RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 SATB1Q01826 763 aa5.68□□□□□ -1.5
SDCBP-213ENST00000630925 SEPT6Q14141 434 aa5.68□□□□□ -1.5
SDCBP-213ENST00000630925 SMC1AQ14683 1233 aaKnown RBP5.68□□□□□ -1.5
SDCBP-213ENST00000630925 GPATCH4Q5T3I0 446 aaKnown RBP5.68□□□□□ -1.5
SDCBP-213ENST00000630925 SRLQ86TD4 932 aa5.68□□□□□ -1.5
SDCBP-213ENST00000630925 IQCF2Q8IXL9 164 aa5.68□□□□□ -1.5
SDCBP-213ENST00000630925 C7orf61Q8IZ16 206 aa5.68□□□□□ -1.5
SDCBP-213ENST00000630925 NUP133Q8WUM0 1156 aa5.68□□□□□ -1.5
SDCBP-213ENST00000630925 CPLX3Q8WVH0 158 aa5.68□□□□□ -1.5
SDCBP-213ENST00000630925 FAM210AQ96ND0 272 aa5.68□□□□□ -1.5
SDCBP-213ENST00000630925 VPS33BQ9H267 617 aa5.68□□□□□ -1.5
SDCBP-213ENST00000630925 NCOA5Q9HCD5 579 aaKnown RBP5.68□□□□□ -1.5
SDCBP-213ENST00000630925 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.68□□□□□ -1.5
SDCBP-213ENST00000630925 SMC4Q9NTJ3 1288 aa5.68□□□□□ -1.5
SDCBP-213ENST00000630925 MKL2Q9ULH7 1088 aa5.68□□□□□ -1.5
SDCBP-213ENST00000630925 GPR52Q9Y2T5 361 aa5.68□□□□□ -1.5
SDCBP-213ENST00000630925 CCDC88BA6NC98 1476 aa5.68□□□□□ -1.5
SDCBP-213ENST00000630925 ITIH6Q6UXX5 1313 aa5.68□□□□□ -1.5
SDCBP-213ENST00000630925 RUSC2Q8N2Y8 1516 aa5.68□□□□□ -1.5
SDCBP-213ENST00000630925 POTEB3A0JP26 581 aa5.68□□□□□ -1.5
SDCBP-213ENST00000630925 FAM155AB1AL88 458 aaPredicted RBP5.68□□□□□ -1.5
SDCBP-213ENST00000630925 C6orf229H3BNL8 230 aa5.68□□□□□ -1.5
SDCBP-213ENST00000630925 EIF1AYO14602 144 aaKnown RBP5.68□□□□□ -1.5
SDCBP-213ENST00000630925 FOXO3O43524 673 aa5.68□□□□□ -1.5
SDCBP-213ENST00000630925 KIF5CO60282 957 aa5.68□□□□□ -1.5
SDCBP-213ENST00000630925 MICAL2O94851 1124 aa5.68□□□□□ -1.5
SDCBP-213ENST00000630925 UBASH3AP57075 661 aa5.68□□□□□ -1.5
SDCBP-213ENST00000630925 MPP1Q00013 466 aa5.68□□□□□ -1.5
SDCBP-213ENST00000630925 RILPL1Q5EBL4 403 aa5.68□□□□□ -1.5
SDCBP-213ENST00000630925 INTS11Q5TA45 600 aaKnown RBP5.68□□□□□ -1.5
SDCBP-213ENST00000630925 TYW1BQ6NUM6 668 aa5.68□□□□□ -1.5
SDCBP-213ENST00000630925 POTEBQ6S5H4 581 aa5.68□□□□□ -1.5
SDCBP-213ENST00000630925 ZBTB10Q96DT7 871 aa5.68□□□□□ -1.5
SDCBP-213ENST00000630925 TARS2Q9BW92 718 aaKnown RBP5.68□□□□□ -1.5
SDCBP-213ENST00000630925 MRPL9Q9BYD2 267 aaKnown RBP5.68□□□□□ -1.5
SDCBP-213ENST00000630925 OSGEPQ9NPF4 335 aa5.68□□□□□ -1.5
SDCBP-213ENST00000630925 ATP8A2Q9NTI2 1148 aa5.68□□□□□ -1.5
SDCBP-213ENST00000630925 TBC1D22BQ9NU19 505 aa5.68□□□□□ -1.5
SDCBP-213ENST00000630925 FNIP2Q9P278 1114 aa5.68□□□□□ -1.5
SDCBP-213ENST00000630925 ZNF112Q9UJU3 913 aa5.68□□□□□ -1.5
SDCBP-213ENST00000630925 PPP1R9AQ9ULJ8 1098 aa5.68□□□□□ -1.5
SDCBP-213ENST00000630925 RRP15Q9Y3B9 282 aaKnown RBP5.68□□□□□ -1.5
SDCBP-213ENST00000630925 SRCAPQ6ZRS2 3230 aa5.67□□□□□ -1.5
SDCBP-213ENST00000630925 TRIM64A6NGJ6 449 aa5.67□□□□□ -1.5
SDCBP-213ENST00000630925 TRIM64BA6NI03 449 aa5.67□□□□□ -1.5
SDCBP-213ENST00000630925 BOLA2-SMG1P6H3BVE0 249 aa5.67□□□□□ -1.5
SDCBP-213ENST00000630925 KIF1CO43896 1103 aaKnown RBP5.67□□□□□ -1.5
SDCBP-213ENST00000630925 MAPK9P45984 424 aa5.67□□□□□ -1.5
SDCBP-213ENST00000630925 UBXN2AP68543 259 aa5.67□□□□□ -1.5
SDCBP-213ENST00000630925 TMED1Q13445 227 aa5.67□□□□□ -1.5
SDCBP-213ENST00000630925 PPP2R5EQ16537 467 aa5.67□□□□□ -1.5
SDCBP-213ENST00000630925 MFSD4BQ5TF39 518 aa5.67□□□□□ -1.5
SDCBP-213ENST00000630925 SPATA1Q5VX52 437 aa5.67□□□□□ -1.5
SDCBP-213ENST00000630925 C16orf46Q6P387 395 aa5.67□□□□□ -1.5
SDCBP-213ENST00000630925 CCBE1Q6UXH8 406 aaPredicted RBP5.67□□□□□ -1.5
SDCBP-213ENST00000630925 BRINP3Q76B58 766 aa5.67□□□□□ -1.5
SDCBP-213ENST00000630925 ERC1Q8IUD2 1116 aa5.67□□□□□ -1.5
SDCBP-213ENST00000630925 RDH13Q8NBN7 331 aa5.67□□□□□ -1.5
SDCBP-213ENST00000630925 OR8H1Q8NGG4 311 aa5.67□□□□□ -1.5
SDCBP-213ENST00000630925 ATP6V1E2Q96A05 226 aa5.67□□□□□ -1.5
SDCBP-213ENST00000630925 ATP6V0A4Q9HBG4 840 aa5.67□□□□□ -1.5
SDCBP-213ENST00000630925 PDRG1Q9NUG6 133 aa5.67□□□□□ -1.5
SDCBP-213ENST00000630925 EPS15L1Q9UBC2 864 aa5.67□□□□□ -1.5
SDCBP-213ENST00000630925 PPARGC1AQ9UBK2 798 aaKnown RBP5.67□□□□□ -1.5
SDCBP-213ENST00000630925 GIMAP2Q9UG22 337 aa5.67□□□□□ -1.5
SDCBP-213ENST00000630925 RGS17Q9UGC6 210 aaPredicted RBP5.67□□□□□ -1.5
SDCBP-213ENST00000630925 DDX20Q9UHI6 824 aaKnown RBP5.67□□□□□ -1.5
SDCBP-213ENST00000630925 ZMYM5Q9UJ78 669 aa5.67□□□□□ -1.5
SDCBP-213ENST00000630925 GJD2Q9UKL4 321 aa5.67□□□□□ -1.5
SDCBP-213ENST00000630925 TRHDEQ9UKU6 1024 aa5.67□□□□□ -1.5
SDCBP-213ENST00000630925 LRRFIP2Q9Y608 721 aaKnown RBP5.67□□□□□ -1.5
SDCBP-213ENST00000630925 CUX1P39880 1505 aa5.67□□□□□ -1.5
SDCBP-213ENST00000630925 A0A087WZG4 1122 aa5.67□□□□□ -1.5
SDCBP-213ENST00000630925 SYNDIG1LA6NDD5 238 aa5.67□□□□□ -1.5
SDCBP-213ENST00000630925 M0R2N6 131 aa5.67□□□□□ -1.5
SDCBP-213ENST00000630925 RFPL3O75679 317 aa5.67□□□□□ -1.5
SDCBP-213ENST00000630925 CD4P01730 458 aa5.67□□□□□ -1.5
SDCBP-213ENST00000630925 MTHFD1P11586 935 aaKnown RBP5.67□□□□□ -1.5
SDCBP-213ENST00000630925 ENPP1P22413 925 aa5.67□□□□□ -1.5
SDCBP-213ENST00000630925 IGFBP4P22692 258 aa5.67□□□□□ -1.5
SDCBP-213ENST00000630925 CTNNA1P35221 906 aaKnown RBP5.67□□□□□ -1.5
SDCBP-213ENST00000630925 ALDH5A1P51649 535 aaPredicted RBP5.67□□□□□ -1.5
SDCBP-213ENST00000630925 HSD17B7P56937 341 aa5.67□□□□□ -1.5
SDCBP-213ENST00000630925 GRM1Q13255 1194 aa5.67□□□□□ -1.5
SDCBP-213ENST00000630925 MINDY4Q4G0A6 757 aa5.67□□□□□ -1.5
SDCBP-213ENST00000630925 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.67□□□□□ -1.5
SDCBP-213ENST00000630925 TMEM67Q5HYA8 995 aa5.67□□□□□ -1.5
SDCBP-213ENST00000630925 ARMC4Q5T2S8 1044 aa5.67□□□□□ -1.5
SDCBP-213ENST00000630925 VPS53Q5VIR6 699 aa5.67□□□□□ -1.5
SDCBP-213ENST00000630925 RNF20Q5VTR2 975 aa5.67□□□□□ -1.5
SDCBP-213ENST00000630925 CATSPER4Q7RTX7 472 aa5.67□□□□□ -1.5
SDCBP-213ENST00000630925 FAM186BQ8IYM0 893 aa5.67□□□□□ -1.5
SDCBP-213ENST00000630925 ZSWIM2Q8NEG5 633 aa5.67□□□□□ -1.5
SDCBP-213ENST00000630925 OCSTAMPQ9BR26 566 aa5.67□□□□□ -1.5
SDCBP-213ENST00000630925 SLC13A1Q9BZW2 595 aa5.67□□□□□ -1.5
SDCBP-213ENST00000630925 TRIM6Q9C030 488 aaPredicted RBP5.67□□□□□ -1.5
SDCBP-213ENST00000630925 YY1AP1Q9H869 796 aa5.67□□□□□ -1.5
SDCBP-213ENST00000630925 STK26Q9P289 416 aa5.67□□□□□ -1.5
SDCBP-213ENST00000630925 FAM198AQ9UFP1 575 aa5.67□□□□□ -1.5
SDCBP-213ENST00000630925 POLIQ9UNA4 740 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms