RNA–Protein interactions for RNA: ENST00000637671.1

SYNGAP1-223, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-223ENST00000637671 ATP11BQ9Y2G3 1177 aa14.39□□□□□ -0.11
SYNGAP1-223ENST00000637671 NDUFB9Q9Y6M9 179 aa14.39□□□□□ -0.11
SYNGAP1-223ENST00000637671 IGSF3O75054 1194 aa14.38□□□□□ -0.11
SYNGAP1-223ENST00000637671 HOXC6P09630 235 aa14.38□□□□□ -0.11
SYNGAP1-223ENST00000637671 CCDC158Q5M9N0 1113 aa14.38□□□□□ -0.11
SYNGAP1-223ENST00000637671 ARRDC4Q8NCT1 418 aa14.38□□□□□ -0.11
SYNGAP1-223ENST00000637671 C12orf42Q96LP6 360 aa14.38□□□□□ -0.11
SYNGAP1-223ENST00000637671 CDX2Q99626 313 aaPredicted RBP14.38□□□□□ -0.11
SYNGAP1-223ENST00000637671 SNRKQ9NRH2 765 aa14.38□□□□□ -0.11
SYNGAP1-223ENST00000637671 FLRT1Q9NZU1 646 aa14.38□□□□□ -0.11
SYNGAP1-223ENST00000637671 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.38□□□□□ -0.11
SYNGAP1-223ENST00000637671 MAST2Q6P0Q8 1798 aa14.37□□□□□ -0.11
SYNGAP1-223ENST00000637671 SIPA1L1O43166 1804 aa14.37□□□□□ -0.11
SYNGAP1-223ENST00000637671 KBTBD13C9JR72 458 aa14.37□□□□□ -0.11
SYNGAP1-223ENST00000637671 CNMDO75829 334 aa14.37□□□□□ -0.11
SYNGAP1-223ENST00000637671 GRB14Q14449 540 aa14.37□□□□□ -0.11
SYNGAP1-223ENST00000637671 POTEEQ6S8J3 1075 aa14.37□□□□□ -0.11
SYNGAP1-223ENST00000637671 CERS3Q8IU89 383 aa14.37□□□□□ -0.11
SYNGAP1-223ENST00000637671 PRDM5Q9NQX1 630 aaPredicted RBP14.37□□□□□ -0.11
SYNGAP1-223ENST00000637671 PRUNE2Q8WUY3 3088 aa14.37□□□□□ -0.11
SYNGAP1-223ENST00000637671 GNAI2P04899 355 aa14.36□□□□□ -0.11
SYNGAP1-223ENST00000637671 VCAM1P19320 739 aa14.36□□□□□ -0.11
SYNGAP1-223ENST00000637671 CYP2C19P33261 490 aa14.36□□□□□ -0.11
SYNGAP1-223ENST00000637671 RAB3GAP1Q15042 981 aa14.36□□□□□ -0.11
SYNGAP1-223ENST00000637671 CATSPERGQ6ZRH7 1159 aa14.36□□□□□ -0.11
SYNGAP1-223ENST00000637671 ADGRA1Q86SQ6 560 aa14.36□□□□□ -0.11
SYNGAP1-223ENST00000637671 DPP9Q86TI2 863 aa14.36□□□□□ -0.11
SYNGAP1-223ENST00000637671 CDCA7LQ96GN5 454 aa14.36□□□□□ -0.11
SYNGAP1-223ENST00000637671 KIAA1683Q9H0B3 1180 aa14.36□□□□□ -0.11
SYNGAP1-223ENST00000637671 MYCNP04198 464 aaPredicted RBP14.35□□□□□ -0.11
SYNGAP1-223ENST00000637671 USP5P45974 858 aa14.35□□□□□ -0.11
SYNGAP1-223ENST00000637671 OS9Q13438 667 aaPredicted RBP14.35□□□□□ -0.11
SYNGAP1-223ENST00000637671 SHHQ15465 462 aa14.35□□□□□ -0.11
SYNGAP1-223ENST00000637671 GJC2Q5T442 439 aaPredicted RBP14.35□□□□□ -0.11
SYNGAP1-223ENST00000637671 LBX2Q6XYB7 198 aa14.35□□□□□ -0.11
SYNGAP1-223ENST00000637671 ARHGAP45Q92619 1136 aa14.35□□□□□ -0.11
SYNGAP1-223ENST00000637671 SEMA6BQ9H3T3 888 aa14.35□□□□□ -0.11
SYNGAP1-223ENST00000637671 SERPINB13Q9UIV8 391 aa14.35□□□□□ -0.11
SYNGAP1-223ENST00000637671 FRMPD3Q5JV73 1810 aa14.34□□□□□ -0.11
SYNGAP1-223ENST00000637671 SPTBN5Q9NRC6 3674 aaKnown RBP14.34□□□□□ -0.11
SYNGAP1-223ENST00000637671 CYBAP13498 195 aa14.34□□□□□ -0.11
SYNGAP1-223ENST00000637671 FOSL2P15408 326 aa14.34□□□□□ -0.11
SYNGAP1-223ENST00000637671 SMAD3P84022 425 aaKnown RBP14.34□□□□□ -0.11
SYNGAP1-223ENST00000637671 ABCB5Q2M3G0 1257 aa14.34□□□□□ -0.11
SYNGAP1-223ENST00000637671 TNNI3KQ59H18 835 aa14.34□□□□□ -0.11
SYNGAP1-223ENST00000637671 OLFML2BQ68BL8 750 aa14.34□□□□□ -0.11
SYNGAP1-223ENST00000637671 TATDN1Q6P1N9 297 aa14.34□□□□□ -0.11
SYNGAP1-223ENST00000637671 TRPV1Q8NER1 839 aa14.34□□□□□ -0.11
SYNGAP1-223ENST00000637671 NPLOC4Q8TAT6 608 aa14.34□□□□□ -0.11
SYNGAP1-223ENST00000637671 EHD4Q9H223 541 aa14.34□□□□□ -0.11
SYNGAP1-223ENST00000637671 CABP5Q9NP86 173 aa14.34□□□□□ -0.11
SYNGAP1-223ENST00000637671 GPR108Q9NPR9 543 aa14.34□□□□□ -0.11
SYNGAP1-223ENST00000637671 BTBD7Q9P203 1132 aa14.34□□□□□ -0.11
SYNGAP1-223ENST00000637671 FPGT-TNNI3KV9GXZ4 949 aa14.34□□□□□ -0.11
SYNGAP1-223ENST00000637671 SPDYE16A6NNV3 312 aaPredicted RBP14.33□□□□□ -0.12
SYNGAP1-223ENST00000637671 SEPT4O43236 478 aa14.33□□□□□ -0.12
SYNGAP1-223ENST00000637671 CYP2E1P05181 493 aaPredicted RBP14.33□□□□□ -0.12
SYNGAP1-223ENST00000637671 CYP7A1P22680 504 aa14.33□□□□□ -0.12
SYNGAP1-223ENST00000637671 DYNLL1P63167 89 aaKnown RBP14.33□□□□□ -0.12
SYNGAP1-223ENST00000637671 TRIM60Q495X7 471 aa14.33□□□□□ -0.12
SYNGAP1-223ENST00000637671 CERKLQ49MI3 558 aaPredicted RBP14.33□□□□□ -0.12
SYNGAP1-223ENST00000637671 C9orf50Q5SZB4 431 aa14.33□□□□□ -0.12
SYNGAP1-223ENST00000637671 SLC39A5Q6ZMH5 540 aa14.33□□□□□ -0.12
SYNGAP1-223ENST00000637671 TTC6Q86TZ1 520 aa14.33□□□□□ -0.12
SYNGAP1-223ENST00000637671 MYLIPQ8WY64 445 aa14.33□□□□□ -0.12
SYNGAP1-223ENST00000637671 SYMPKQ92797 1274 aaKnown RBP14.33□□□□□ -0.12
SYNGAP1-223ENST00000637671 BADQ92934 168 aa14.33□□□□□ -0.12
SYNGAP1-223ENST00000637671 DBNDD2Q9BQY9 259 aa14.33□□□□□ -0.12
SYNGAP1-223ENST00000637671 RPAP3Q9H6T3 665 aaPredicted RBP14.33□□□□□ -0.12
SYNGAP1-223ENST00000637671 PRDM6Q9NQX0 595 aa14.33□□□□□ -0.12
SYNGAP1-223ENST00000637671 SLC5A4Q9NY91 659 aa14.33□□□□□ -0.12
SYNGAP1-223ENST00000637671 PNMA6EA0A0J9YXQ4 647 aa14.32□□□□□ -0.12
SYNGAP1-223ENST00000637671 IPO8O15397 1037 aaKnown RBP14.32□□□□□ -0.12
SYNGAP1-223ENST00000637671 STRNO43815 780 aa14.32□□□□□ -0.12
SYNGAP1-223ENST00000637671 IDH1O75874 414 aaKnown RBP14.32□□□□□ -0.12
SYNGAP1-223ENST00000637671 ADORA2AP29274 412 aa14.32□□□□□ -0.12
SYNGAP1-223ENST00000637671 ZAP70P43403 619 aa14.32□□□□□ -0.12
SYNGAP1-223ENST00000637671 RARSP54136 660 aaKnown RBP14.32□□□□□ -0.12
SYNGAP1-223ENST00000637671 TRMT2AQ8IZ69 625 aaKnown RBP14.32□□□□□ -0.12
SYNGAP1-223ENST00000637671 ACER1Q8TDN7 264 aa14.32□□□□□ -0.12
SYNGAP1-223ENST00000637671 ZNF512BQ96KM6 892 aaPredicted RBP14.32□□□□□ -0.12
SYNGAP1-223ENST00000637671 PIH1D3Q9NQM4 214 aaKnown RBP14.32□□□□□ -0.12
SYNGAP1-223ENST00000637671 HOXC10Q9NYD6 342 aa14.32□□□□□ -0.12
SYNGAP1-223ENST00000637671 CDH23Q9H251 3354 aa14.32□□□□□ -0.12
SYNGAP1-223ENST00000637671 LTBP2Q14767 1821 aa14.31□□□□□ -0.12
SYNGAP1-223ENST00000637671 FOCADQ5VW36 1801 aa14.31□□□□□ -0.12
SYNGAP1-223ENST00000637671 TMEM265A0A087WTH1 108 aa14.31□□□□□ -0.12
SYNGAP1-223ENST00000637671 SNX17Q15036 470 aa14.31□□□□□ -0.12
SYNGAP1-223ENST00000637671 MIGA1Q8NAN2 632 aa14.31□□□□□ -0.12
SYNGAP1-223ENST00000637671 SHCBP1Q8NEM2 672 aa14.31□□□□□ -0.12
SYNGAP1-223ENST00000637671 TANGO6Q9C0B7 1094 aa14.31□□□□□ -0.12
SYNGAP1-223ENST00000637671 PDLIM7Q9NR12 457 aa14.31□□□□□ -0.12
SYNGAP1-223ENST00000637671 TTC28Q96AY4 2481 aa14.31□□□□□ -0.12
SYNGAP1-223ENST00000637671 ZNF316A6NFI3 1004 aaPredicted RBP14.3□□□□□ -0.12
SYNGAP1-223ENST00000637671 IGHA2P01877 340 aa14.3□□□□□ -0.12
SYNGAP1-223ENST00000637671 ADCYAP1R1P41586 468 aa14.3□□□□□ -0.12
SYNGAP1-223ENST00000637671 COG2Q14746 738 aa14.3□□□□□ -0.12
SYNGAP1-223ENST00000637671 ANO1Q5XXA6 986 aa14.3□□□□□ -0.12
SYNGAP1-223ENST00000637671 TMED8Q6PL24 325 aaPredicted RBP14.3□□□□□ -0.12
SYNGAP1-223ENST00000637671 RNPC3Q96LT9 517 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms