RNA–Protein interactions for RNA: ENST00000635893.1

SCN1A-211, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 168 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-211ENST00000635893 LCNL1Q6ZST4 164 aa6.21□□□□□ -1.42
SCN1A-211ENST00000635893 CREG2Q8IUH2 290 aa6.21□□□□□ -1.42
SCN1A-211ENST00000635893 MCATQ8IVS2 390 aaKnown RBP6.21□□□□□ -1.42
SCN1A-211ENST00000635893 DNAJB8Q8NHS0 232 aa6.21□□□□□ -1.42
SCN1A-211ENST00000635893 MYLIPQ8WY64 445 aa6.21□□□□□ -1.42
SCN1A-211ENST00000635893 TRIT1Q9H3H1 467 aaKnown RBP6.21□□□□□ -1.42
SCN1A-211ENST00000635893 DCP1AQ9NPI6 582 aaPredicted RBP6.21□□□□□ -1.42
SCN1A-211ENST00000635893 ADAM30Q9UKF2 790 aa6.21□□□□□ -1.42
SCN1A-211ENST00000635893 CEP131Q9UPN4 1083 aa6.21□□□□□ -1.42
SCN1A-211ENST00000635893 HPXP02790 462 aa6.2□□□□□ -1.42
SCN1A-211ENST00000635893 ZSCAN22P10073 491 aaPredicted RBP6.2□□□□□ -1.42
SCN1A-211ENST00000635893 RLBP1P12271 317 aa6.2□□□□□ -1.42
SCN1A-211ENST00000635893 TPP2P29144 1249 aaPredicted RBP6.2□□□□□ -1.42
SCN1A-211ENST00000635893 HK2P52789 917 aa6.2□□□□□ -1.42
SCN1A-211ENST00000635893 RPL6Q02878 288 aaKnown RBP6.2□□□□□ -1.42
SCN1A-211ENST00000635893 Q96M66 194 aa6.2□□□□□ -1.42
SCN1A-211ENST00000635893 DUSP15Q9H1R2 295 aaPredicted RBP6.2□□□□□ -1.42
SCN1A-211ENST00000635893 ADAMTS10Q9H324 1103 aa6.2□□□□□ -1.42
SCN1A-211ENST00000635893 RBAK-RBAKDNI3L0D1 243 aa6.19□□□□□ -1.42
SCN1A-211ENST00000635893 TFE3P19532 575 aaPredicted RBP6.19□□□□□ -1.42
SCN1A-211ENST00000635893 ERVFC1P60507 584 aa6.19□□□□□ -1.42
SCN1A-211ENST00000635893 GAB4Q2WGN9 574 aa6.19□□□□□ -1.42
SCN1A-211ENST00000635893 DIEXFQ68CQ4 756 aaKnown RBP6.19□□□□□ -1.42
SCN1A-211ENST00000635893 ACSF2Q96CM8 615 aaPredicted RBP6.19□□□□□ -1.42
SCN1A-211ENST00000635893 DUSP9Q99956 384 aaKnown RBP6.19□□□□□ -1.42
SCN1A-211ENST00000635893 GPATCH2Q9NW75 528 aa6.19□□□□□ -1.42
SCN1A-211ENST00000635893 WASH4PA8MWX3 477 aa6.18□□□□□ -1.42
SCN1A-211ENST00000635893 NPIPB6E9PJ23 425 aa6.18□□□□□ -1.42
SCN1A-211ENST00000635893 MED14OSP0DP75 135 aa6.18□□□□□ -1.42
SCN1A-211ENST00000635893 GPR62Q9BZJ7 368 aa6.18□□□□□ -1.42
SCN1A-211ENST00000635893 CD320Q9NPF0 282 aa6.18□□□□□ -1.42
SCN1A-211ENST00000635893 KCNH3Q9ULD8 1083 aa6.18□□□□□ -1.42
SCN1A-211ENST00000635893 PATL2C9JE40 543 aaKnown RBP6.17□□□□□ -1.42
SCN1A-211ENST00000635893 SRFP11831 508 aa6.17□□□□□ -1.42
SCN1A-211ENST00000635893 GLDCP23378 1020 aa6.17□□□□□ -1.42
SCN1A-211ENST00000635893 KCNA10Q16322 511 aa6.17□□□□□ -1.42
SCN1A-211ENST00000635893 EAPPQ56P03 285 aaPredicted RBP6.17□□□□□ -1.42
SCN1A-211ENST00000635893 MEI1Q5TIA1 1274 aa6.17□□□□□ -1.42
SCN1A-211ENST00000635893 ATG14Q6ZNE5 492 aa6.17□□□□□ -1.42
SCN1A-211ENST00000635893 CCDC84Q86UT8 332 aaPredicted RBP6.17□□□□□ -1.42
SCN1A-211ENST00000635893 AMIGO3Q86WK7 504 aa6.17□□□□□ -1.42
SCN1A-211ENST00000635893 PPP1R13LQ8WUF5 828 aa6.17□□□□□ -1.42
SCN1A-211ENST00000635893 CYB5D2Q8WUJ1 264 aa6.17□□□□□ -1.42
SCN1A-211ENST00000635893 JARID2Q92833 1246 aaPredicted RBP6.17□□□□□ -1.42
SCN1A-211ENST00000635893 SLC26A8Q96RN1 970 aa6.17□□□□□ -1.42
SCN1A-211ENST00000635893 NOC4LQ9BVI4 516 aaKnown RBP6.17□□□□□ -1.42
SCN1A-211ENST00000635893 KCNK12Q9HB15 430 aa6.17□□□□□ -1.42
SCN1A-211ENST00000635893 RNF19AQ9NV58 838 aa6.17□□□□□ -1.42
SCN1A-211ENST00000635893 DUSP13Q9UII6 198 aa6.17□□□□□ -1.42
SCN1A-211ENST00000635893 TCAF2A6NFQ2 919 aa6.16□□□□□ -1.42
SCN1A-211ENST00000635893 EGR3Q06889 387 aa6.16□□□□□ -1.42
SCN1A-211ENST00000635893 TSPYL5Q86VY4 417 aaPredicted RBP6.16□□□□□ -1.42
SCN1A-211ENST00000635893 DTWD2Q8NBA8 298 aa6.16□□□□□ -1.42
SCN1A-211ENST00000635893 PDZD8Q8NEN9 1154 aa6.16□□□□□ -1.42
SCN1A-211ENST00000635893 KCNN1Q92952 543 aa6.16□□□□□ -1.42
SCN1A-211ENST00000635893 TLR6Q9Y2C9 796 aa6.16□□□□□ -1.42
SCN1A-211ENST00000635893 KRTAP9-7A8MTY7 169 aa6.15□□□□□ -1.42
SCN1A-211ENST00000635893 ETV2O00321 342 aaPredicted RBP6.15□□□□□ -1.42
SCN1A-211ENST00000635893 PLCG1P19174 1290 aa6.15□□□□□ -1.42
SCN1A-211ENST00000635893 ST13P50502 369 aaKnown RBP6.15□□□□□ -1.42
SCN1A-211ENST00000635893 YARSP54577 528 aaKnown RBP6.15□□□□□ -1.42
SCN1A-211ENST00000635893 TAF1CQ15572 869 aaPredicted RBP6.15□□□□□ -1.42
SCN1A-211ENST00000635893 TMEM201Q5SNT2 666 aa6.15□□□□□ -1.42
SCN1A-211ENST00000635893 CIAPIN1Q6FI81 312 aa6.15□□□□□ -1.42
SCN1A-211ENST00000635893 LILRA6Q6PI73 481 aa6.15□□□□□ -1.42
SCN1A-211ENST00000635893 LILRA2Q8N149 483 aa6.15□□□□□ -1.42
SCN1A-211ENST00000635893 OXR1Q8N573 874 aa6.15□□□□□ -1.42
SCN1A-211ENST00000635893 PHC3Q8NDX5 983 aa6.15□□□□□ -1.42
SCN1A-211ENST00000635893 FAM13CQ8NE31 585 aa6.15□□□□□ -1.42
SCN1A-211ENST00000635893 RNF32Q9H0A6 362 aa6.15□□□□□ -1.42
SCN1A-211ENST00000635893 SP110Q9HB58 689 aa6.15□□□□□ -1.42
SCN1A-211ENST00000635893 CORINQ9Y5Q5 1042 aa6.15□□□□□ -1.42
SCN1A-211ENST00000635893 ZGLP1P0C6A0 271 aa6.14□□□□□ -1.43
SCN1A-211ENST00000635893 TRHRP34981 398 aaPredicted RBP6.14□□□□□ -1.43
SCN1A-211ENST00000635893 RNF141Q8WVD5 230 aa6.14□□□□□ -1.43
SCN1A-211ENST00000635893 DHX38Q92620 1227 aaKnown RBP6.14□□□□□ -1.43
SCN1A-211ENST00000635893 SYTL4Q96C24 671 aaPredicted RBP6.14□□□□□ -1.43
SCN1A-211ENST00000635893 RAPGEFL1Q9UHV5 662 aa6.14□□□□□ -1.43
SCN1A-211ENST00000635893 SMG5Q9UPR3 1016 aaKnown RBP6.14□□□□□ -1.43
SCN1A-211ENST00000635893 FITM1A5D6W6 292 aa6.13□□□□□ -1.43
SCN1A-211ENST00000635893 ANKRD33BA6NCL7 494 aa6.13□□□□□ -1.43
SCN1A-211ENST00000635893 UPK3BL1B0FP48 263 aa6.13□□□□□ -1.43
SCN1A-211ENST00000635893 UPK3BL2E5RIL1 263 aa6.13□□□□□ -1.43
SCN1A-211ENST00000635893 CILPO75339 1184 aa6.13□□□□□ -1.43
SCN1A-211ENST00000635893 BPNT1O95861 308 aa6.13□□□□□ -1.43
SCN1A-211ENST00000635893 LTKP29376 864 aa6.13□□□□□ -1.43
SCN1A-211ENST00000635893 NR0B2Q15466 257 aa6.13□□□□□ -1.43
SCN1A-211ENST00000635893 TTLL10Q6ZVT0 673 aa6.13□□□□□ -1.43
SCN1A-211ENST00000635893 IRF2BP1Q8IU81 584 aa6.13□□□□□ -1.43
SCN1A-211ENST00000635893 SLFN12Q8IYM2 578 aa6.13□□□□□ -1.43
SCN1A-211ENST00000635893 TRAIPQ9BWF2 469 aa6.13□□□□□ -1.43
SCN1A-211ENST00000635893 SLC6A17Q9H1V8 727 aa6.13□□□□□ -1.43
SCN1A-211ENST00000635893 C19orf44Q9H6X5 657 aa6.13□□□□□ -1.43
SCN1A-211ENST00000635893 PARP2Q9UGN5 583 aa6.13□□□□□ -1.43
SCN1A-211ENST00000635893 PCDHA11Q9Y5I1 949 aa6.13□□□□□ -1.43
SCN1A-211ENST00000635893 DAB2P98082 770 aa6.12□□□□□ -1.43
SCN1A-211ENST00000635893 LMNB2Q03252 620 aa6.12□□□□□ -1.43
SCN1A-211ENST00000635893 PSMD2Q13200 908 aa6.12□□□□□ -1.43
SCN1A-211ENST00000635893 BNC2Q6ZN30 1099 aaPredicted RBP6.12□□□□□ -1.43
SCN1A-211ENST00000635893 USP31Q70CQ4 1352 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms