RNA–Protein interactions for RNA: ENST00000637485.1

CACNA1A-242, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 5,481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-242ENST00000637485 NECAB1Q8N987 351 aa10.74□□□□□ -0.69
CACNA1A-242ENST00000637485 UIMC1Q96RL1 719 aa10.74□□□□□ -0.69
CACNA1A-242ENST00000637485 CHL1O00533 1208 aa10.74□□□□□ -0.69
CACNA1A-242ENST00000637485 WTAPQ15007 396 aa10.74□□□□□ -0.69
CACNA1A-242ENST00000637485 SEPT2Q15019 361 aa10.74□□□□□ -0.69
CACNA1A-242ENST00000637485 TERF2Q15554 542 aa10.74□□□□□ -0.69
CACNA1A-242ENST00000637485 CCDC82Q8N4S0 544 aa10.74□□□□□ -0.69
CACNA1A-242ENST00000637485 TCP11Q8WWU5 503 aa10.74□□□□□ -0.69
CACNA1A-242ENST00000637485 CBX8Q9HC52 389 aa10.74□□□□□ -0.69
CACNA1A-242ENST00000637485 KRT15P19012 456 aa10.74□□□□□ -0.69
CACNA1A-242ENST00000637485 GNAT2P19087 354 aa10.74□□□□□ -0.69
CACNA1A-242ENST00000637485 CHMLP26374 656 aa10.74□□□□□ -0.69
CACNA1A-242ENST00000637485 MICU3Q86XE3 530 aa10.74□□□□□ -0.69
CACNA1A-242ENST00000637485 SLC26A6Q9BXS9 759 aa10.74□□□□□ -0.69
CACNA1A-242ENST00000637485 ZBTB43O43298 467 aa10.74□□□□□ -0.69
CACNA1A-242ENST00000637485 ARHGEF9O43307 516 aa10.74□□□□□ -0.69
CACNA1A-242ENST00000637485 ATP1A2P50993 1020 aa10.74□□□□□ -0.69
CACNA1A-242ENST00000637485 ASIC1P78348 528 aa10.74□□□□□ -0.69
CACNA1A-242ENST00000637485 ITIH3Q06033 890 aa10.74□□□□□ -0.69
CACNA1A-242ENST00000637485 FBXO18Q8NFZ0 1043 aa10.74□□□□□ -0.69
CACNA1A-242ENST00000637485 ERMNQ8TAM6 284 aa10.74□□□□□ -0.69
CACNA1A-242ENST00000637485 USP26Q9BXU7 913 aa10.74□□□□□ -0.69
CACNA1A-242ENST00000637485 SAR1BQ9Y6B6 198 aa10.74□□□□□ -0.69
CACNA1A-242ENST00000637485 ZFYVE16Q7Z3T8 1539 aa10.73□□□□□ -0.69
CACNA1A-242ENST00000637485 TSPY2A6NKD2 308 aa10.73□□□□□ -0.69
CACNA1A-242ENST00000637485 RNF113AO15541 343 aaKnown RBP10.73□□□□□ -0.69
CACNA1A-242ENST00000637485 CRCPO75575 148 aa10.73□□□□□ -0.69
CACNA1A-242ENST00000637485 ALG1Q9BT22 464 aa10.73□□□□□ -0.69
CACNA1A-242ENST00000637485 KCNA6P17658 529 aa10.73□□□□□ -0.69
CACNA1A-242ENST00000637485 ESR2Q92731 530 aa10.73□□□□□ -0.69
CACNA1A-242ENST00000637485 SYNMO15061 1565 aa10.73□□□□□ -0.69
CACNA1A-242ENST00000637485 HNRNPCP07910 306 aaKnown RBP eCLIP10.73□□□□□ -0.69
CACNA1A-242ENST00000637485 SERPINB6P35237 376 aa10.73□□□□□ -0.69
CACNA1A-242ENST00000637485 MRPS9P82933 396 aaKnown RBP10.73□□□□□ -0.69
CACNA1A-242ENST00000637485 NBPF10Q6P3W6 841 aaKnown RBP10.73□□□□□ -0.69
CACNA1A-242ENST00000637485 Q6ZUG5 572 aa10.73□□□□□ -0.69
CACNA1A-242ENST00000637485 NFATC2IPQ8NCF5 419 aa10.73□□□□□ -0.69
CACNA1A-242ENST00000637485 JARID2Q92833 1246 aaPredicted RBP10.73□□□□□ -0.69
CACNA1A-242ENST00000637485 YIPF3Q9GZM5 350 aa10.73□□□□□ -0.69
CACNA1A-242ENST00000637485 KIAA0232Q92628 1395 aa10.73□□□□□ -0.69
CACNA1A-242ENST00000637485 KDM5CP41229 1560 aa10.73□□□□□ -0.69
CACNA1A-242ENST00000637485 GJC1P36383 396 aa10.73□□□□□ -0.69
CACNA1A-242ENST00000637485 PPP2R5EQ16537 467 aa10.73□□□□□ -0.69
CACNA1A-242ENST00000637485 DHX58Q96C10 678 aa10.73□□□□□ -0.69
CACNA1A-242ENST00000637485 CCDC51Q96ER9 411 aa10.73□□□□□ -0.69
CACNA1A-242ENST00000637485 TUBB6Q9BUF5 446 aa10.73□□□□□ -0.69
CACNA1A-242ENST00000637485 MRPL46Q9H2W6 279 aaKnown RBP10.73□□□□□ -0.69
CACNA1A-242ENST00000637485 ANGPTL2Q9UKU9 493 aa10.73□□□□□ -0.69
CACNA1A-242ENST00000637485 MYOM2P54296 1465 aa10.73□□□□□ -0.69
CACNA1A-242ENST00000637485 SYF2O95926 243 aaKnown RBP10.72□□□□□ -0.69
CACNA1A-242ENST00000637485 EEF1DP29692 281 aaKnown RBP10.72□□□□□ -0.69
CACNA1A-242ENST00000637485 MARCKSP29966 332 aaPredicted RBP10.72□□□□□ -0.69
CACNA1A-242ENST00000637485 LONP1P36776 959 aaKnown RBP10.72□□□□□ -0.69
CACNA1A-242ENST00000637485 ETF1P62495 437 aaKnown RBP10.72□□□□□ -0.69
CACNA1A-242ENST00000637485 LEO1Q8WVC0 666 aaPredicted RBP10.72□□□□□ -0.69
CACNA1A-242ENST00000637485 SAMD9LQ8IVG5 1584 aa10.72□□□□□ -0.69
CACNA1A-242ENST00000637485 ST5P78524 1137 aa10.72□□□□□ -0.69
CACNA1A-242ENST00000637485 PPP1R12AO14974 1030 aaPredicted RBP10.72□□□□□ -0.69
CACNA1A-242ENST00000637485 SERPINI2O75830 405 aa10.72□□□□□ -0.69
CACNA1A-242ENST00000637485 GEN1Q17RS7 908 aa10.72□□□□□ -0.69
CACNA1A-242ENST00000637485 SYCE1Q8N0S2 351 aa10.72□□□□□ -0.69
CACNA1A-242ENST00000637485 ANKRD42Q8N9B4 389 aa10.72□□□□□ -0.69
CACNA1A-242ENST00000637485 RFC4P35249 363 aa10.72□□□□□ -0.69
CACNA1A-242ENST00000637485 NEK2P51955 445 aa10.72□□□□□ -0.69
CACNA1A-242ENST00000637485 STX17P56962 302 aa10.72□□□□□ -0.69
CACNA1A-242ENST00000637485 DEUP1Q05D60 604 aa10.72□□□□□ -0.69
CACNA1A-242ENST00000637485 KRT24Q2M2I5 525 aa10.72□□□□□ -0.69
CACNA1A-242ENST00000637485 NBPF6Q5VWK0 638 aa10.72□□□□□ -0.69
CACNA1A-242ENST00000637485 CREB3L3Q68CJ9 461 aa10.72□□□□□ -0.69
CACNA1A-242ENST00000637485 NBPF5PQ86XG9 351 aaPredicted RBP10.72□□□□□ -0.69
CACNA1A-242ENST00000637485 MSANTD4Q8NCY6 345 aa10.72□□□□□ -0.69
CACNA1A-242ENST00000637485 PDZD8Q8NEN9 1154 aa10.72□□□□□ -0.69
CACNA1A-242ENST00000637485 CEP70Q8NHQ1 597 aa10.72□□□□□ -0.69
CACNA1A-242ENST00000637485 KLHL29Q96CT2 875 aa10.72□□□□□ -0.69
CACNA1A-242ENST00000637485 NRBF2Q96F24 287 aa10.72□□□□□ -0.69
CACNA1A-242ENST00000637485 RMDN2Q96LZ7 410 aa10.72□□□□□ -0.69
CACNA1A-242ENST00000637485 NBPF4Q96M43 638 aa10.72□□□□□ -0.69
CACNA1A-242ENST00000637485 TXLNGQ9NUQ3 528 aa10.72□□□□□ -0.69
CACNA1A-242ENST00000637485 PA2G4Q9UQ80 394 aaKnown RBP10.72□□□□□ -0.69
CACNA1A-242ENST00000637485 LMNAP02545 664 aaKnown RBP10.71□□□□□ -0.69
CACNA1A-242ENST00000637485 HLA-DOAP06340 250 aa10.71□□□□□ -0.69
CACNA1A-242ENST00000637485 GNAQP50148 359 aa10.71□□□□□ -0.69
CACNA1A-242ENST00000637485 SDCCAG3Q96C92 435 aa10.71□□□□□ -0.69
CACNA1A-242ENST00000637485 IQCDQ96DY2 449 aa10.71□□□□□ -0.69
CACNA1A-242ENST00000637485 NYXQ9GZU5 481 aa10.71□□□□□ -0.69
CACNA1A-242ENST00000637485 DAAM1Q9Y4D1 1078 aa10.71□□□□□ -0.69
CACNA1A-242ENST00000637485 CAPRIN2Q6IMN6 1127 aaKnown RBP10.71□□□□□ -0.69
CACNA1A-242ENST00000637485 NUDCD3Q8IVD9 361 aa10.71□□□□□ -0.69
CACNA1A-242ENST00000637485 HELLSQ9NRZ9 838 aa10.71□□□□□ -0.69
CACNA1A-242ENST00000637485 SLC4A4Q9Y6R1 1079 aa10.71□□□□□ -0.69
CACNA1A-242ENST00000637485 PLEKHG3A1L390 1219 aa10.71□□□□□ -0.69
CACNA1A-242ENST00000637485 TRIM75PA6NK02 468 aa10.71□□□□□ -0.69
CACNA1A-242ENST00000637485 CYP7A1P22680 504 aa10.71□□□□□ -0.69
CACNA1A-242ENST00000637485 SLC9C1Q4G0N8 1177 aa10.71□□□□□ -0.69
CACNA1A-242ENST00000637485 WDR78Q5VTH9 848 aa10.71□□□□□ -0.69
CACNA1A-242ENST00000637485 KLHL7Q8IXQ5 586 aa10.71□□□□□ -0.69
CACNA1A-242ENST00000637485 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.71□□□□□ -0.69
CACNA1A-242ENST00000637485 CXorf56Q9H5V9 222 aa10.71□□□□□ -0.69
CACNA1A-242ENST00000637485 SH3BP5O60239 455 aa10.71□□□□□ -0.7
CACNA1A-242ENST00000637485 RTN1Q16799 776 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms