RNA–Protein interactions for RNA: ENST00000637540.1

SCN8A-213, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 93 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-213ENST00000637540 RBM28Q9NW13 759 aaKnown RBP5.58□□□□□ -1.52
SCN8A-213ENST00000637540 MAD2L2Q9UI95 211 aa5.58□□□□□ -1.52
SCN8A-213ENST00000637540 KCNJ14Q9UNX9 436 aa5.58□□□□□ -1.52
SCN8A-213ENST00000637540 HPSEQ9Y251 543 aa5.58□□□□□ -1.52
SCN8A-213ENST00000637540 COL2A1P02458 1487 aaPredicted RBP5.58□□□□□ -1.52
SCN8A-213ENST00000637540 ATAD5Q96QE3 1844 aa5.58□□□□□ -1.52
SCN8A-213ENST00000637540 ERICH2A1L162 156 aa5.57□□□□□ -1.52
SCN8A-213ENST00000637540 WNT7AO00755 349 aa5.57□□□□□ -1.52
SCN8A-213ENST00000637540 SPTLC2O15270 562 aa5.57□□□□□ -1.52
SCN8A-213ENST00000637540 CALM1P0DP23 149 aa5.57□□□□□ -1.52
SCN8A-213ENST00000637540 CALM2P0DP24 149 aa5.57□□□□□ -1.52
SCN8A-213ENST00000637540 CALM3P0DP25 149 aa5.57□□□□□ -1.52
SCN8A-213ENST00000637540 SNHG28P0DPA3 235 aa5.57□□□□□ -1.52
SCN8A-213ENST00000637540 CMA1P23946 247 aa5.57□□□□□ -1.52
SCN8A-213ENST00000637540 USP5P45974 858 aa5.57□□□□□ -1.52
SCN8A-213ENST00000637540 KIAA2012Q0VF49 1180 aa5.57□□□□□ -1.52
SCN8A-213ENST00000637540 CCDC178Q5BJE1 867 aa5.57□□□□□ -1.52
SCN8A-213ENST00000637540 NOM1Q5C9Z4 860 aaKnown RBP5.57□□□□□ -1.52
SCN8A-213ENST00000637540 CC2D2BQ6DHV5 1058 aa5.57□□□□□ -1.52
SCN8A-213ENST00000637540 CDC42EP5Q6NZY7 148 aa5.57□□□□□ -1.52
SCN8A-213ENST00000637540 SHC4Q6S5L8 630 aa5.57□□□□□ -1.52
SCN8A-213ENST00000637540 SYNE3Q6ZMZ3 975 aa5.57□□□□□ -1.52
SCN8A-213ENST00000637540 SH3BP5LQ7L8J4 393 aa5.57□□□□□ -1.52
SCN8A-213ENST00000637540 NOSTRINQ8IVI9 506 aa5.57□□□□□ -1.52
SCN8A-213ENST00000637540 ZFPM1Q8IX07 1006 aa5.57□□□□□ -1.52
SCN8A-213ENST00000637540 CCAR1Q8IX12 1150 aaKnown RBP5.57□□□□□ -1.52
SCN8A-213ENST00000637540 SLF2Q8IX21 1173 aa5.57□□□□□ -1.52
SCN8A-213ENST00000637540 STAG2Q8N3U4 1231 aa5.57□□□□□ -1.52
SCN8A-213ENST00000637540 CNKSR1Q969H4 720 aa5.57□□□□□ -1.52
SCN8A-213ENST00000637540 ZNF622Q969S3 477 aaKnown RBP eCLIP5.57□□□□□ -1.52
SCN8A-213ENST00000637540 TMEM47Q9BQJ4 181 aa5.57□□□□□ -1.52
SCN8A-213ENST00000637540 IDI2Q9BXS1 227 aa5.57□□□□□ -1.52
SCN8A-213ENST00000637540 DNAJC18Q9H819 358 aa5.57□□□□□ -1.52
SCN8A-213ENST00000637540 TOMM22Q9NS69 142 aa5.57□□□□□ -1.52
SCN8A-213ENST00000637540 STK32BQ9NY57 414 aa5.57□□□□□ -1.52
SCN8A-213ENST00000637540 FAM198AQ9UFP1 575 aa5.57□□□□□ -1.52
SCN8A-213ENST00000637540 SAP30BPQ9UHR5 308 aaKnown RBP5.57□□□□□ -1.52
SCN8A-213ENST00000637540 PCDHAC2Q9Y5I4 1007 aa5.57□□□□□ -1.52
SCN8A-213ENST00000637540 MRVI1Q9Y6F6 885 aa5.57□□□□□ -1.52
SCN8A-213ENST00000637540 V9GY48 417 aaPredicted RBP5.57□□□□□ -1.52
SCN8A-213ENST00000637540 SBF1O95248 1867 aa5.57□□□□□ -1.52
SCN8A-213ENST00000637540 POLR2AP24928 1970 aaKnown RBP5.56□□□□□ -1.52
SCN8A-213ENST00000637540 PARP14Q460N5 1801 aa5.56□□□□□ -1.52
SCN8A-213ENST00000637540 FAM205CA6NFA0 338 aa5.56□□□□□ -1.52
SCN8A-213ENST00000637540 EDIL3O43854 480 aa5.56□□□□□ -1.52
SCN8A-213ENST00000637540 ECE2O60344 883 aa5.56□□□□□ -1.52
SCN8A-213ENST00000637540 SLC3A2P08195 630 aaKnown RBP5.56□□□□□ -1.52
SCN8A-213ENST00000637540 SLURP2P0DP57 97 aa5.56□□□□□ -1.52
SCN8A-213ENST00000637540 PTPREP23469 700 aa5.56□□□□□ -1.52
SCN8A-213ENST00000637540 SMARCA1P28370 1054 aa5.56□□□□□ -1.52
SCN8A-213ENST00000637540 SHMT1P34896 483 aa5.56□□□□□ -1.52
SCN8A-213ENST00000637540 CRKP46108 304 aa5.56□□□□□ -1.52
SCN8A-213ENST00000637540 NDUFA8P51970 172 aa5.56□□□□□ -1.52
SCN8A-213ENST00000637540 MDM2Q00987 491 aaPredicted RBP5.56□□□□□ -1.52
SCN8A-213ENST00000637540 CEBPZQ03701 1054 aaKnown RBP5.56□□□□□ -1.52
SCN8A-213ENST00000637540 GRIN1Q05586 938 aa5.56□□□□□ -1.52
SCN8A-213ENST00000637540 FAM160A1Q05DH4 1040 aa5.56□□□□□ -1.52
SCN8A-213ENST00000637540 CCDC173Q0VFZ6 552 aa5.56□□□□□ -1.52
SCN8A-213ENST00000637540 NFIAQ12857 509 aa5.56□□□□□ -1.52
SCN8A-213ENST00000637540 NR5A1Q13285 461 aa5.56□□□□□ -1.52
SCN8A-213ENST00000637540 IQCB1Q15051 598 aa5.56□□□□□ -1.52
SCN8A-213ENST00000637540 SF3A1Q15459 793 aaKnown RBP5.56□□□□□ -1.52
SCN8A-213ENST00000637540 MAP3K11Q16584 847 aa5.56□□□□□ -1.52
SCN8A-213ENST00000637540 PFKFB3Q16875 520 aaPredicted RBP5.56□□□□□ -1.52
SCN8A-213ENST00000637540 RESP18Q5W5W9 173 aa5.56□□□□□ -1.52
SCN8A-213ENST00000637540 TYW1BQ6NUM6 668 aa5.56□□□□□ -1.52
SCN8A-213ENST00000637540 RASGRP2Q7LDG7 609 aa5.56□□□□□ -1.52
SCN8A-213ENST00000637540 CATIPQ7Z7H3 387 aa5.56□□□□□ -1.52
SCN8A-213ENST00000637540 SIAH1Q8IUQ4 282 aa5.56□□□□□ -1.52
SCN8A-213ENST00000637540 DIS3L2Q8IYB7 885 aaKnown RBP5.56□□□□□ -1.52
SCN8A-213ENST00000637540 ELOA2Q8IYF1 753 aaPredicted RBP5.56□□□□□ -1.52
SCN8A-213ENST00000637540 C4orf32Q8N8J7 132 aa5.56□□□□□ -1.52
SCN8A-213ENST00000637540 FSIP1Q8NA03 581 aa5.56□□□□□ -1.52
SCN8A-213ENST00000637540 PNMA1Q8ND90 353 aa5.56□□□□□ -1.52
SCN8A-213ENST00000637540 KCNG4Q8TDN1 519 aa5.56□□□□□ -1.52
SCN8A-213ENST00000637540 NUP133Q8WUM0 1156 aa5.56□□□□□ -1.52
SCN8A-213ENST00000637540 WASF1Q92558 559 aa5.56□□□□□ -1.52
SCN8A-213ENST00000637540 ZBED3Q96IU2 234 aaPredicted RBP5.56□□□□□ -1.52
SCN8A-213ENST00000637540 PSMD1Q99460 953 aa5.56□□□□□ -1.52
SCN8A-213ENST00000637540 EYA3Q99504 573 aa5.56□□□□□ -1.52
SCN8A-213ENST00000637540 SGIP1Q9BQI5 828 aa5.56□□□□□ -1.52
SCN8A-213ENST00000637540 OSBPL5Q9H0X9 879 aaPredicted RBP5.56□□□□□ -1.52
SCN8A-213ENST00000637540 NUP62CLQ9H1M0 184 aa5.56□□□□□ -1.52
SCN8A-213ENST00000637540 EHD4Q9H223 541 aa5.56□□□□□ -1.52
SCN8A-213ENST00000637540 RIOX1Q9H6W3 641 aa5.56□□□□□ -1.52
SCN8A-213ENST00000637540 DBNDD1Q9H9R9 158 aa5.56□□□□□ -1.52
SCN8A-213ENST00000637540 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.56□□□□□ -1.52
SCN8A-213ENST00000637540 FBXO2Q9UK22 296 aaPredicted RBP5.56□□□□□ -1.52
SCN8A-213ENST00000637540 TTF2Q9UNY4 1162 aaKnown RBP5.56□□□□□ -1.52
SCN8A-213ENST00000637540 ATRNL1Q5VV63 1379 aa5.55□□□□□ -1.52
SCN8A-213ENST00000637540 A0A1B0GVL5 298 aa5.55□□□□□ -1.52
SCN8A-213ENST00000637540 hCG_1642624A0A1W2PR95 340 aa5.55□□□□□ -1.52
SCN8A-213ENST00000637540 TSPY2A6NKD2 308 aa5.55□□□□□ -1.52
SCN8A-213ENST00000637540 VIL1P09327 827 aaKnown RBP5.55□□□□□ -1.52
SCN8A-213ENST00000637540 TOP1P11387 765 aaKnown RBP5.55□□□□□ -1.52
SCN8A-213ENST00000637540 SCG2P13521 617 aa5.55□□□□□ -1.52
SCN8A-213ENST00000637540 BAG6P46379 1132 aa5.55□□□□□ -1.52
SCN8A-213ENST00000637540 SCNN1DP51172 638 aa5.55□□□□□ -1.52
SCN8A-213ENST00000637540 TYRO3Q06418 890 aa5.55□□□□□ -1.52
SCN8A-213ENST00000637540 STK38Q15208 465 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms