RNA–Protein interactions for RNA: ENST00000637774.1

CACNA1A-248, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,381 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-248ENST00000637774 CCDC96Q2M329 555 aa11.1□□□□□ -0.63
CACNA1A-248ENST00000637774 NOM1Q5C9Z4 860 aaKnown RBP11.1□□□□□ -0.63
CACNA1A-248ENST00000637774 USP17L2Q6R6M4 530 aa11.1□□□□□ -0.63
CACNA1A-248ENST00000637774 SRBD1Q8N5C6 995 aaKnown RBP11.1□□□□□ -0.63
CACNA1A-248ENST00000637774 PDLIM2Q96JY6 352 aa11.1□□□□□ -0.63
CACNA1A-248ENST00000637774 GPCPD1Q9NPB8 672 aa11.1□□□□□ -0.63
CACNA1A-248ENST00000637774 KIAA1468Q9P260 1216 aa11.1□□□□□ -0.63
CACNA1A-248ENST00000637774 H0YIN7 160 aa11.09□□□□□ -0.63
CACNA1A-248ENST00000637774 SF3B2Q13435 895 aaKnown RBP11.09□□□□□ -0.63
CACNA1A-248ENST00000637774 FMR1NBQ8N0W7 255 aaPredicted RBP11.09□□□□□ -0.63
CACNA1A-248ENST00000637774 FBXL16Q8N461 479 aa11.09□□□□□ -0.63
CACNA1A-248ENST00000637774 RBM28Q9NW13 759 aaKnown RBP11.09□□□□□ -0.63
CACNA1A-248ENST00000637774 HOOK1Q9UJC3 728 aaKnown RBP11.09□□□□□ -0.63
CACNA1A-248ENST00000637774 FRMPD2Q68DX3 1309 aaPredicted RBP11.09□□□□□ -0.63
CACNA1A-248ENST00000637774 PES1O00541 588 aaKnown RBP11.09□□□□□ -0.63
CACNA1A-248ENST00000637774 CMA1P23946 247 aa11.09□□□□□ -0.63
CACNA1A-248ENST00000637774 TROAPQ12815 778 aa11.09□□□□□ -0.63
CACNA1A-248ENST00000637774 LRMPQ12912 555 aa11.09□□□□□ -0.63
CACNA1A-248ENST00000637774 SEC23AQ15436 765 aa11.09□□□□□ -0.63
CACNA1A-248ENST00000637774 C12orf60Q5U649 245 aa11.09□□□□□ -0.63
CACNA1A-248ENST00000637774 ZNF772Q68DY9 489 aaPredicted RBP11.09□□□□□ -0.63
CACNA1A-248ENST00000637774 CCDC34Q96HJ3 373 aa11.09□□□□□ -0.63
CACNA1A-248ENST00000637774 FUCA2Q9BTY2 467 aa11.09□□□□□ -0.63
CACNA1A-248ENST00000637774 RNF26Q9BY78 433 aaPredicted RBP11.09□□□□□ -0.63
CACNA1A-248ENST00000637774 KCNQ5Q9NR82 932 aa11.09□□□□□ -0.63
CACNA1A-248ENST00000637774 CEP131Q9UPN4 1083 aa11.09□□□□□ -0.63
CACNA1A-248ENST00000637774 TULP1O00294 542 aaPredicted RBP11.08□□□□□ -0.64
CACNA1A-248ENST00000637774 FOXN1O15353 648 aa11.08□□□□□ -0.64
CACNA1A-248ENST00000637774 CDK8P49336 464 aa11.08□□□□□ -0.64
CACNA1A-248ENST00000637774 LONRF3Q496Y0 759 aa11.08□□□□□ -0.64
CACNA1A-248ENST00000637774 SOGA3Q5TF21 947 aa11.08□□□□□ -0.64
CACNA1A-248ENST00000637774 USP49Q70CQ1 688 aa11.08□□□□□ -0.64
CACNA1A-248ENST00000637774 NBPF11Q86T75 865 aa11.08□□□□□ -0.64
CACNA1A-248ENST00000637774 ALDH1B1P30837 517 aa11.08□□□□□ -0.64
CACNA1A-248ENST00000637774 PDE6BP35913 854 aa11.08□□□□□ -0.64
CACNA1A-248ENST00000637774 NAPAP54920 295 aa11.08□□□□□ -0.64
CACNA1A-248ENST00000637774 TPD52L1Q16890 204 aaPredicted RBP11.08□□□□□ -0.64
CACNA1A-248ENST00000637774 SHC4Q6S5L8 630 aa11.08□□□□□ -0.64
CACNA1A-248ENST00000637774 SEC63Q9UGP8 760 aaKnown RBP11.08□□□□□ -0.64
CACNA1A-248ENST00000637774 SERTAD1Q9UHV2 236 aa11.08□□□□□ -0.64
CACNA1A-248ENST00000637774 MROH7-TTC4A0A0A0MT08 1334 aa11.08□□□□□ -0.64
CACNA1A-248ENST00000637774 SCG2P13521 617 aa11.08□□□□□ -0.64
CACNA1A-248ENST00000637774 PLCG2P16885 1265 aa11.08□□□□□ -0.64
CACNA1A-248ENST00000637774 CASP1P29466 404 aa11.08□□□□□ -0.64
CACNA1A-248ENST00000637774 TMTC3Q6ZXV5 915 aa11.08□□□□□ -0.64
CACNA1A-248ENST00000637774 TBC1D22AQ8WUA7 517 aa11.08□□□□□ -0.64
CACNA1A-248ENST00000637774 KLRF2D3W0D1 207 aa11.07□□□□□ -0.64
CACNA1A-248ENST00000637774 STX17P56962 302 aa11.07□□□□□ -0.64
CACNA1A-248ENST00000637774 CFAP100Q494V2 611 aa11.07□□□□□ -0.64
CACNA1A-248ENST00000637774 EPSTI1Q96J88 318 aa11.07□□□□□ -0.64
CACNA1A-248ENST00000637774 CSRNP2Q9H175 543 aa11.07□□□□□ -0.64
CACNA1A-248ENST00000637774 ATRNO75882 1429 aa11.07□□□□□ -0.64
CACNA1A-248ENST00000637774 A0A1W2PQ27 194 aa11.07□□□□□ -0.64
CACNA1A-248ENST00000637774 A0A1W2PQ64 194 aa11.07□□□□□ -0.64
CACNA1A-248ENST00000637774 A0A1W2PQD8 194 aa11.07□□□□□ -0.64
CACNA1A-248ENST00000637774 EARS2Q5JPH6 523 aaKnown RBP11.07□□□□□ -0.64
CACNA1A-248ENST00000637774 TTC38Q5R3I4 469 aa11.07□□□□□ -0.64
CACNA1A-248ENST00000637774 ENGASEQ8NFI3 743 aa11.07□□□□□ -0.64
CACNA1A-248ENST00000637774 MYO5AQ9Y4I1 1855 aaKnown RBP11.07□□□□□ -0.64
CACNA1A-248ENST00000637774 CUTAO60888 179 aa11.07□□□□□ -0.64
CACNA1A-248ENST00000637774 PARP1P09874 1014 aaKnown RBP11.07□□□□□ -0.64
CACNA1A-248ENST00000637774 NPR1P16066 1061 aa11.07□□□□□ -0.64
CACNA1A-248ENST00000637774 AXDND1Q5T1B0 1012 aaPredicted RBP11.07□□□□□ -0.64
CACNA1A-248ENST00000637774 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.07□□□□□ -0.64
CACNA1A-248ENST00000637774 TMEM47Q9BQJ4 181 aa11.07□□□□□ -0.64
CACNA1A-248ENST00000637774 TRMT1Q9NXH9 659 aaKnown RBP11.07□□□□□ -0.64
CACNA1A-248ENST00000637774 IFNKQ9P0W0 207 aa11.07□□□□□ -0.64
CACNA1A-248ENST00000637774 ANAPC4Q9UJX5 808 aa11.07□□□□□ -0.64
CACNA1A-248ENST00000637774 PCDHA5Q9Y5H7 936 aa11.07□□□□□ -0.64
CACNA1A-248ENST00000637774 COL22A1Q8NFW1 1626 aaPredicted RBP11.06□□□□□ -0.64
CACNA1A-248ENST00000637774 ONECUT3O60422 494 aaPredicted RBP11.06□□□□□ -0.64
CACNA1A-248ENST00000637774 COBLO75128 1261 aa11.06□□□□□ -0.64
CACNA1A-248ENST00000637774 ZNF75DP51815 510 aa11.06□□□□□ -0.64
CACNA1A-248ENST00000637774 PTGDRQ13258 359 aa11.06□□□□□ -0.64
CACNA1A-248ENST00000637774 HSP90AA2PQ14568 343 aaPredicted RBP11.06□□□□□ -0.64
CACNA1A-248ENST00000637774 JAKMIP3Q5VZ66 844 aa11.06□□□□□ -0.64
CACNA1A-248ENST00000637774 TRMT44Q8IYL2 757 aaKnown RBP11.06□□□□□ -0.64
CACNA1A-248ENST00000637774 FOXP1Q9H334 677 aaPredicted RBP11.06□□□□□ -0.64
CACNA1A-248ENST00000637774 DAGLAQ9Y4D2 1042 aa11.06□□□□□ -0.64
CACNA1A-248ENST00000637774 COL4A1P02462 1669 aa11.06□□□□□ -0.64
CACNA1A-248ENST00000637774 MYH3P11055 1940 aa11.06□□□□□ -0.64
CACNA1A-248ENST00000637774 PRPF3O43395 683 aaKnown RBP11.06□□□□□ -0.64
CACNA1A-248ENST00000637774 DDAH1O94760 285 aa11.06□□□□□ -0.64
CACNA1A-248ENST00000637774 U2AF2P26368 475 aaKnown RBP eCLIP11.06□□□□□ -0.64
CACNA1A-248ENST00000637774 TOB1P50616 345 aaPredicted RBP11.06□□□□□ -0.64
CACNA1A-248ENST00000637774 EZH2Q15910 746 aaKnown RBP11.06□□□□□ -0.64
CACNA1A-248ENST00000637774 TMC6Q7Z403 805 aa11.06□□□□□ -0.64
CACNA1A-248ENST00000637774 SMARCE1Q969G3 411 aa11.06□□□□□ -0.64
CACNA1A-248ENST00000637774 CEP95Q96GE4 821 aa11.06□□□□□ -0.64
CACNA1A-248ENST00000637774 ATP6V0A2Q9Y487 856 aa11.06□□□□□ -0.64
CACNA1A-248ENST00000637774 AKAP11Q9UKA4 1901 aa11.05□□□□□ -0.64
CACNA1A-248ENST00000637774 C21orf2O43822 256 aa11.05□□□□□ -0.64
CACNA1A-248ENST00000637774 HLA-DOAP06340 250 aa11.05□□□□□ -0.64
CACNA1A-248ENST00000637774 SRGNP10124 158 aa11.05□□□□□ -0.64
CACNA1A-248ENST00000637774 INF2Q27J81 1249 aa11.05□□□□□ -0.64
CACNA1A-248ENST00000637774 LETM2Q2VYF4 491 aa11.05□□□□□ -0.64
CACNA1A-248ENST00000637774 SP8Q8IXZ3 490 aa11.05□□□□□ -0.64
CACNA1A-248ENST00000637774 TEKT1Q969V4 418 aa11.05□□□□□ -0.64
CACNA1A-248ENST00000637774 RTFDC1Q9BY42 306 aaPredicted RBP11.05□□□□□ -0.64
CACNA1A-248ENST00000637774 IL17RBQ9NRM6 502 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms