RNA–Protein interactions for RNA: ENST00000631210.1

MECP2-220, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best)

Gene MECP2, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-220ENST00000631210 TOB2Q14106 344 aaPredicted RBP9.83□□□□□ -0.84
MECP2-220ENST00000631210 TMEM179Q6ZVK1 233 aa9.83□□□□□ -0.84
MECP2-220ENST00000631210 RUFY3Q7L099 469 aa9.83□□□□□ -0.84
MECP2-220ENST00000631210 ARMC9Q7Z3E5 817 aa9.83□□□□□ -0.84
MECP2-220ENST00000631210 ENAHQ8N8S7 591 aaPredicted RBP9.83□□□□□ -0.84
MECP2-220ENST00000631210 MKL1Q969V6 931 aa9.83□□□□□ -0.84
MECP2-220ENST00000631210 ZSCAN10Q96SZ4 725 aaPredicted RBP9.83□□□□□ -0.84
MECP2-220ENST00000631210 WDR18Q9BV38 432 aa9.83□□□□□ -0.84
MECP2-220ENST00000631210 LRRC2Q9BYS8 371 aa9.83□□□□□ -0.84
MECP2-220ENST00000631210 ALDH8A1Q9H2A2 487 aaPredicted RBP9.83□□□□□ -0.84
MECP2-220ENST00000631210 LY9Q9HBG7 655 aa9.83□□□□□ -0.84
MECP2-220ENST00000631210 ZNF287Q9HBT7 754 aa9.83□□□□□ -0.84
MECP2-220ENST00000631210 GINM1Q9NU53 330 aa9.83□□□□□ -0.84
MECP2-220ENST00000631210 AFG3L2Q9Y4W6 797 aa9.83□□□□□ -0.84
MECP2-220ENST00000631210 MYH4Q9Y623 1939 aa9.83□□□□□ -0.84
MECP2-220ENST00000631210 TNKSO95271 1327 aa9.82□□□□□ -0.84
MECP2-220ENST00000631210 TSPY2A6NKD2 308 aa9.82□□□□□ -0.84
MECP2-220ENST00000631210 EEF2P13639 858 aaKnown RBP9.82□□□□□ -0.84
MECP2-220ENST00000631210 MCM5P33992 734 aa9.82□□□□□ -0.84
MECP2-220ENST00000631210 ECE1P42892 770 aa9.82□□□□□ -0.84
MECP2-220ENST00000631210 EVCP57679 992 aa9.82□□□□□ -0.84
MECP2-220ENST00000631210 DGKZQ13574 1117 aa9.82□□□□□ -0.84
MECP2-220ENST00000631210 BLOC1S2Q6QNY1 142 aa9.82□□□□□ -0.84
MECP2-220ENST00000631210 RASGRP2Q7LDG7 609 aa9.82□□□□□ -0.84
MECP2-220ENST00000631210 RALYLQ86SE5 291 aaKnown RBP9.82□□□□□ -0.84
MECP2-220ENST00000631210 C2orf69Q8N8R5 385 aa9.82□□□□□ -0.84
MECP2-220ENST00000631210 MTA3Q9BTC8 594 aa9.82□□□□□ -0.84
MECP2-220ENST00000631210 TRIM34Q9BYJ4 488 aa9.82□□□□□ -0.84
MECP2-220ENST00000631210 ELP3Q9H9T3 547 aa9.82□□□□□ -0.84
MECP2-220ENST00000631210 TOMM22Q9NS69 142 aa9.82□□□□□ -0.84
MECP2-220ENST00000631210 NYAP2Q9P242 653 aa9.82□□□□□ -0.84
MECP2-220ENST00000631210 BRPF3Q9ULD4 1205 aa9.82□□□□□ -0.84
MECP2-220ENST00000631210 TMEM88BA6NKF7 163 aa9.81□□□□□ -0.84
MECP2-220ENST00000631210 USP17L5A8MUK1 530 aa9.81□□□□□ -0.84
MECP2-220ENST00000631210 FAM155AB1AL88 458 aaPredicted RBP9.81□□□□□ -0.84
MECP2-220ENST00000631210 MPHOSPH10O00566 681 aaKnown RBP9.81□□□□□ -0.84
MECP2-220ENST00000631210 HMGB1P09429 215 aaKnown RBP9.81□□□□□ -0.84
MECP2-220ENST00000631210 PSMA5P28066 241 aa9.81□□□□□ -0.84
MECP2-220ENST00000631210 APLP1P51693 650 aa9.81□□□□□ -0.84
MECP2-220ENST00000631210 HUNKP57058 714 aa9.81□□□□□ -0.84
MECP2-220ENST00000631210 ICA1Q05084 483 aa9.81□□□□□ -0.84
MECP2-220ENST00000631210 TRDNQ13061 729 aa9.81□□□□□ -0.84
MECP2-220ENST00000631210 TTLL12Q14166 644 aaPredicted RBP9.81□□□□□ -0.84
MECP2-220ENST00000631210 Q6ZUG5 572 aa9.81□□□□□ -0.84
MECP2-220ENST00000631210 SGMS1Q86VZ5 419 aa9.81□□□□□ -0.84
MECP2-220ENST00000631210 DGKHQ86XP1 1220 aa9.81□□□□□ -0.84
MECP2-220ENST00000631210 ERO1BQ86YB8 467 aa9.81□□□□□ -0.84
MECP2-220ENST00000631210 MS4A4AQ96JQ5 239 aa9.81□□□□□ -0.84
MECP2-220ENST00000631210 TMEM87BQ96K49 555 aa9.81□□□□□ -0.84
MECP2-220ENST00000631210 TMEM47Q9BQJ4 181 aa9.81□□□□□ -0.84
MECP2-220ENST00000631210 KANSL2Q9H9L4 492 aa9.81□□□□□ -0.84
MECP2-220ENST00000631210 CABP5Q9NP86 173 aa9.81□□□□□ -0.84
MECP2-220ENST00000631210 KCNH4Q9UQ05 1017 aa9.81□□□□□ -0.84
MECP2-220ENST00000631210 TMX2Q9Y320 296 aa9.81□□□□□ -0.84
MECP2-220ENST00000631210 ZHX2Q9Y6X8 837 aa9.81□□□□□ -0.84
MECP2-220ENST00000631210 LOC285556D6RIA3 1793 aa9.8□□□□□ -0.84
MECP2-220ENST00000631210 RLFQ13129 1914 aa9.8□□□□□ -0.84
MECP2-220ENST00000631210 RASSF10A6NK89 507 aa9.8□□□□□ -0.84
MECP2-220ENST00000631210 IFIT3O14879 490 aaKnown RBP9.8□□□□□ -0.84
MECP2-220ENST00000631210 IRF6O14896 467 aa9.8□□□□□ -0.84
MECP2-220ENST00000631210 SNHG28P0DPA3 235 aa9.8□□□□□ -0.84
MECP2-220ENST00000631210 LIFRP42702 1097 aa9.8□□□□□ -0.84
MECP2-220ENST00000631210 NEK4P51957 841 aa9.8□□□□□ -0.84
MECP2-220ENST00000631210 AK2P54819 239 aa9.8□□□□□ -0.84
MECP2-220ENST00000631210 HTRA3P83110 453 aa9.8□□□□□ -0.84
MECP2-220ENST00000631210 PPATQ06203 517 aa9.8□□□□□ -0.84
MECP2-220ENST00000631210 ST3GAL1Q11201 340 aa9.8□□□□□ -0.84
MECP2-220ENST00000631210 SPP2Q13103 211 aa9.8□□□□□ -0.84
MECP2-220ENST00000631210 PPIL2Q13356 520 aa9.8□□□□□ -0.84
MECP2-220ENST00000631210 RAB3GAP1Q15042 981 aa9.8□□□□□ -0.84
MECP2-220ENST00000631210 RABEP1Q15276 862 aa9.8□□□□□ -0.84
MECP2-220ENST00000631210 SLC35G1Q2M3R5 365 aa9.8□□□□□ -0.84
MECP2-220ENST00000631210 TMEM67Q5HYA8 995 aa9.8□□□□□ -0.84
MECP2-220ENST00000631210 SH3D19Q5HYK7 790 aa9.8□□□□□ -0.84
MECP2-220ENST00000631210 SPRYD7Q5W111 196 aa9.8□□□□□ -0.84
MECP2-220ENST00000631210 RASAL3Q86YV0 1011 aa9.8□□□□□ -0.84
MECP2-220ENST00000631210 WNK4Q96J92 1243 aa9.8□□□□□ -0.84
MECP2-220ENST00000631210 HHIPL1Q96JK4 782 aa9.8□□□□□ -0.84
MECP2-220ENST00000631210 ZIC5Q96T25 663 aa9.8□□□□□ -0.84
MECP2-220ENST00000631210 LARP6Q9BRS8 491 aaKnown RBP9.8□□□□□ -0.84
MECP2-220ENST00000631210 KIAA1683Q9H0B3 1180 aa9.8□□□□□ -0.84
MECP2-220ENST00000631210 UPF2Q9HAU5 1272 aaKnown RBP9.8□□□□□ -0.84
MECP2-220ENST00000631210 EMILIN3Q9NT22 766 aa9.8□□□□□ -0.84
MECP2-220ENST00000631210 CLIP2Q9UDT6 1046 aa9.8□□□□□ -0.84
MECP2-220ENST00000631210 HPS5Q9UPZ3 1129 aa9.8□□□□□ -0.84
MECP2-220ENST00000631210 CYP46A1Q9Y6A2 500 aa9.8□□□□□ -0.84
MECP2-220ENST00000631210 LARGE1O95461 756 aa9.79□□□□□ -0.84
MECP2-220ENST00000631210 TTLL1O95922 423 aa9.79□□□□□ -0.84
MECP2-220ENST00000631210 SLC10A3P09131 477 aa9.79□□□□□ -0.84
MECP2-220ENST00000631210 TOP1P11387 765 aaKnown RBP9.79□□□□□ -0.84
MECP2-220ENST00000631210 TROAPQ12815 778 aa9.79□□□□□ -0.84
MECP2-220ENST00000631210 RGMBQ6NW40 437 aa9.79□□□□□ -0.84
MECP2-220ENST00000631210 IQCA1Q86XH1 822 aa9.79□□□□□ -0.84
MECP2-220ENST00000631210 LRRC47Q8N1G4 583 aaKnown RBP9.79□□□□□ -0.84
MECP2-220ENST00000631210 ZNF280CQ8ND82 737 aa9.79□□□□□ -0.84
MECP2-220ENST00000631210 BRF1Q92994 677 aa9.79□□□□□ -0.84
MECP2-220ENST00000631210 OPTNQ96CV9 577 aa9.79□□□□□ -0.84
MECP2-220ENST00000631210 SLC10A4Q96EP9 437 aa9.79□□□□□ -0.84
MECP2-220ENST00000631210 OTUD5Q96G74 571 aa9.79□□□□□ -0.84
MECP2-220ENST00000631210 C12orf42Q96LP6 360 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms