
SMARCA2-265ENST00000638139 SMC1AQ14683 1233 aaKnown RBP11.45□□□□□ -0.58
SMARCA2-265ENST00000638139 EARS2Q5JPH6 523 aaKnown RBP11.45□□□□□ -0.58
SMARCA2-265ENST00000638139 CT47A1Q5JQC4 288 aaPredicted RBP11.45□□□□□ -0.58
SMARCA2-265ENST00000638139 PPFIBP1Q86W92 1011 aa11.45□□□□□ -0.58
SMARCA2-265ENST00000638139 MIGA1Q8NAN2 632 aa11.45□□□□□ -0.58
SMARCA2-265ENST00000638139 CCDC34Q96HJ3 373 aa11.45□□□□□ -0.58
SMARCA2-265ENST00000638139 FUT8Q9BYC5 575 aa11.45□□□□□ -0.58
SMARCA2-265ENST00000638139 ADD3Q9UEY8 706 aaKnown RBP11.45□□□□□ -0.58
SMARCA2-265ENST00000638139 SLIT2O94813 1529 aa11.44□□□□□ -0.58
SMARCA2-265ENST00000638139 TXLNAP40222 546 aa11.44□□□□□ -0.58
SMARCA2-265ENST00000638139 SEC23AQ15436 765 aa11.44□□□□□ -0.58
SMARCA2-265ENST00000638139 CDKAL1Q5VV42 579 aa11.44□□□□□ -0.58
SMARCA2-265ENST00000638139 UBAC1Q9BSL1 405 aa11.44□□□□□ -0.58
SMARCA2-265ENST00000638139 NAA15Q9BXJ9 866 aaKnown RBP11.44□□□□□ -0.58
SMARCA2-265ENST00000638139 VPS54Q9P1Q0 977 aa11.44□□□□□ -0.58
SMARCA2-265ENST00000638139 NHSL1Q5SYE7 1610 aa11.44□□□□□ -0.58
SMARCA2-265ENST00000638139 PLCH1Q4KWH8 1693 aa11.44□□□□□ -0.58
SMARCA2-265ENST00000638139 ABCA3Q99758 1704 aa11.44□□□□□ -0.58
SMARCA2-265ENST00000638139 BCAMP50895 628 aa11.44□□□□□ -0.58
SMARCA2-265ENST00000638139 PPARAQ07869 468 aa11.44□□□□□ -0.58
SMARCA2-265ENST00000638139 PKN1Q16512 942 aa11.44□□□□□ -0.58
SMARCA2-265ENST00000638139 SMYD4Q8IYR2 804 aaPredicted RBP11.44□□□□□ -0.58
SMARCA2-265ENST00000638139 ZNF34Q8IZ26 560 aa11.44□□□□□ -0.58
SMARCA2-265ENST00000638139 SYMPKQ92797 1274 aaKnown RBP11.44□□□□□ -0.58
SMARCA2-265ENST00000638139 RNF26Q9BY78 433 aaPredicted RBP11.44□□□□□ -0.58
SMARCA2-265ENST00000638139 RNF41Q9H4P4 317 aaPredicted RBP11.44□□□□□ -0.58
SMARCA2-265ENST00000638139 ZSWIM4Q9H7M6 989 aa11.44□□□□□ -0.58
SMARCA2-265ENST00000638139 XIRP1Q702N8 1843 aaKnown RBP11.43□□□□□ -0.58
SMARCA2-265ENST00000638139 hCG_1642624A0A1W2PR95 340 aa11.43□□□□□ -0.58
SMARCA2-265ENST00000638139 PPP1R3GB7ZBB8 358 aa11.43□□□□□ -0.58
SMARCA2-265ENST00000638139 WNT7AO00755 349 aa11.43□□□□□ -0.58
SMARCA2-265ENST00000638139 MFAP3LO75121 409 aa11.43□□□□□ -0.58
SMARCA2-265ENST00000638139 HNRNPH2P55795 449 aaKnown RBP11.43□□□□□ -0.58
SMARCA2-265ENST00000638139 ST5P78524 1137 aa11.43□□□□□ -0.58
SMARCA2-265ENST00000638139 DPYDQ12882 1025 aa11.43□□□□□ -0.58
SMARCA2-265ENST00000638139 SRGAP1Q7Z6B7 1085 aa11.43□□□□□ -0.58
SMARCA2-265ENST00000638139 PHF20Q9BVI0 1012 aa11.43□□□□□ -0.58
SMARCA2-265ENST00000638139 TNKSO95271 1327 aa11.43□□□□□ -0.58
SMARCA2-265ENST00000638139 SMIM22K7EJ46 135 aa11.43□□□□□ -0.58
SMARCA2-265ENST00000638139 PRDM1O75626 825 aa11.43□□□□□ -0.58
SMARCA2-265ENST00000638139 KRT2P35908 639 aa11.43□□□□□ -0.58
SMARCA2-265ENST00000638139 CHMP4BP1P59074 171 aa11.43□□□□□ -0.58
SMARCA2-265ENST00000638139 AKAP17AQ02040 695 aaKnown RBP11.43□□□□□ -0.58
SMARCA2-265ENST00000638139 RASGRP2Q7LDG7 609 aa11.43□□□□□ -0.58
SMARCA2-265ENST00000638139 DZIP3Q86Y13 1208 aaKnown RBP11.43□□□□□ -0.58
SMARCA2-265ENST00000638139 MINDY4BA8MYZ0 360 aa11.43□□□□□ -0.58
SMARCA2-265ENST00000638139 ERVV-1B6SEH8 477 aa11.43□□□□□ -0.58
SMARCA2-265ENST00000638139 KIF5CO60282 957 aa11.43□□□□□ -0.58
SMARCA2-265ENST00000638139 CASP14P31944 242 aa11.43□□□□□ -0.58
SMARCA2-265ENST00000638139 FUT2Q10981 343 aa11.43□□□□□ -0.58
SMARCA2-265ENST00000638139 LONRF2Q1L5Z9 754 aa11.43□□□□□ -0.58
SMARCA2-265ENST00000638139 JAKMIP3Q5VZ66 844 aa11.43□□□□□ -0.58
SMARCA2-265ENST00000638139 RTL9Q8NET4 1388 aa11.43□□□□□ -0.58
SMARCA2-265ENST00000638139 NEK11Q8NG66 645 aa11.43□□□□□ -0.58
SMARCA2-265ENST00000638139 GSDMAQ96QA5 445 aa11.43□□□□□ -0.58
SMARCA2-265ENST00000638139 CTAGE1Q96RT6 745 aa11.43□□□□□ -0.58
SMARCA2-265ENST00000638139 PUF60Q9UHX1 559 aaKnown RBP11.43□□□□□ -0.58
SMARCA2-265ENST00000638139 CDC23Q9UJX2 597 aa11.43□□□□□ -0.58
SMARCA2-265ENST00000638139 CCDC151A5D8V7 595 aa11.42□□□□□ -0.58
SMARCA2-265ENST00000638139 SEMA3EO15041 775 aa11.42□□□□□ -0.58
SMARCA2-265ENST00000638139 GYPCP04921 128 aa11.42□□□□□ -0.58
SMARCA2-265ENST00000638139 XBP1P17861 261 aa11.42□□□□□ -0.58
SMARCA2-265ENST00000638139 FXR1P51114 621 aaKnown RBP eCLIP11.42□□□□□ -0.58
SMARCA2-265ENST00000638139 BRD3Q15059 726 aa11.42□□□□□ -0.58
SMARCA2-265ENST00000638139 FILIP1LQ4L180 1135 aa11.42□□□□□ -0.58
SMARCA2-265ENST00000638139 NOM1Q5C9Z4 860 aaKnown RBP11.42□□□□□ -0.58
SMARCA2-265ENST00000638139 ZNF569Q5MCW4 686 aa11.42□□□□□ -0.58
SMARCA2-265ENST00000638139 ADGRA1Q86SQ6 560 aa11.42□□□□□ -0.58
SMARCA2-265ENST00000638139 SDR42E1Q8WUS8 393 aa11.42□□□□□ -0.58
SMARCA2-265ENST00000638139 LRP2BPQ9P2M1 347 aa11.42□□□□□ -0.58
SMARCA2-265ENST00000638139 MYH13Q9UKX3 1938 aa11.42□□□□□ -0.58
SMARCA2-265ENST00000638139 SOS2Q07890 1332 aaPredicted RBP11.42□□□□□ -0.58
SMARCA2-265ENST00000638139 BAZ2AQ9UIF9 1905 aaKnown RBP11.42□□□□□ -0.58
SMARCA2-265ENST00000638139 COBLO75128 1261 aa11.42□□□□□ -0.58
SMARCA2-265ENST00000638139 CYP7A1P22680 504 aa11.42□□□□□ -0.58
SMARCA2-265ENST00000638139 ZNF174Q15697 407 aa11.42□□□□□ -0.58
SMARCA2-265ENST00000638139 ESR2Q92731 530 aa11.42□□□□□ -0.58
SMARCA2-265ENST00000638139 FERMT2Q96AC1 680 aa11.42□□□□□ -0.58
SMARCA2-265ENST00000638139 ANKZF1Q9H8Y5 726 aa11.42□□□□□ -0.58
SMARCA2-265ENST00000638139 CTNND2Q9UQB3 1225 aa11.42□□□□□ -0.58
SMARCA2-265ENST00000638139 V9GY48 417 aaPredicted RBP11.42□□□□□ -0.58
SMARCA2-265ENST00000638139 BCL9LQ86UU0 1499 aa11.41□□□□□ -0.58
SMARCA2-265ENST00000638139 MAP2K7O14733 419 aa11.41□□□□□ -0.58
SMARCA2-265ENST00000638139 PRPF3O43395 683 aaKnown RBP11.41□□□□□ -0.58
SMARCA2-265ENST00000638139 PLEKHA8P1O95397 391 aa11.41□□□□□ -0.58
SMARCA2-265ENST00000638139 FECHP22830 423 aa11.41□□□□□ -0.58
SMARCA2-265ENST00000638139 PPP2R5BQ15173 497 aa11.41□□□□□ -0.58
SMARCA2-265ENST00000638139 SUSD4Q5VX71 490 aa11.41□□□□□ -0.58
SMARCA2-265ENST00000638139 CEP112Q8N8E3 955 aa11.41□□□□□ -0.58
SMARCA2-265ENST00000638139 ENAHQ8N8S7 591 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms