RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 CUTAO60888 179 aa13.03□□□□□ -0.32
SHPRH-211ENST00000629427 ATP11AP98196 1134 aa13.03□□□□□ -0.32
SHPRH-211ENST00000629427 KIF22Q14807 665 aa13.03□□□□□ -0.32
SHPRH-211ENST00000629427 NONOQ15233 471 aaKnown RBP eCLIP13.03□□□□□ -0.32
SHPRH-211ENST00000629427 FAM102BQ5T8I3 360 aa13.03□□□□□ -0.32
SHPRH-211ENST00000629427 ZBTB40Q9NUA8 1239 aa13.03□□□□□ -0.32
SHPRH-211ENST00000629427 CTTNBP2NLQ9P2B4 639 aa13.03□□□□□ -0.32
SHPRH-211ENST00000629427 RLBP1P12271 317 aa13.03□□□□□ -0.32
SHPRH-211ENST00000629427 ARHGAP44Q17R89 818 aa13.03□□□□□ -0.32
SHPRH-211ENST00000629427 AS3MTQ9HBK9 375 aa13.03□□□□□ -0.32
SHPRH-211ENST00000629427 ZMYM3Q14202 1370 aa13.03□□□□□ -0.32
SHPRH-211ENST00000629427 GAS7O60861 476 aa13.03□□□□□ -0.32
SHPRH-211ENST00000629427 CABP7Q86V35 215 aa13.03□□□□□ -0.32
SHPRH-211ENST00000629427 PRAG1Q86YV5 1406 aa13.03□□□□□ -0.32
SHPRH-211ENST00000629427 SPDYE16A6NNV3 312 aaPredicted RBP13.03□□□□□ -0.32
SHPRH-211ENST00000629427 PPARDQ03181 441 aa13.03□□□□□ -0.32
SHPRH-211ENST00000629427 SPDYE2Q495Y8 402 aa13.03□□□□□ -0.32
SHPRH-211ENST00000629427 TEKT1Q969V4 418 aa13.03□□□□□ -0.32
SHPRH-211ENST00000629427 BIVM-ERCC5R4GMW8 1640 aa13.03□□□□□ -0.32
SHPRH-211ENST00000629427 FRMPD2Q68DX3 1309 aaPredicted RBP13.03□□□□□ -0.32
SHPRH-211ENST00000629427 ST7Q9NRC1 585 aa13.03□□□□□ -0.32
SHPRH-211ENST00000629427 NR1I2O75469 434 aa13.02□□□□□ -0.32
SHPRH-211ENST00000629427 YARSP54577 528 aaKnown RBP13.02□□□□□ -0.32
SHPRH-211ENST00000629427 TFAP4Q01664 338 aa13.02□□□□□ -0.32
SHPRH-211ENST00000629427 NAA25Q14CX7 972 aa13.02□□□□□ -0.32
SHPRH-211ENST00000629427 BSPRYQ5W0U4 402 aa13.02□□□□□ -0.32
SHPRH-211ENST00000629427 ARHGAP27Q6ZUM4 889 aa13.02□□□□□ -0.32
SHPRH-211ENST00000629427 ZKSCAN5Q9Y2L8 839 aa13.02□□□□□ -0.32
SHPRH-211ENST00000629427 HGSO14964 777 aaPredicted RBP13.02□□□□□ -0.32
SHPRH-211ENST00000629427 ZNF202O95125 648 aa13.02□□□□□ -0.32
SHPRH-211ENST00000629427 TBC1D8O95759 1140 aa13.02□□□□□ -0.32
SHPRH-211ENST00000629427 LGR6Q9HBX8 967 aa13.02□□□□□ -0.32
SHPRH-211ENST00000629427 OATP04181 439 aa13.02□□□□□ -0.33
SHPRH-211ENST00000629427 ZNF131P52739 623 aa13.02□□□□□ -0.33
SHPRH-211ENST00000629427 LRMPQ12912 555 aa13.02□□□□□ -0.33
SHPRH-211ENST00000629427 NELFBQ8WX92 580 aa13.02□□□□□ -0.33
SHPRH-211ENST00000629427 DEPTORQ8TB45 409 aa13.02□□□□□ -0.33
SHPRH-211ENST00000629427 PSMB7Q99436 277 aa13.02□□□□□ -0.33
SHPRH-211ENST00000629427 SLC12A2P55011 1212 aa13.02□□□□□ -0.33
SHPRH-211ENST00000629427 EVCP57679 992 aa13.02□□□□□ -0.33
SHPRH-211ENST00000629427 IFRD2Q12894 506 aaPredicted RBP13.02□□□□□ -0.33
SHPRH-211ENST00000629427 IFT20Q8IY31 132 aa13.02□□□□□ -0.33
SHPRH-211ENST00000629427 DIS3L2Q8IYB7 885 aaKnown RBP13.02□□□□□ -0.33
SHPRH-211ENST00000629427 NEDD9Q14511 834 aa13.01□□□□□ -0.33
SHPRH-211ENST00000629427 TBC1D22AQ8WUA7 517 aa13.01□□□□□ -0.33
SHPRH-211ENST00000629427 FAM193BQ96PV7 902 aaPredicted RBP13.01□□□□□ -0.33
SHPRH-211ENST00000629427 VPS54Q9P1Q0 977 aa13.01□□□□□ -0.33
SHPRH-211ENST00000629427 POLR3AO14802 1390 aaPredicted RBP13.01□□□□□ -0.33
SHPRH-211ENST00000629427 ZAP70P43403 619 aa13.01□□□□□ -0.33
SHPRH-211ENST00000629427 POSTNQ15063 836 aa13.01□□□□□ -0.33
SHPRH-211ENST00000629427 KCNJ14Q9UNX9 436 aa13.01□□□□□ -0.33
SHPRH-211ENST00000629427 KRT81Q14533 505 aa13.01□□□□□ -0.33
SHPRH-211ENST00000629427 REXO1Q8N1G1 1221 aaKnown RBP13.01□□□□□ -0.33
SHPRH-211ENST00000629427 MMS19Q96T76 1030 aa13.01□□□□□ -0.33
SHPRH-211ENST00000629427 MFSD14BQ5SR56 506 aa13.01□□□□□ -0.33
SHPRH-211ENST00000629427 ATP10BO94823 1461 aa13.01□□□□□ -0.33
SHPRH-211ENST00000629427 CAPN9O14815 690 aa13.01□□□□□ -0.33
SHPRH-211ENST00000629427 TUBBP07437 444 aa13.01□□□□□ -0.33
SHPRH-211ENST00000629427 GNPTABQ3T906 1256 aa13.01□□□□□ -0.33
SHPRH-211ENST00000629427 LONRF3Q496Y0 759 aa13.01□□□□□ -0.33
SHPRH-211ENST00000629427 CHURC1Q8WUH1 139 aa13.01□□□□□ -0.33
SHPRH-211ENST00000629427 TCP10L2B9ZVM9 353 aa13.01□□□□□ -0.33
SHPRH-211ENST00000629427 SARNPP82979 210 aaKnown RBP13.01□□□□□ -0.33
SHPRH-211ENST00000629427 TAOK1Q7L7X3 1001 aa13.01□□□□□ -0.33
SHPRH-211ENST00000629427 CCDC105Q8IYK2 499 aa13.01□□□□□ -0.33
SHPRH-211ENST00000629427 ARHGEF2Q92974 986 aaKnown RBP13.01□□□□□ -0.33
SHPRH-211ENST00000629427 ORAI2Q96SN7 254 aa13.01□□□□□ -0.33
SHPRH-211ENST00000629427 GOLGA6CA6NDK9 693 aa13□□□□□ -0.33
SHPRH-211ENST00000629427 GOLGA6BA6NDN3 693 aa13□□□□□ -0.33
SHPRH-211ENST00000629427 GOLGA6DP0CG33 693 aa13□□□□□ -0.33
SHPRH-211ENST00000629427 BAG6P46379 1132 aa13□□□□□ -0.33
SHPRH-211ENST00000629427 C4orf50Q6ZRC1 276 aa13□□□□□ -0.33
SHPRH-211ENST00000629427 GOLGA6AQ9NYA3 693 aa13□□□□□ -0.33
SHPRH-211ENST00000629427 PCDHB13Q9Y5F0 798 aa13□□□□□ -0.33
SHPRH-211ENST00000629427 KDM5AP29375 1690 aaKnown RBP13□□□□□ -0.33
SHPRH-211ENST00000629427 PALM3A6NDB9 673 aaPredicted RBP13□□□□□ -0.33
SHPRH-211ENST00000629427 RSAD2Q8WXG1 361 aa13□□□□□ -0.33
SHPRH-211ENST00000629427 UHRF1BP1Q6BDS2 1440 aa13□□□□□ -0.33
SHPRH-211ENST00000629427 CEP104O60308 925 aa13□□□□□ -0.33
SHPRH-211ENST00000629427 ITKQ08881 620 aa13□□□□□ -0.33
SHPRH-211ENST00000629427 PPFIBP2Q8ND30 876 aa13□□□□□ -0.33
SHPRH-211ENST00000629427 SECISBP2LQ93073 1101 aaKnown RBP13□□□□□ -0.33
SHPRH-211ENST00000629427 DCPSQ96C86 337 aaKnown RBP13□□□□□ -0.33
SHPRH-211ENST00000629427 BLZF1Q9H2G9 400 aa13□□□□□ -0.33
SHPRH-211ENST00000629427 SMCO2A6NFE2 343 aa13□□□□□ -0.33
SHPRH-211ENST00000629427 LGSNQ5TDP6 509 aa13□□□□□ -0.33
SHPRH-211ENST00000629427 MIER3Q7Z3K6 550 aa13□□□□□ -0.33
SHPRH-211ENST00000629427 SYCE1Q8N0S2 351 aa13□□□□□ -0.33
SHPRH-211ENST00000629427 SUCLG2Q96I99 432 aa13□□□□□ -0.33
SHPRH-211ENST00000629427 NUP160Q12769 1436 aa13□□□□□ -0.33
SHPRH-211ENST00000629427 CYP2J2P51589 502 aa13□□□□□ -0.33
SHPRH-211ENST00000629427 CTSWP56202 376 aa13□□□□□ -0.33
SHPRH-211ENST00000629427 FANCCQ00597 558 aa13□□□□□ -0.33
SHPRH-211ENST00000629427 KLHL30Q0D2K2 578 aa13□□□□□ -0.33
SHPRH-211ENST00000629427 TNFAIP1Q13829 316 aa13□□□□□ -0.33
SHPRH-211ENST00000629427 GCKRQ14397 625 aa13□□□□□ -0.33
SHPRH-211ENST00000629427 PLCB4Q15147 1175 aa13□□□□□ -0.33
SHPRH-211ENST00000629427 CCDC62Q6P9F0 684 aa13□□□□□ -0.33
SHPRH-211ENST00000629427 YWHAEP62258 255 aaKnown RBP13□□□□□ -0.33
SHPRH-211ENST00000629427 DOK7Q18PE1 504 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms