RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 CCDC196A0A1B0GTZ2 297 aa15.97■□□□□ 0.15
CACNA1A-228ENST00000636610 TADA3O75528 432 aa15.97■□□□□ 0.15
CACNA1A-228ENST00000636610 PPFIBP1Q86W92 1011 aa15.97■□□□□ 0.15
CACNA1A-228ENST00000636610 NUTM2AQ8IVF1 878 aaPredicted RBP15.97■□□□□ 0.15
CACNA1A-228ENST00000636610 MLKLQ8NB16 471 aa15.97■□□□□ 0.15
CACNA1A-228ENST00000636610 ACRBPQ8NEB7 543 aa15.97■□□□□ 0.15
CACNA1A-228ENST00000636610 PAGE5Q96GU1 130 aa15.97■□□□□ 0.15
CACNA1A-228ENST00000636610 ZNF18P17022 549 aa15.97■□□□□ 0.15
CACNA1A-228ENST00000636610 PLA2G4AP47712 749 aa15.97■□□□□ 0.15
CACNA1A-228ENST00000636610 RASSF8Q8NHQ8 419 aa15.97■□□□□ 0.15
CACNA1A-228ENST00000636610 GPKOWQ92917 476 aaPredicted RBP eCLIP15.97■□□□□ 0.15
CACNA1A-228ENST00000636610 ZSCAN10Q96SZ4 725 aaPredicted RBP15.97■□□□□ 0.15
CACNA1A-228ENST00000636610 TFR2Q9UP52 801 aa15.97■□□□□ 0.15
CACNA1A-228ENST00000636610 CATIPQ7Z7H3 387 aa15.96■□□□□ 0.15
CACNA1A-228ENST00000636610 ZFP91Q96JP5 570 aaPredicted RBP15.96■□□□□ 0.15
CACNA1A-228ENST00000636610 C4AP0C0L4 1744 aa15.96■□□□□ 0.15
CACNA1A-228ENST00000636610 C4BP0C0L5 1744 aa15.96■□□□□ 0.15
CACNA1A-228ENST00000636610 SYNRGQ9UMZ2 1314 aa15.96■□□□□ 0.15
CACNA1A-228ENST00000636610 KCNQ2O43526 872 aa15.96■□□□□ 0.15
CACNA1A-228ENST00000636610 SASH3O75995 380 aa15.96■□□□□ 0.15
CACNA1A-228ENST00000636610 KIF20AO95235 890 aa15.96■□□□□ 0.15
CACNA1A-228ENST00000636610 KRT2P35908 639 aa15.96■□□□□ 0.15
CACNA1A-228ENST00000636610 IL6STP40189 918 aaPredicted RBP15.96■□□□□ 0.15
CACNA1A-228ENST00000636610 RRAGBQ5VZM2 374 aa15.96■□□□□ 0.15
CACNA1A-228ENST00000636610 ENOX1Q8TC92 643 aaKnown RBP15.96■□□□□ 0.15
CACNA1A-228ENST00000636610 CDC5LQ99459 802 aaKnown RBP15.96■□□□□ 0.15
CACNA1A-228ENST00000636610 KCND1Q9NSA2 647 aa15.96■□□□□ 0.15
CACNA1A-228ENST00000636610 TAB2Q9NYJ8 693 aa15.96■□□□□ 0.15
CACNA1A-228ENST00000636610 PHLPP2Q6ZVD8 1323 aa15.96■□□□□ 0.14
CACNA1A-228ENST00000636610 AKR1B15C9JRZ8 316 aaPredicted RBP15.95■□□□□ 0.14
CACNA1A-228ENST00000636610 ITPK1Q13572 414 aa15.95■□□□□ 0.14
CACNA1A-228ENST00000636610 ZNF569Q5MCW4 686 aa15.95■□□□□ 0.14
CACNA1A-228ENST00000636610 RNF41Q9H4P4 317 aaPredicted RBP15.95■□□□□ 0.14
CACNA1A-228ENST00000636610 FAM237AA0A1B0GTK4 181 aa15.95■□□□□ 0.14
CACNA1A-228ENST00000636610 RNF225M0QZC1 329 aaPredicted RBP15.95■□□□□ 0.14
CACNA1A-228ENST00000636610 SARSP49591 514 aaKnown RBP15.95■□□□□ 0.14
CACNA1A-228ENST00000636610 PLCD1P51178 756 aa15.95■□□□□ 0.14
CACNA1A-228ENST00000636610 NLRP5P59047 1200 aa15.95■□□□□ 0.14
CACNA1A-228ENST00000636610 ERFEQ4G0M1 354 aa15.95■□□□□ 0.14
CACNA1A-228ENST00000636610 WWC2Q6AWC2 1192 aa15.95■□□□□ 0.14
CACNA1A-228ENST00000636610 INTS5Q6P9B9 1019 aaKnown RBP15.95■□□□□ 0.14
CACNA1A-228ENST00000636610 HINFPQ9BQA5 517 aa15.95■□□□□ 0.14
CACNA1A-228ENST00000636610 A0A0U1RQG5 324 aaPredicted RBP15.94■□□□□ 0.14
CACNA1A-228ENST00000636610 PP2D1A8MPX8 630 aa15.94■□□□□ 0.14
CACNA1A-228ENST00000636610 CCP110O43303 1012 aa15.94■□□□□ 0.14
CACNA1A-228ENST00000636610 FXR1P51114 621 aaKnown RBP eCLIP15.94■□□□□ 0.14
CACNA1A-228ENST00000636610 GABPB1Q06547 395 aaPredicted RBP15.94■□□□□ 0.14
CACNA1A-228ENST00000636610 TBX2Q13207 712 aaPredicted RBP15.94■□□□□ 0.14
CACNA1A-228ENST00000636610 CUL4BQ13620 913 aa15.94■□□□□ 0.14
CACNA1A-228ENST00000636610 NR1I3Q14994 352 aa15.94■□□□□ 0.14
CACNA1A-228ENST00000636610 NEK11Q8NG66 645 aa15.94■□□□□ 0.14
CACNA1A-228ENST00000636610 CPVLQ9H3G5 476 aa15.94■□□□□ 0.14
CACNA1A-228ENST00000636610 CCDC87Q9NVE4 849 aa15.94■□□□□ 0.14
CACNA1A-228ENST00000636610 ARGLU1Q9NWB6 273 aaPredicted RBP15.94■□□□□ 0.14
CACNA1A-228ENST00000636610 STK36Q9NRP7 1315 aa15.94■□□□□ 0.14
CACNA1A-228ENST00000636610 N4BP3O15049 544 aa15.94■□□□□ 0.14
CACNA1A-228ENST00000636610 STX10O60499 249 aa15.94■□□□□ 0.14
CACNA1A-228ENST00000636610 ERCC3P19447 782 aa15.94■□□□□ 0.14
CACNA1A-228ENST00000636610 EIF5P55010 431 aaKnown RBP15.94■□□□□ 0.14
CACNA1A-228ENST00000636610 MAPK8IP2Q13387 824 aaPredicted RBP15.94■□□□□ 0.14
CACNA1A-228ENST00000636610 DHX8Q14562 1220 aaKnown RBP15.94■□□□□ 0.14
CACNA1A-228ENST00000636610 SEC23AQ15436 765 aa15.94■□□□□ 0.14
CACNA1A-228ENST00000636610 PARD6BQ9BYG5 372 aa15.94■□□□□ 0.14
CACNA1A-228ENST00000636610 SUGCTQ9HAC7 445 aa15.94■□□□□ 0.14
CACNA1A-228ENST00000636610 GDAQ9Y2T3 454 aa15.94■□□□□ 0.14
CACNA1A-228ENST00000636610 MYH7P12883 1935 aa15.94■□□□□ 0.14
CACNA1A-228ENST00000636610 RHOXF2BP0C7M4 288 aa15.94■□□□□ 0.14
CACNA1A-228ENST00000636610 XBP1P17861 261 aa15.94■□□□□ 0.14
CACNA1A-228ENST00000636610 TTC38Q5R3I4 469 aa15.94■□□□□ 0.14
CACNA1A-228ENST00000636610 RASGRP2Q7LDG7 609 aa15.94■□□□□ 0.14
CACNA1A-228ENST00000636610 IQCA1Q86XH1 822 aa15.94■□□□□ 0.14
CACNA1A-228ENST00000636610 SRBD1Q8N5C6 995 aaKnown RBP15.94■□□□□ 0.14
CACNA1A-228ENST00000636610 ZNF384Q8TF68 577 aa15.94■□□□□ 0.14
CACNA1A-228ENST00000636610 CELF1Q92879 486 aaKnown RBP15.94■□□□□ 0.14
CACNA1A-228ENST00000636610 RHOXF2Q9BQY4 288 aa15.94■□□□□ 0.14
CACNA1A-228ENST00000636610 DACH1Q9UI36 760 aa15.94■□□□□ 0.14
CACNA1A-228ENST00000636610 CEP131Q9UPN4 1083 aa15.94■□□□□ 0.14
CACNA1A-228ENST00000636610 NUTM2BA6NNL0 878 aaPredicted RBP15.93■□□□□ 0.14
CACNA1A-228ENST00000636610 NUTM2EB1AL46 878 aaPredicted RBP15.93■□□□□ 0.14
CACNA1A-228ENST00000636610 PRDX5P30044 214 aa15.93■□□□□ 0.14
CACNA1A-228ENST00000636610 SPEF2Q9C093 1822 aa15.93■□□□□ 0.14
CACNA1A-228ENST00000636610 ATRNO75882 1429 aa15.93■□□□□ 0.14
CACNA1A-228ENST00000636610 TRIM49BA6NDI0 452 aa15.93■□□□□ 0.14
CACNA1A-228ENST00000636610 GNAT2P19087 354 aa15.93■□□□□ 0.14
CACNA1A-228ENST00000636610 MCM6Q14566 821 aa15.93■□□□□ 0.14
CACNA1A-228ENST00000636610 KIF4BQ2VIQ3 1234 aa15.93■□□□□ 0.14
CACNA1A-228ENST00000636610 NUP88Q99567 741 aaPredicted RBP15.93■□□□□ 0.14
CACNA1A-228ENST00000636610 LOC102724428A0A0B4J2F2 783 aa15.92■□□□□ 0.14
CACNA1A-228ENST00000636610 CCDC175P0C221 793 aa15.92■□□□□ 0.14
CACNA1A-228ENST00000636610 SIK1P57059 783 aa15.92■□□□□ 0.14
CACNA1A-228ENST00000636610 ST5P78524 1137 aa15.92■□□□□ 0.14
CACNA1A-228ENST00000636610 TMTC2Q8N394 836 aa15.92■□□□□ 0.14
CACNA1A-228ENST00000636610 SLF1Q9BQI6 1058 aa15.92■□□□□ 0.14
CACNA1A-228ENST00000636610 TRIM10Q9UDY6 481 aa15.92■□□□□ 0.14
CACNA1A-228ENST00000636610 BCL9O00512 1426 aa15.92■□□□□ 0.14
CACNA1A-228ENST00000636610 SLIT2O94813 1529 aa15.92■□□□□ 0.14
CACNA1A-228ENST00000636610 ERVV-1B6SEH8 477 aa15.92■□□□□ 0.14
CACNA1A-228ENST00000636610 TOGARAM1Q9Y4F4 1720 aa15.92■□□□□ 0.14
CACNA1A-228ENST00000636610 EFCAB8A8MWE9 144 aa15.92■□□□□ 0.14
CACNA1A-228ENST00000636610 CAMTA2O94983 1202 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms