RNA–Protein interactions for RNA: ENST00000634178.1

TRAPPC9-216, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2

Gene TRAPPC9, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-216ENST00000634178 SLC26A8Q96RN1 970 aa7.1□□□□□ -1.27
TRAPPC9-216ENST00000634178 FEZ1Q99689 392 aa7.1□□□□□ -1.27
TRAPPC9-216ENST00000634178 CYP4F12Q9HCS2 524 aa7.1□□□□□ -1.27
TRAPPC9-216ENST00000634178 ZMYM5Q9UJ78 669 aa7.1□□□□□ -1.27
TRAPPC9-216ENST00000634178 NOP58Q9Y2X3 529 aaKnown RBP7.1□□□□□ -1.27
TRAPPC9-216ENST00000634178 PCDHGC5Q9Y5F6 944 aa7.1□□□□□ -1.27
TRAPPC9-216ENST00000634178 CSADQ9Y600 493 aa7.1□□□□□ -1.27
TRAPPC9-216ENST00000634178 SOGA1O94964 1423 aa7.1□□□□□ -1.27
TRAPPC9-216ENST00000634178 CCDC163A0A0D9SF12 145 aa7.09□□□□□ -1.27
TRAPPC9-216ENST00000634178 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.09□□□□□ -1.27
TRAPPC9-216ENST00000634178 NID1P14543 1247 aa7.09□□□□□ -1.27
TRAPPC9-216ENST00000634178 TCEA2Q15560 299 aa7.09□□□□□ -1.27
TRAPPC9-216ENST00000634178 ZBTB37Q5TC79 503 aa7.09□□□□□ -1.27
TRAPPC9-216ENST00000634178 NUTM2GQ5VZR2 741 aa7.09□□□□□ -1.27
TRAPPC9-216ENST00000634178 C1orf229Q6ZS94 237 aaPredicted RBP7.09□□□□□ -1.27
TRAPPC9-216ENST00000634178 ILDR2Q71H61 639 aa7.09□□□□□ -1.27
TRAPPC9-216ENST00000634178 KIAA0907Q7Z7F0 614 aaPredicted RBP7.09□□□□□ -1.27
TRAPPC9-216ENST00000634178 FBXO11Q86XK2 927 aa7.09□□□□□ -1.27
TRAPPC9-216ENST00000634178 RNF214Q8ND24 703 aa7.09□□□□□ -1.27
TRAPPC9-216ENST00000634178 TMEM87BQ96K49 555 aa7.09□□□□□ -1.27
TRAPPC9-216ENST00000634178 SLC9A7Q96T83 725 aa7.09□□□□□ -1.27
TRAPPC9-216ENST00000634178 RUSC1Q9BVN2 902 aa7.09□□□□□ -1.27
TRAPPC9-216ENST00000634178 ENAMQ9NRM1 1142 aa7.09□□□□□ -1.27
TRAPPC9-216ENST00000634178 CCDC88BA6NC98 1476 aa7.09□□□□□ -1.27
TRAPPC9-216ENST00000634178 TDRD9Q8NDG6 1382 aaKnown RBP7.08□□□□□ -1.28
TRAPPC9-216ENST00000634178 CHURC1-FNTBB4DL54 471 aa7.08□□□□□ -1.28
TRAPPC9-216ENST00000634178 TM4SF5O14894 197 aa7.08□□□□□ -1.28
TRAPPC9-216ENST00000634178 ADAM11O75078 769 aa7.08□□□□□ -1.28
TRAPPC9-216ENST00000634178 ACRP10323 421 aa7.08□□□□□ -1.28
TRAPPC9-216ENST00000634178 FOXD4L6Q3SYB3 417 aaPredicted RBP7.08□□□□□ -1.28
TRAPPC9-216ENST00000634178 GNPTABQ3T906 1256 aa7.08□□□□□ -1.28
TRAPPC9-216ENST00000634178 AKAP4Q5JQC9 854 aa7.08□□□□□ -1.28
TRAPPC9-216ENST00000634178 PPM1JQ5JR12 505 aa7.08□□□□□ -1.28
TRAPPC9-216ENST00000634178 KIAA1211LQ6NV74 962 aa7.08□□□□□ -1.28
TRAPPC9-216ENST00000634178 FOXD4L3Q6VB84 417 aaPredicted RBP7.08□□□□□ -1.28
TRAPPC9-216ENST00000634178 MRPL41Q8IXM3 137 aaKnown RBP7.08□□□□□ -1.28
TRAPPC9-216ENST00000634178 PHACTR4Q8IZ21 702 aa7.08□□□□□ -1.28
TRAPPC9-216ENST00000634178 SMARCC1Q92922 1105 aaPredicted RBP7.08□□□□□ -1.28
TRAPPC9-216ENST00000634178 ACSF2Q96CM8 615 aaPredicted RBP7.08□□□□□ -1.28
TRAPPC9-216ENST00000634178 SGSM3Q96HU1 749 aa7.08□□□□□ -1.28
TRAPPC9-216ENST00000634178 CCDC74BQ96LY2 380 aa7.08□□□□□ -1.28
TRAPPC9-216ENST00000634178 KRTAP9-2Q9BYQ4 174 aa7.08□□□□□ -1.28
TRAPPC9-216ENST00000634178 RNF208Q9H0X6 261 aa7.08□□□□□ -1.28
TRAPPC9-216ENST00000634178 IFT57Q9NWB7 429 aa7.08□□□□□ -1.28
TRAPPC9-216ENST00000634178 CRIM1Q9NZV1 1036 aa7.08□□□□□ -1.28
TRAPPC9-216ENST00000634178 PFDN2Q9UHV9 154 aa7.08□□□□□ -1.28
TRAPPC9-216ENST00000634178 ZNF214Q9UL59 606 aaPredicted RBP7.08□□□□□ -1.28
TRAPPC9-216ENST00000634178 LTBP3Q9NS15 1303 aa7.07□□□□□ -1.28
TRAPPC9-216ENST00000634178 RAD54L2Q9Y4B4 1467 aa7.07□□□□□ -1.28
TRAPPC9-216ENST00000634178 B2RBV5 119 aa7.07□□□□□ -1.28
TRAPPC9-216ENST00000634178 RGS13O14921 159 aa7.07□□□□□ -1.28
TRAPPC9-216ENST00000634178 TMPRSS2O15393 492 aa7.07□□□□□ -1.28
TRAPPC9-216ENST00000634178 DDX3YO15523 660 aaKnown RBP7.07□□□□□ -1.28
TRAPPC9-216ENST00000634178 SUSD5O60279 629 aa7.07□□□□□ -1.28
TRAPPC9-216ENST00000634178 SPATA9Q9BWV2 254 aa7.07□□□□□ -1.28
TRAPPC9-216ENST00000634178 TMPRSS13Q9BYE2 586 aa7.07□□□□□ -1.28
TRAPPC9-216ENST00000634178 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.07□□□□□ -1.28
TRAPPC9-216ENST00000634178 SUGCTQ9HAC7 445 aa7.07□□□□□ -1.28
TRAPPC9-216ENST00000634178 ERCC6L2Q5T890 1561 aa7.07□□□□□ -1.28
TRAPPC9-216ENST00000634178 UPK3BL1B0FP48 263 aa7.06□□□□□ -1.28
TRAPPC9-216ENST00000634178 SHISA8B8ZZ34 492 aa7.06□□□□□ -1.28
TRAPPC9-216ENST00000634178 UPK3BL2E5RIL1 263 aa7.06□□□□□ -1.28
TRAPPC9-216ENST00000634178 DLL1O00548 723 aa7.06□□□□□ -1.28
TRAPPC9-216ENST00000634178 DEAF1O75398 565 aaPredicted RBP7.06□□□□□ -1.28
TRAPPC9-216ENST00000634178 GBP1P32455 592 aa7.06□□□□□ -1.28
TRAPPC9-216ENST00000634178 CAP2P40123 477 aa7.06□□□□□ -1.28
TRAPPC9-216ENST00000634178 PMS1P54277 932 aaKnown RBP7.06□□□□□ -1.28
TRAPPC9-216ENST00000634178 GYS2P54840 703 aa7.06□□□□□ -1.28
TRAPPC9-216ENST00000634178 SQSTM1Q13501 440 aa7.06□□□□□ -1.28
TRAPPC9-216ENST00000634178 ZYXQ15942 572 aaKnown RBP7.06□□□□□ -1.28
TRAPPC9-216ENST00000634178 TMEM67Q5HYA8 995 aa7.06□□□□□ -1.28
TRAPPC9-216ENST00000634178 SPATC1Q76KD6 591 aa7.06□□□□□ -1.28
TRAPPC9-216ENST00000634178 Q8N3U1 123 aa7.06□□□□□ -1.28
TRAPPC9-216ENST00000634178 BEND7Q8N7W2 519 aaPredicted RBP7.06□□□□□ -1.28
TRAPPC9-216ENST00000634178 SMG8Q8ND04 991 aaKnown RBP7.06□□□□□ -1.28
TRAPPC9-216ENST00000634178 IPO9Q96P70 1041 aaKnown RBP7.06□□□□□ -1.28
TRAPPC9-216ENST00000634178 PIDD1Q9HB75 910 aa7.06□□□□□ -1.28
TRAPPC9-216ENST00000634178 TJP2Q9UDY2 1190 aa7.06□□□□□ -1.28
TRAPPC9-216ENST00000634178 PLAAQ9Y263 795 aa7.06□□□□□ -1.28
TRAPPC9-216ENST00000634178 LEMD3Q9Y2U8 911 aa7.06□□□□□ -1.28
TRAPPC9-216ENST00000634178 COL4A3BPQ9Y5P4 624 aa7.06□□□□□ -1.28
TRAPPC9-216ENST00000634178 PTCH2Q9Y6C5 1203 aa7.06□□□□□ -1.28
TRAPPC9-216ENST00000634178 SHROOM2Q13796 1616 aa7.05□□□□□ -1.28
TRAPPC9-216ENST00000634178 ABCC10Q5T3U5 1492 aa7.05□□□□□ -1.28
TRAPPC9-216ENST00000634178 DIAPH1O60610 1272 aaKnown RBP7.05□□□□□ -1.28
TRAPPC9-216ENST00000634178 DNAJA2O60884 412 aa7.05□□□□□ -1.28
TRAPPC9-216ENST00000634178 DLGAP3O95886 979 aa7.05□□□□□ -1.28
TRAPPC9-216ENST00000634178 DGKGP49619 791 aa7.05□□□□□ -1.28
TRAPPC9-216ENST00000634178 COL9A3Q14050 684 aaPredicted RBP7.05□□□□□ -1.28
TRAPPC9-216ENST00000634178 MRM1Q6IN84 353 aaKnown RBP7.05□□□□□ -1.28
TRAPPC9-216ENST00000634178 FMR1NBQ8N0W7 255 aaPredicted RBP7.05□□□□□ -1.28
TRAPPC9-216ENST00000634178 UBASH3BQ8TF42 649 aa7.05□□□□□ -1.28
TRAPPC9-216ENST00000634178 FANCD2OSQ96PS1 177 aa7.05□□□□□ -1.28
TRAPPC9-216ENST00000634178 APBA2Q99767 749 aa7.05□□□□□ -1.28
TRAPPC9-216ENST00000634178 MRPL18Q9H0U6 180 aaKnown RBP7.05□□□□□ -1.28
TRAPPC9-216ENST00000634178 KANSL2Q9H9L4 492 aa7.05□□□□□ -1.28
TRAPPC9-216ENST00000634178 RRAGCQ9HB90 399 aa7.05□□□□□ -1.28
TRAPPC9-216ENST00000634178 SSU72Q9NP77 194 aaKnown RBP7.05□□□□□ -1.28
TRAPPC9-216ENST00000634178 KCNK4Q9NYG8 393 aa7.05□□□□□ -1.28
TRAPPC9-216ENST00000634178 PPP1R9AQ9ULJ8 1098 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms