RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	OTUD6B	Q8N6M0	293 aa		12.17	□□□□□ -0.46
CHD2-223	ENST00000636306	NECAB1	Q8N987	351 aa		12.17	□□□□□ -0.46
CHD2-223	ENST00000636306	FAM76A	Q8TAV0	307 aa		12.17	□□□□□ -0.46
CHD2-223	ENST00000636306	ZNF396	Q96N95	335 aa	Predicted RBP	12.17	□□□□□ -0.46
CHD2-223	ENST00000636306	PUS3	Q9BZE2	481 aa	Known RBP	12.17	□□□□□ -0.46
CHD2-223	ENST00000636306	PLEKHA4	Q9H4M7	779 aa		12.17	□□□□□ -0.46
CHD2-223	ENST00000636306	TPCN1	Q9ULQ1	816 aa		12.17	□□□□□ -0.46
CHD2-223	ENST00000636306	IPO7	O95373	1038 aa	Known RBP	12.16	□□□□□ -0.46
CHD2-223	ENST00000636306	PIP4K2B	P78356	416 aa		12.16	□□□□□ -0.46
CHD2-223	ENST00000636306	DRP2	Q13474	957 aa		12.16	□□□□□ -0.46
CHD2-223	ENST00000636306	VPS72	Q15906	364 aa		12.16	□□□□□ -0.46
CHD2-223	ENST00000636306	RCSD1	Q6JBY9	416 aa		12.16	□□□□□ -0.46
CHD2-223	ENST00000636306	MARCH10	Q8NA82	808 aa	Predicted RBP	12.16	□□□□□ -0.46
CHD2-223	ENST00000636306	CCDC12	Q8WUD4	166 aa	Predicted RBP	12.16	□□□□□ -0.46
CHD2-223	ENST00000636306	BAG1	Q99933	345 aa	Predicted RBP	12.16	□□□□□ -0.46
CHD2-223	ENST00000636306	GREM2	Q9H772	168 aa		12.16	□□□□□ -0.46
CHD2-223	ENST00000636306	BATF3	Q9NR55	127 aa		12.16	□□□□□ -0.46
CHD2-223	ENST00000636306	GGA2	Q9UJY4	613 aa		12.16	□□□□□ -0.46
CHD2-223	ENST00000636306	RIPOR2	Q9Y4F9	1068 aa		12.16	□□□□□ -0.46
CHD2-223	ENST00000636306	MAST3	O60307	1309 aa		12.16	□□□□□ -0.46
CHD2-223	ENST00000636306	DOCK2	Q92608	1830 aa		12.15	□□□□□ -0.46
CHD2-223	ENST00000636306	EIF3H	O15372	352 aa	Known RBP eCLIP	12.15	□□□□□ -0.46	4e-6	■■■□□ 17.5
CHD2-223	ENST00000636306	SLC5A1	P13866	664 aa		12.15	□□□□□ -0.46
CHD2-223	ENST00000636306	NCAPH	Q15003	741 aa		12.15	□□□□□ -0.46
CHD2-223	ENST00000636306	PUM3	Q15397	648 aa	Known RBP	12.15	□□□□□ -0.46
CHD2-223	ENST00000636306	CCDC152	Q4G0S7	254 aa		12.15	□□□□□ -0.46
CHD2-223	ENST00000636306	ZNF483	Q8TF39	744 aa	Predicted RBP	12.15	□□□□□ -0.46
CHD2-223	ENST00000636306	APPBP2	Q92624	585 aa		12.15	□□□□□ -0.46
CHD2-223	ENST00000636306	PAIP2	Q9BPZ3	127 aa	Known RBP	12.15	□□□□□ -0.46
CHD2-223	ENST00000636306	GOLPH3L	Q9H4A5	285 aa		12.15	□□□□□ -0.46
CHD2-223	ENST00000636306	THSD7A	Q9UPZ6	1657 aa		12.15	□□□□□ -0.46
CHD2-223	ENST00000636306		A0A1W2PQ27	194 aa		12.15	□□□□□ -0.46
CHD2-223	ENST00000636306		A0A1W2PQ64	194 aa		12.15	□□□□□ -0.46
CHD2-223	ENST00000636306		A0A1W2PQD8	194 aa		12.15	□□□□□ -0.46
CHD2-223	ENST00000636306	LRRIQ3	A6PVS8	624 aa	Predicted RBP	12.15	□□□□□ -0.46
CHD2-223	ENST00000636306	TOP1	P11387	765 aa	Known RBP	12.15	□□□□□ -0.46
CHD2-223	ENST00000636306	CPA1	P15085	419 aa		12.15	□□□□□ -0.46
CHD2-223	ENST00000636306	CLNS1A	P54105	237 aa	Known RBP	12.15	□□□□□ -0.46
CHD2-223	ENST00000636306	VSNL1	P62760	191 aa		12.15	□□□□□ -0.46
CHD2-223	ENST00000636306	FKBP4	Q02790	459 aa	Known RBP eCLIP	12.15	□□□□□ -0.46
CHD2-223	ENST00000636306	TTC19	Q6DKK2	380 aa	Predicted RBP	12.15	□□□□□ -0.46
CHD2-223	ENST00000636306	INTS5	Q6P9B9	1019 aa	Known RBP	12.15	□□□□□ -0.46
CHD2-223	ENST00000636306	KIAA1328	Q86T90	577 aa		12.15	□□□□□ -0.46
CHD2-223	ENST00000636306	IGSF22	Q8N9C0	903 aa		12.15	□□□□□ -0.46
CHD2-223	ENST00000636306	NUCKS1	Q9H1E3	243 aa	Known RBP	12.15	□□□□□ -0.46
CHD2-223	ENST00000636306	ATP6V0A4	Q9HBG4	840 aa		12.15	□□□□□ -0.46
CHD2-223	ENST00000636306	HOMER3	Q9NSC5	361 aa		12.15	□□□□□ -0.46
CHD2-223	ENST00000636306	KLC4	Q9NSK0	619 aa		12.15	□□□□□ -0.46
CHD2-223	ENST00000636306	KIAA1468	Q9P260	1216 aa		12.15	□□□□□ -0.46
CHD2-223	ENST00000636306	TBC1D2B	Q9UPU7	963 aa		12.15	□□□□□ -0.46
CHD2-223	ENST00000636306	UBN2	Q6ZU65	1347 aa		12.14	□□□□□ -0.47
CHD2-223	ENST00000636306	AKAP11	Q9UKA4	1901 aa		12.14	□□□□□ -0.47
CHD2-223	ENST00000636306	MYH15	Q9Y2K3	1946 aa		12.14	□□□□□ -0.47
CHD2-223	ENST00000636306	CTAGE15	A4D2H0	777 aa		12.14	□□□□□ -0.47
CHD2-223	ENST00000636306	MEFV	O15553	781 aa	Predicted RBP	12.14	□□□□□ -0.47
CHD2-223	ENST00000636306	PDE8B	O95263	885 aa		12.14	□□□□□ -0.47
CHD2-223	ENST00000636306	CTAGE8	P0CG41	777 aa		12.14	□□□□□ -0.47
CHD2-223	ENST00000636306	TBX2	Q13207	712 aa	Predicted RBP	12.14	□□□□□ -0.47
CHD2-223	ENST00000636306	RBBP5	Q15291	538 aa	Known RBP	12.14	□□□□□ -0.47
CHD2-223	ENST00000636306	NAA16	Q6N069	864 aa	Predicted RBP	12.14	□□□□□ -0.47
CHD2-223	ENST00000636306	TLDC1	Q6P9B6	456 aa		12.14	□□□□□ -0.47
CHD2-223	ENST00000636306	CLEC4G	Q6UXB4	293 aa		12.14	□□□□□ -0.47
CHD2-223	ENST00000636306	BRAP	Q7Z569	592 aa		12.14	□□□□□ -0.47
CHD2-223	ENST00000636306	CTAGE6	Q86UF2	777 aa		12.14	□□□□□ -0.47
CHD2-223	ENST00000636306	CTAGE4	Q8IX94	777 aa		12.14	□□□□□ -0.47
CHD2-223	ENST00000636306	MAB21L3	Q8N8X9	362 aa		12.14	□□□□□ -0.47
CHD2-223	ENST00000636306	FSIP1	Q8NA03	581 aa		12.14	□□□□□ -0.47
CHD2-223	ENST00000636306	CCDC26	Q8TAB7	109 aa		12.14	□□□□□ -0.47
CHD2-223	ENST00000636306	TCP11	Q8WWU5	503 aa		12.14	□□□□□ -0.47
CHD2-223	ENST00000636306	LPIN2	Q92539	896 aa		12.14	□□□□□ -0.47
CHD2-223	ENST00000636306	ACSBG1	Q96GR2	724 aa		12.14	□□□□□ -0.47
CHD2-223	ENST00000636306	LLPH	Q9BRT6	129 aa	Known RBP	12.14	□□□□□ -0.47
CHD2-223	ENST00000636306	SLC24A3	Q9HC58	644 aa		12.14	□□□□□ -0.47
CHD2-223	ENST00000636306	HPCAL4	Q9UM19	191 aa		12.14	□□□□□ -0.47
CHD2-223	ENST00000636306	SPATA31A6	Q5VVP1	1343 aa		12.14	□□□□□ -0.47
CHD2-223	ENST00000636306	PHACTR2	O75167	634 aa		12.13	□□□□□ -0.47
CHD2-223	ENST00000636306	CAMTA2	O94983	1202 aa		12.13	□□□□□ -0.47
CHD2-223	ENST00000636306	CYP21A2	P08686	494 aa		12.13	□□□□□ -0.47
CHD2-223	ENST00000636306	EZR	P15311	586 aa	Known RBP	12.13	□□□□□ -0.47
CHD2-223	ENST00000636306	ADD1	P35611	737 aa	Known RBP	12.13	□□□□□ -0.47
CHD2-223	ENST00000636306	IGHMBP2	P38935	993 aa	Known RBP	12.13	□□□□□ -0.47
CHD2-223	ENST00000636306	UBASH3A	P57075	661 aa		12.13	□□□□□ -0.47
CHD2-223	ENST00000636306	IMMT	Q16891	758 aa	Known RBP	12.13	□□□□□ -0.47
CHD2-223	ENST00000636306	WASHC4	Q2M389	1173 aa		12.13	□□□□□ -0.47
CHD2-223	ENST00000636306	ZC3H12A	Q5D1E8	599 aa	Known RBP	12.13	□□□□□ -0.47
CHD2-223	ENST00000636306	WWC2	Q6AWC2	1192 aa		12.13	□□□□□ -0.47
CHD2-223	ENST00000636306	CCDC129	Q6ZRS4	1044 aa		12.13	□□□□□ -0.47
CHD2-223	ENST00000636306	DHX32	Q7L7V1	743 aa	Known RBP	12.13	□□□□□ -0.47
CHD2-223	ENST00000636306	FMR1NB	Q8N0W7	255 aa	Predicted RBP	12.13	□□□□□ -0.47
CHD2-223	ENST00000636306	CAPS2	Q9BXY5	557 aa		12.13	□□□□□ -0.47
CHD2-223	ENST00000636306	KAT14	Q9H8E8	782 aa		12.13	□□□□□ -0.47
CHD2-223	ENST00000636306	CD248	Q9HCU0	757 aa		12.13	□□□□□ -0.47
CHD2-223	ENST00000636306	CNTNAP4	Q9C0A0	1308 aa		12.13	□□□□□ -0.47
CHD2-223	ENST00000636306	PES1	O00541	588 aa	Known RBP	12.13	□□□□□ -0.47
CHD2-223	ENST00000636306	KIF5C	O60282	957 aa		12.13	□□□□□ -0.47
CHD2-223	ENST00000636306	RASSF9	O75901	435 aa		12.13	□□□□□ -0.47
CHD2-223	ENST00000636306	HSPD1	P10809	573 aa	Known RBP	12.13	□□□□□ -0.47
CHD2-223	ENST00000636306	ARID4A	P29374	1257 aa	Predicted RBP	12.13	□□□□□ -0.47
CHD2-223	ENST00000636306	ADORA1	P30542	326 aa		12.13	□□□□□ -0.47
CHD2-223	ENST00000636306	PRPH	P41219	470 aa		12.13	□□□□□ -0.47

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