RNA–Protein interactions for RNA: ENST00000632897.1

LIMS4-204, Transcript of LIM zinc finger domain containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS4, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-204ENST00000632897 DBNDD1Q9H9R9 158 aa16.48■□□□□ 0.23
LIMS4-204ENST00000632897 GJB4Q9NTQ9 266 aa16.48■□□□□ 0.23
LIMS4-204ENST00000632897 ZNF646O15015 1829 aaPredicted RBP16.47■□□□□ 0.23
LIMS4-204ENST00000632897 F8W031 263 aaPredicted RBP16.47■□□□□ 0.23
LIMS4-204ENST00000632897 NMT2O60551 498 aa16.47■□□□□ 0.23
LIMS4-204ENST00000632897 LIG1P18858 919 aa16.47■□□□□ 0.23
LIMS4-204ENST00000632897 CDK8P49336 464 aa16.47■□□□□ 0.23
LIMS4-204ENST00000632897 CEBPZQ03701 1054 aaKnown RBP16.47■□□□□ 0.23
LIMS4-204ENST00000632897 LINC00301Q8NCQ3 95 aa16.47■□□□□ 0.23
LIMS4-204ENST00000632897 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.47■□□□□ 0.23
LIMS4-204ENST00000632897 RBSNQ9H1K0 784 aa16.47■□□□□ 0.23
LIMS4-204ENST00000632897 NUP62CLQ9H1M0 184 aa16.47■□□□□ 0.23
LIMS4-204ENST00000632897 FOXP1Q9H334 677 aaPredicted RBP16.47■□□□□ 0.23
LIMS4-204ENST00000632897 IL17RBQ9NRM6 502 aa16.47■□□□□ 0.23
LIMS4-204ENST00000632897 A0A1W2PQ27 194 aa16.46■□□□□ 0.23
LIMS4-204ENST00000632897 A0A1W2PQ64 194 aa16.46■□□□□ 0.23
LIMS4-204ENST00000632897 A0A1W2PQD8 194 aa16.46■□□□□ 0.23
LIMS4-204ENST00000632897 USP17L3A6NCW0 530 aa16.46■□□□□ 0.23
LIMS4-204ENST00000632897 USP17L4A6NCW7 530 aa16.46■□□□□ 0.23
LIMS4-204ENST00000632897 GUCY1A2P33402 732 aa16.46■□□□□ 0.23
LIMS4-204ENST00000632897 STK38Q15208 465 aa16.46■□□□□ 0.23
LIMS4-204ENST00000632897 SLC4A8Q2Y0W8 1093 aa16.46■□□□□ 0.23
LIMS4-204ENST00000632897 DACT2Q5SW24 774 aa16.46■□□□□ 0.23
LIMS4-204ENST00000632897 ANO1Q5XXA6 986 aa16.46■□□□□ 0.23
LIMS4-204ENST00000632897 USP17L1Q7RTZ2 530 aa16.46■□□□□ 0.23
LIMS4-204ENST00000632897 NEDD1Q8NHV4 660 aa16.46■□□□□ 0.23
LIMS4-204ENST00000632897 ZDHHC15Q96MV8 337 aa16.46■□□□□ 0.23
LIMS4-204ENST00000632897 FTOQ9C0B1 505 aaKnown RBP eCLIP16.46■□□□□ 0.23
LIMS4-204ENST00000632897 CLSTN2Q9H4D0 955 aa16.46■□□□□ 0.23
LIMS4-204ENST00000632897 PLIN4Q96Q06 1357 aa16.46■□□□□ 0.22
LIMS4-204ENST00000632897 WDHD1O75717 1129 aaPredicted RBP16.45■□□□□ 0.22
LIMS4-204ENST00000632897 CRKP46108 304 aa16.45■□□□□ 0.22
LIMS4-204ENST00000632897 GNAQP50148 359 aa16.45■□□□□ 0.22
LIMS4-204ENST00000632897 APLP1P51693 650 aa16.45■□□□□ 0.22
LIMS4-204ENST00000632897 TPRNQ4KMQ1 711 aa16.45■□□□□ 0.22
LIMS4-204ENST00000632897 CCDC93Q567U6 631 aa16.45■□□□□ 0.22
LIMS4-204ENST00000632897 RTKN2Q8IZC4 609 aa16.45■□□□□ 0.22
LIMS4-204ENST00000632897 ANP32BQ92688 251 aaKnown RBP16.45■□□□□ 0.22
LIMS4-204ENST00000632897 PANK2Q9BZ23 570 aa16.45■□□□□ 0.22
LIMS4-204ENST00000632897 USP40Q9NVE5 1235 aa16.45■□□□□ 0.22
LIMS4-204ENST00000632897 DACT1Q9NYF0 836 aa16.45■□□□□ 0.22
LIMS4-204ENST00000632897 TAOK2Q9UL54 1235 aa16.45■□□□□ 0.22
LIMS4-204ENST00000632897 MYO3BQ8WXR4 1341 aa16.44■□□□□ 0.22
LIMS4-204ENST00000632897 CNTNAP5Q8WYK1 1306 aa16.44■□□□□ 0.22
LIMS4-204ENST00000632897 MYH6P13533 1939 aa16.44■□□□□ 0.22
LIMS4-204ENST00000632897 PLEKHA8P1O95397 391 aa16.44■□□□□ 0.22
LIMS4-204ENST00000632897 LMNB1P20700 586 aa16.44■□□□□ 0.22
LIMS4-204ENST00000632897 ME1P48163 572 aa16.44■□□□□ 0.22
LIMS4-204ENST00000632897 GRM4Q14833 912 aa16.44■□□□□ 0.22
LIMS4-204ENST00000632897 SF3A1Q15459 793 aaKnown RBP16.44■□□□□ 0.22
LIMS4-204ENST00000632897 MAP3K11Q16584 847 aa16.44■□□□□ 0.22
LIMS4-204ENST00000632897 ADALQ6DHV7 355 aa16.44■□□□□ 0.22
LIMS4-204ENST00000632897 APOBEC3HQ6NTF7 200 aaKnown RBP16.44■□□□□ 0.22
LIMS4-204ENST00000632897 CCDC73Q6ZRK6 1079 aa16.44■□□□□ 0.22
LIMS4-204ENST00000632897 NOSTRINQ8IVI9 506 aa16.44■□□□□ 0.22
LIMS4-204ENST00000632897 SLC44A5Q8NCS7 719 aa16.44■□□□□ 0.22
LIMS4-204ENST00000632897 PNMA1Q8ND90 353 aa16.44■□□□□ 0.22
LIMS4-204ENST00000632897 MXD3Q9BW11 206 aa16.44■□□□□ 0.22
LIMS4-204ENST00000632897 ZNF219Q9P2Y4 722 aaPredicted RBP16.44■□□□□ 0.22
LIMS4-204ENST00000632897 CLIC4Q9Y696 253 aa16.44■□□□□ 0.22
LIMS4-204ENST00000632897 SPTLC2O15270 562 aa16.43■□□□□ 0.22
LIMS4-204ENST00000632897 SCNN1DP51172 638 aa16.43■□□□□ 0.22
LIMS4-204ENST00000632897 GABPAQ06546 454 aa16.43■□□□□ 0.22
LIMS4-204ENST00000632897 SLC39A14Q15043 492 aa16.43■□□□□ 0.22
LIMS4-204ENST00000632897 PKN1Q16512 942 aa16.43■□□□□ 0.22
LIMS4-204ENST00000632897 AOC3Q16853 763 aa16.43■□□□□ 0.22
LIMS4-204ENST00000632897 CDC42EP5Q6NZY7 148 aa16.43■□□□□ 0.22
LIMS4-204ENST00000632897 RBM43Q6ZSC3 357 aaKnown RBP16.43■□□□□ 0.22
LIMS4-204ENST00000632897 CCAR1Q8IX12 1150 aaKnown RBP16.43■□□□□ 0.22
LIMS4-204ENST00000632897 DIS3L2Q8IYB7 885 aaKnown RBP16.43■□□□□ 0.22
LIMS4-204ENST00000632897 CMTR1Q8N1G2 835 aaKnown RBP16.43■□□□□ 0.22
LIMS4-204ENST00000632897 CCDC82Q8N4S0 544 aa16.43■□□□□ 0.22
LIMS4-204ENST00000632897 JMYQ8N9B5 988 aa16.43■□□□□ 0.22
LIMS4-204ENST00000632897 RBM46Q8TBY0 533 aaKnown RBP16.43■□□□□ 0.22
LIMS4-204ENST00000632897 PSMD1Q99460 953 aa16.43■□□□□ 0.22
LIMS4-204ENST00000632897 FUCA2Q9BTY2 467 aa16.43■□□□□ 0.22
LIMS4-204ENST00000632897 VPS33BQ9H267 617 aa16.43■□□□□ 0.22
LIMS4-204ENST00000632897 TNMDQ9H2S6 317 aa16.43■□□□□ 0.22
LIMS4-204ENST00000632897 SWAP70Q9UH65 585 aa16.43■□□□□ 0.22
LIMS4-204ENST00000632897 PCDHA7Q9UN72 937 aa16.43■□□□□ 0.22
LIMS4-204ENST00000632897 UBE2Q2LH0YL09 131 aa16.42■□□□□ 0.22
LIMS4-204ENST00000632897 CTAGE5O15320 804 aa16.42■□□□□ 0.22
LIMS4-204ENST00000632897 PPP6R2O75170 966 aa16.42■□□□□ 0.22
LIMS4-204ENST00000632897 NPM3O75607 178 aaKnown RBP16.42■□□□□ 0.22
LIMS4-204ENST00000632897 NOVP48745 357 aa16.42■□□□□ 0.22
LIMS4-204ENST00000632897 SOGA3Q5TF21 947 aa16.42■□□□□ 0.22
LIMS4-204ENST00000632897 SRBD1Q8N5C6 995 aaKnown RBP16.42■□□□□ 0.22
LIMS4-204ENST00000632897 MRPS27Q92552 414 aaKnown RBP16.42■□□□□ 0.22
LIMS4-204ENST00000632897 LZTS2Q9BRK4 669 aa16.42■□□□□ 0.22
LIMS4-204ENST00000632897 OSBPL5Q9H0X9 879 aaPredicted RBP16.42■□□□□ 0.22
LIMS4-204ENST00000632897 SERPINA10Q9UK55 444 aa16.42■□□□□ 0.22
LIMS4-204ENST00000632897 V9GY48 417 aaPredicted RBP16.42■□□□□ 0.22
LIMS4-204ENST00000632897 SCN9AQ15858 1988 aa16.42■□□□□ 0.22
LIMS4-204ENST00000632897 ADAMTSL1Q8N6G6 1762 aa16.42■□□□□ 0.22
LIMS4-204ENST00000632897 PPIP5K2O43314 1243 aa16.42■□□□□ 0.22
LIMS4-204ENST00000632897 C21orf2O43822 256 aa16.42■□□□□ 0.22
LIMS4-204ENST00000632897 NR1I2O75469 434 aa16.42■□□□□ 0.22
LIMS4-204ENST00000632897 HLA-DOAP06340 250 aa16.42■□□□□ 0.22
LIMS4-204ENST00000632897 CCDC192P0DO97 292 aa16.42■□□□□ 0.22
LIMS4-204ENST00000632897 FAM160A1Q05DH4 1040 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms