RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 PRDM5Q9NQX1 630 aaPredicted RBP4.2□□□□□ -1.74
PSPC1-208ENST00000635562 CYP8B1Q9UNU6 501 aa4.2□□□□□ -1.74
PSPC1-208ENST00000635562 TLR6Q9Y2C9 796 aa4.2□□□□□ -1.74
PSPC1-208ENST00000635562 F6X3S4 739 aa4.19□□□□□ -1.74
PSPC1-208ENST00000635562 TRIM37O94972 964 aa4.19□□□□□ -1.74
PSPC1-208ENST00000635562 GLI1P08151 1106 aa4.19□□□□□ -1.74
PSPC1-208ENST00000635562 GBP2P32456 591 aaPredicted RBP4.19□□□□□ -1.74
PSPC1-208ENST00000635562 EIF4A3P38919 411 aaKnown RBP4.19□□□□□ -1.74
PSPC1-208ENST00000635562 CD96P40200 585 aa4.19□□□□□ -1.74
PSPC1-208ENST00000635562 PAK2Q13177 524 aa4.19□□□□□ -1.74
PSPC1-208ENST00000635562 CAMK2GQ13555 558 aaPredicted RBP4.19□□□□□ -1.74
PSPC1-208ENST00000635562 LRRC14Q15048 493 aa4.19□□□□□ -1.74
PSPC1-208ENST00000635562 MAP3K11Q16584 847 aa4.19□□□□□ -1.74
PSPC1-208ENST00000635562 MLANAQ16655 118 aa4.19□□□□□ -1.74
PSPC1-208ENST00000635562 EAF1Q96JC9 268 aaPredicted RBP4.19□□□□□ -1.74
PSPC1-208ENST00000635562 COX4I2Q96KJ9 171 aa4.19□□□□□ -1.74
PSPC1-208ENST00000635562 HEXIM2Q96MH2 286 aaKnown RBP4.19□□□□□ -1.74
PSPC1-208ENST00000635562 PSMD1Q99460 953 aa4.19□□□□□ -1.74
PSPC1-208ENST00000635562 NT5C1AQ9BXI3 368 aa4.19□□□□□ -1.74
PSPC1-208ENST00000635562 LRRC3Q9BY71 257 aa4.19□□□□□ -1.74
PSPC1-208ENST00000635562 CWC22Q9HCG8 908 aaKnown RBP4.19□□□□□ -1.74
PSPC1-208ENST00000635562 CTNND2Q9UQB3 1225 aa4.19□□□□□ -1.74
PSPC1-208ENST00000635562 PCDHB5Q9Y5E4 795 aa4.19□□□□□ -1.74
PSPC1-208ENST00000635562 U3KQE9 123 aa4.19□□□□□ -1.74
PSPC1-208ENST00000635562 PITPNM2Q9BZ72 1349 aa4.19□□□□□ -1.74
PSPC1-208ENST00000635562 FAM221AA4D161 298 aa4.18□□□□□ -1.74
PSPC1-208ENST00000635562 ZNF503-AS2A6NEH8 195 aa4.18□□□□□ -1.74
PSPC1-208ENST00000635562 MINDY4BA8MYZ0 360 aa4.18□□□□□ -1.74
PSPC1-208ENST00000635562 PPM1GO15355 546 aaPredicted RBP4.18□□□□□ -1.74
PSPC1-208ENST00000635562 LRIG2O94898 1065 aa4.18□□□□□ -1.74
PSPC1-208ENST00000635562 CANXP27824 592 aaKnown RBP4.18□□□□□ -1.74
PSPC1-208ENST00000635562 MPZL3Q6UWV2 235 aa4.18□□□□□ -1.74
PSPC1-208ENST00000635562 FAM214BQ7L5A3 538 aa4.18□□□□□ -1.74
PSPC1-208ENST00000635562 ANKLE2Q86XL3 938 aa4.18□□□□□ -1.74
PSPC1-208ENST00000635562 KIAA0825Q8IV33 1275 aa4.18□□□□□ -1.74
PSPC1-208ENST00000635562 GRIN3AQ8TCU5 1115 aa4.18□□□□□ -1.74
PSPC1-208ENST00000635562 GPBAR1Q8TDU6 330 aa4.18□□□□□ -1.74
PSPC1-208ENST00000635562 ZNF296Q8WUU4 475 aaPredicted RBP4.18□□□□□ -1.74
PSPC1-208ENST00000635562 SREK1Q8WXA9 508 aaKnown RBP4.18□□□□□ -1.74
PSPC1-208ENST00000635562 KIRREL1Q96J84 757 aa4.18□□□□□ -1.74
PSPC1-208ENST00000635562 SPON2Q9BUD6 331 aa4.18□□□□□ -1.74
PSPC1-208ENST00000635562 CBX8Q9HC52 389 aa4.18□□□□□ -1.74
PSPC1-208ENST00000635562 CAPN10Q9HC96 672 aa4.18□□□□□ -1.74
PSPC1-208ENST00000635562 RAPGEFL1Q9UHV5 662 aa4.18□□□□□ -1.74
PSPC1-208ENST00000635562 ROBO2Q9HCK4 1378 aa4.17□□□□□ -1.74
PSPC1-208ENST00000635562 F13A1P00488 732 aa4.17□□□□□ -1.74
PSPC1-208ENST00000635562 GDNFP39905 211 aa4.17□□□□□ -1.74
PSPC1-208ENST00000635562 PTPN11Q06124 597 aaPredicted RBP4.17□□□□□ -1.74
PSPC1-208ENST00000635562 RING1Q06587 406 aa4.17□□□□□ -1.74
PSPC1-208ENST00000635562 NKPD1Q17RQ9 610 aa4.17□□□□□ -1.74
PSPC1-208ENST00000635562 ZBTB37Q5TC79 503 aa4.17□□□□□ -1.74
PSPC1-208ENST00000635562 LLGL2Q6P1M3 1020 aa4.17□□□□□ -1.74
PSPC1-208ENST00000635562 MPRIPQ6WCQ1 1025 aa4.17□□□□□ -1.74
PSPC1-208ENST00000635562 FAM196AQ6ZSG2 479 aa4.17□□□□□ -1.74
PSPC1-208ENST00000635562 CYFIP1Q7L576 1253 aa4.17□□□□□ -1.74
PSPC1-208ENST00000635562 SLITRK4Q8IW52 837 aa4.17□□□□□ -1.74
PSPC1-208ENST00000635562 ZNF507Q8TCN5 953 aa4.17□□□□□ -1.74
PSPC1-208ENST00000635562 GATAD2BQ8WXI9 593 aa4.17□□□□□ -1.74
PSPC1-208ENST00000635562 GPRASP2Q96D09 838 aa4.17□□□□□ -1.74
PSPC1-208ENST00000635562 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.17□□□□□ -1.74
PSPC1-208ENST00000635562 INPP5FQ9Y2H2 1132 aa4.17□□□□□ -1.74
PSPC1-208ENST00000635562 SUPT16HQ9Y5B9 1047 aaKnown RBP4.17□□□□□ -1.74
PSPC1-208ENST00000635562 FAM155AB1AL88 458 aaPredicted RBP4.16□□□□□ -1.74
PSPC1-208ENST00000635562 NFIBO00712 420 aa4.16□□□□□ -1.74
PSPC1-208ENST00000635562 CILPO75339 1184 aa4.16□□□□□ -1.74
PSPC1-208ENST00000635562 FGRP09769 529 aa4.16□□□□□ -1.74
PSPC1-208ENST00000635562 ZNF865P0CJ78 1059 aaPredicted RBP4.16□□□□□ -1.74
PSPC1-208ENST00000635562 ATF4P18848 351 aaPredicted RBP4.16□□□□□ -1.74
PSPC1-208ENST00000635562 CAP2P40123 477 aa4.16□□□□□ -1.74
PSPC1-208ENST00000635562 CRKP46108 304 aa4.16□□□□□ -1.74
PSPC1-208ENST00000635562 SOX9P48436 509 aa4.16□□□□□ -1.74
PSPC1-208ENST00000635562 FAM160A1Q05DH4 1040 aa4.16□□□□□ -1.74
PSPC1-208ENST00000635562 SEPT6Q14141 434 aa4.16□□□□□ -1.74
PSPC1-208ENST00000635562 TMEM67Q5HYA8 995 aa4.16□□□□□ -1.74
PSPC1-208ENST00000635562 PPM1JQ5JR12 505 aa4.16□□□□□ -1.74
PSPC1-208ENST00000635562 BNC2Q6ZN30 1099 aaPredicted RBP4.16□□□□□ -1.74
PSPC1-208ENST00000635562 ARMCX6Q7L4S7 300 aa4.16□□□□□ -1.74
PSPC1-208ENST00000635562 THAP5Q7Z6K1 395 aa4.16□□□□□ -1.74
PSPC1-208ENST00000635562 LRRC56Q8IYG6 542 aaPredicted RBP4.16□□□□□ -1.74
PSPC1-208ENST00000635562 MFSD4AQ8N468 514 aa4.16□□□□□ -1.74
PSPC1-208ENST00000635562 MFSD2AQ8NA29 543 aa4.16□□□□□ -1.74
PSPC1-208ENST00000635562 GOLM1Q8NBJ4 401 aa4.16□□□□□ -1.74
PSPC1-208ENST00000635562 FBXO15Q8NCQ5 510 aaPredicted RBP4.16□□□□□ -1.74
PSPC1-208ENST00000635562 ELMO3Q96BJ8 720 aa4.16□□□□□ -1.74
PSPC1-208ENST00000635562 SPATA32Q96LK8 384 aa4.16□□□□□ -1.74
PSPC1-208ENST00000635562 ARID4BQ4LE39 1312 aaPredicted RBP4.16□□□□□ -1.74
PSPC1-208ENST00000635562 RAC2P15153 192 aa4.15□□□□□ -1.75
PSPC1-208ENST00000635562 CYP7A1P22680 504 aa4.15□□□□□ -1.75
PSPC1-208ENST00000635562 NTF4P34130 210 aa4.15□□□□□ -1.75
PSPC1-208ENST00000635562 MPP2Q14168 576 aa4.15□□□□□ -1.75
PSPC1-208ENST00000635562 SF3A1Q15459 793 aaKnown RBP4.15□□□□□ -1.75
PSPC1-208ENST00000635562 SNAP47Q5SQN1 464 aa4.15□□□□□ -1.75
PSPC1-208ENST00000635562 SFRP5Q5T4F7 317 aa4.15□□□□□ -1.75
PSPC1-208ENST00000635562 LCE4AQ5TA78 99 aa4.15□□□□□ -1.75
PSPC1-208ENST00000635562 SYDE1Q6ZW31 735 aaPredicted RBP4.15□□□□□ -1.75
PSPC1-208ENST00000635562 CILP2Q8IUL8 1156 aa4.15□□□□□ -1.75
PSPC1-208ENST00000635562 SEC16BQ96JE7 1060 aa4.15□□□□□ -1.75
PSPC1-208ENST00000635562 DRC1Q96MC2 740 aa4.15□□□□□ -1.75
PSPC1-208ENST00000635562 MIR1-1HGQ9H1L0 117 aa4.15□□□□□ -1.75
PSPC1-208ENST00000635562 UBP1Q9NZI7 540 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms