RNA–Protein interactions for RNA: ENST00000631321.1

LINC00540-203, long intergenic non-protein coding RNA 540, humanhuman

TSL 2 BASIC

Gene LINC00540, Length 2,412 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00540-203ENST00000631321 MYH14Q7Z406 1995 aaKnown RBP14.57□□□□□ -0.08
LINC00540-203ENST00000631321 PDS5AQ29RF7 1337 aaKnown RBP14.57□□□□□ -0.08
LINC00540-203ENST00000631321 GOLGA6L9A6NEM1 432 aa14.57□□□□□ -0.08
LINC00540-203ENST00000631321 FAM205CA6NFA0 338 aa14.57□□□□□ -0.08
LINC00540-203ENST00000631321 SEMA3EO15041 775 aa14.57□□□□□ -0.08
LINC00540-203ENST00000631321 RGL2O15211 777 aa14.57□□□□□ -0.08
LINC00540-203ENST00000631321 GOLGA8FQ08AF8 430 aa14.57□□□□□ -0.08
LINC00540-203ENST00000631321 GOLGA8DPQ0D2H9 430 aa14.57□□□□□ -0.08
LINC00540-203ENST00000631321 NR1I3Q14994 352 aa14.57□□□□□ -0.08
LINC00540-203ENST00000631321 NPY5RQ15761 445 aa14.57□□□□□ -0.08
LINC00540-203ENST00000631321 EARS2Q5JPH6 523 aaKnown RBP14.57□□□□□ -0.08
LINC00540-203ENST00000631321 TMTC3Q6ZXV5 915 aa14.57□□□□□ -0.08
LINC00540-203ENST00000631321 ACSBG1Q96GR2 724 aa14.57□□□□□ -0.08
LINC00540-203ENST00000631321 BAG1Q99933 345 aaPredicted RBP14.57□□□□□ -0.08
LINC00540-203ENST00000631321 DNAI1Q9UI46 699 aa14.57□□□□□ -0.08
LINC00540-203ENST00000631321 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.57□□□□□ -0.08
LINC00540-203ENST00000631321 PPP2R2CQ9Y2T4 447 aa14.57□□□□□ -0.08
LINC00540-203ENST00000631321 A0A087X0B3 334 aa14.56□□□□□ -0.08
LINC00540-203ENST00000631321 A0A1B0GTH6 734 aa14.56□□□□□ -0.08
LINC00540-203ENST00000631321 VWA3AA6NCI4 1184 aa14.56□□□□□ -0.08
LINC00540-203ENST00000631321 PLEKHA8P1O95397 391 aa14.56□□□□□ -0.08
LINC00540-203ENST00000631321 DYNLL1P63167 89 aaKnown RBP14.56□□□□□ -0.08
LINC00540-203ENST00000631321 CAVIN4Q5BKX8 364 aa14.56□□□□□ -0.08
LINC00540-203ENST00000631321 C3orf67Q6ZVT6 689 aa14.56□□□□□ -0.08
LINC00540-203ENST00000631321 IQCA1Q86XH1 822 aa14.56□□□□□ -0.08
LINC00540-203ENST00000631321 PDILTQ8N807 584 aa14.56□□□□□ -0.08
LINC00540-203ENST00000631321 FAM84BQ96KN1 310 aaPredicted RBP14.56□□□□□ -0.08
LINC00540-203ENST00000631321 PKNOX2Q96KN3 472 aa14.56□□□□□ -0.08
LINC00540-203ENST00000631321 MINPP1Q9UNW1 487 aa14.56□□□□□ -0.08
LINC00540-203ENST00000631321 FANCGO15287 622 aa14.56□□□□□ -0.08
LINC00540-203ENST00000631321 ORC4O43929 436 aa14.56□□□□□ -0.08
LINC00540-203ENST00000631321 ATP2B1P20020 1258 aa14.56□□□□□ -0.08
LINC00540-203ENST00000631321 CDK11BP21127 795 aaKnown RBP14.56□□□□□ -0.08
LINC00540-203ENST00000631321 CUL4BQ13620 913 aa14.56□□□□□ -0.08
LINC00540-203ENST00000631321 ERFEQ4G0M1 354 aa14.56□□□□□ -0.08
LINC00540-203ENST00000631321 CTR9Q6PD62 1173 aa14.56□□□□□ -0.08
LINC00540-203ENST00000631321 APTXQ7Z2E3 356 aaKnown RBP14.56□□□□□ -0.08
LINC00540-203ENST00000631321 FBXO33Q7Z6M2 555 aa14.56□□□□□ -0.08
LINC00540-203ENST00000631321 TRMT44Q8IYL2 757 aaKnown RBP14.56□□□□□ -0.08
LINC00540-203ENST00000631321 LRRN4CLQ8ND94 238 aa14.56□□□□□ -0.08
LINC00540-203ENST00000631321 SMARCC1Q92922 1105 aaPredicted RBP14.56□□□□□ -0.08
LINC00540-203ENST00000631321 PAGE5Q96GU1 130 aa14.56□□□□□ -0.08
LINC00540-203ENST00000631321 V9GY48 417 aaPredicted RBP14.56□□□□□ -0.08
LINC00540-203ENST00000631321 SPATA1Q5VX52 437 aa14.55□□□□□ -0.08
LINC00540-203ENST00000631321 EPSTI1Q96J88 318 aa14.55□□□□□ -0.08
LINC00540-203ENST00000631321 BRMS1Q9HCU9 246 aa14.55□□□□□ -0.08
LINC00540-203ENST00000631321 SAMSN1Q9NSI8 373 aaKnown RBP14.55□□□□□ -0.08
LINC00540-203ENST00000631321 A0A1B0GUL6 1792 aa14.55□□□□□ -0.08
LINC00540-203ENST00000631321 CYP2D7A0A087X1C5 515 aa14.55□□□□□ -0.08
LINC00540-203ENST00000631321 GABPB1Q06547 395 aaPredicted RBP14.55□□□□□ -0.08
LINC00540-203ENST00000631321 DPYDQ12882 1025 aa14.55□□□□□ -0.08
LINC00540-203ENST00000631321 PTPN21Q16825 1174 aa14.55□□□□□ -0.08
LINC00540-203ENST00000631321 ERCC6LQ2NKX8 1250 aa14.55□□□□□ -0.08
LINC00540-203ENST00000631321 SLC10A5Q5PT55 438 aa14.55□□□□□ -0.08
LINC00540-203ENST00000631321 DHX58Q96C10 678 aa14.55□□□□□ -0.08
LINC00540-203ENST00000631321 GSDMAQ96QA5 445 aa14.55□□□□□ -0.08
LINC00540-203ENST00000631321 PARP3Q9Y6F1 533 aa14.55□□□□□ -0.08
LINC00540-203ENST00000631321 SCN7AQ01118 1682 aa14.55□□□□□ -0.08
LINC00540-203ENST00000631321 CNTNAP5Q8WYK1 1306 aa14.55□□□□□ -0.08
LINC00540-203ENST00000631321 DLEC1Q9Y238 1755 aa14.54□□□□□ -0.08
LINC00540-203ENST00000631321 WTIPA6NIX2 430 aaPredicted RBP14.54□□□□□ -0.08
LINC00540-203ENST00000631321 ZBTB22O15209 634 aa14.54□□□□□ -0.08
LINC00540-203ENST00000631321 PRDM1O75626 825 aa14.54□□□□□ -0.08
LINC00540-203ENST00000631321 TMED8Q6PL24 325 aaPredicted RBP14.54□□□□□ -0.08
LINC00540-203ENST00000631321 KRT222Q8N1A0 295 aa14.54□□□□□ -0.08
LINC00540-203ENST00000631321 SYMPKQ92797 1274 aaKnown RBP14.54□□□□□ -0.08
LINC00540-203ENST00000631321 BCL11BQ9C0K0 894 aaPredicted RBP14.54□□□□□ -0.08
LINC00540-203ENST00000631321 WNT7AO00755 349 aa14.54□□□□□ -0.08
LINC00540-203ENST00000631321 TRAPPC10P48553 1259 aa14.54□□□□□ -0.08
LINC00540-203ENST00000631321 ATP2C1P98194 919 aaPredicted RBP14.54□□□□□ -0.08
LINC00540-203ENST00000631321 HSP90AA4PQ58FG1 418 aa14.54□□□□□ -0.08
LINC00540-203ENST00000631321 CDKAL1Q5VV42 579 aa14.54□□□□□ -0.08
LINC00540-203ENST00000631321 NSUN4Q96CB9 384 aaKnown RBP14.54□□□□□ -0.08
LINC00540-203ENST00000631321 PANX2Q96RD6 677 aa14.54□□□□□ -0.08
LINC00540-203ENST00000631321 ZNF446Q9NWS9 450 aa14.54□□□□□ -0.08
LINC00540-203ENST00000631321 NRAPQ86VF7 1730 aa14.53□□□□□ -0.08
LINC00540-203ENST00000631321 PBX1P40424 430 aa14.53□□□□□ -0.08
LINC00540-203ENST00000631321 TTC38Q5R3I4 469 aa14.53□□□□□ -0.08
LINC00540-203ENST00000631321 USP17L12C9JPN9 530 aa14.53□□□□□ -0.08
LINC00540-203ENST00000631321 USP17L21D6R901 530 aa14.53□□□□□ -0.08
LINC00540-203ENST00000631321 TADA3O75528 432 aa14.53□□□□□ -0.08
LINC00540-203ENST00000631321 CD44P16070 742 aaKnown RBP14.53□□□□□ -0.08
LINC00540-203ENST00000631321 SRBD1Q8N5C6 995 aaKnown RBP14.53□□□□□ -0.08
LINC00540-203ENST00000631321 hCG_1642624A0A1W2PR95 340 aa14.52□□□□□ -0.08
LINC00540-203ENST00000631321 PPP1R3GB7ZBB8 358 aa14.52□□□□□ -0.08
LINC00540-203ENST00000631321 ADKP55263 362 aaKnown RBP14.52□□□□□ -0.08
LINC00540-203ENST00000631321 SBK1Q52WX2 424 aa14.52□□□□□ -0.08
LINC00540-203ENST00000631321 TOGARAM2Q6ZUX3 1019 aa14.52□□□□□ -0.08
LINC00540-203ENST00000631321 ADD3Q9UEY8 706 aaKnown RBP14.52□□□□□ -0.08
LINC00540-203ENST00000631321 SPATA31A5Q5VU36 1347 aa14.52□□□□□ -0.08
LINC00540-203ENST00000631321 SPATA31A7Q8IWB4 1347 aa14.52□□□□□ -0.08
LINC00540-203ENST00000631321 SYNRGQ9UMZ2 1314 aa14.52□□□□□ -0.08
LINC00540-203ENST00000631321 ROBO1Q9Y6N7 1651 aa14.52□□□□□ -0.09
LINC00540-203ENST00000631321 COL5A3P25940 1745 aaPredicted RBP14.52□□□□□ -0.09
LINC00540-203ENST00000631321 MYH6P13533 1939 aa14.52□□□□□ -0.09
LINC00540-203ENST00000631321 A0A0G2JS52 829 aa14.52□□□□□ -0.09
LINC00540-203ENST00000631321 KDM4FA0A1W2PPD8 638 aa14.52□□□□□ -0.09
LINC00540-203ENST00000631321 EFCAB8A8MWE9 144 aa14.52□□□□□ -0.09
LINC00540-203ENST00000631321 AKR1B15C9JRZ8 316 aaPredicted RBP14.52□□□□□ -0.09
LINC00540-203ENST00000631321 MECOMQ03112 1051 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms