RNA–Protein interactions for RNA: ENST00000629378.2

SPTAN1-219, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-219ENST00000629378 IGSF3O75054 1194 aa10.91□□□□□ -0.66
SPTAN1-219ENST00000629378 SGPL1O95470 568 aa10.91□□□□□ -0.66
SPTAN1-219ENST00000629378 TFRCP02786 760 aaKnown RBP10.91□□□□□ -0.66
SPTAN1-219ENST00000629378 POLR3DP05423 398 aaPredicted RBP10.91□□□□□ -0.66
SPTAN1-219ENST00000629378 GUCY1A2P33402 732 aa10.91□□□□□ -0.66
SPTAN1-219ENST00000629378 SHMT1P34896 483 aa10.91□□□□□ -0.66
SPTAN1-219ENST00000629378 HERVK_113P62684 666 aa10.91□□□□□ -0.66
SPTAN1-219ENST00000629378 IRX3P78415 501 aaPredicted RBP10.91□□□□□ -0.66
SPTAN1-219ENST00000629378 IRF5Q13568 498 aa10.91□□□□□ -0.66
SPTAN1-219ENST00000629378 RAB3GAP1Q15042 981 aa10.91□□□□□ -0.66
SPTAN1-219ENST00000629378 TTF1Q15361 905 aaPredicted RBP10.91□□□□□ -0.66
SPTAN1-219ENST00000629378 CERKLQ49MI3 558 aaPredicted RBP10.91□□□□□ -0.66
SPTAN1-219ENST00000629378 UBE2Q1Q7Z7E8 422 aa10.91□□□□□ -0.66
SPTAN1-219ENST00000629378 LCORLQ8N3X6 602 aa10.91□□□□□ -0.66
SPTAN1-219ENST00000629378 PXYLP1Q8TE99 480 aa10.91□□□□□ -0.66
SPTAN1-219ENST00000629378 U2AF1L4Q8WU68 220 aaKnown RBP10.91□□□□□ -0.66
SPTAN1-219ENST00000629378 SDR42E1Q8WUS8 393 aa10.91□□□□□ -0.66
SPTAN1-219ENST00000629378 DEFB118Q96PH6 123 aa10.91□□□□□ -0.66
SPTAN1-219ENST00000629378 ARMT1Q9H993 441 aa10.91□□□□□ -0.66
SPTAN1-219ENST00000629378 SERPINB13Q9UIV8 391 aa10.91□□□□□ -0.66
SPTAN1-219ENST00000629378 COLQQ9Y215 455 aaPredicted RBP10.91□□□□□ -0.66
SPTAN1-219ENST00000629378 BAZ2AQ9UIF9 1905 aaKnown RBP10.91□□□□□ -0.66
SPTAN1-219ENST00000629378 CYP2B6P20813 491 aa10.9□□□□□ -0.66
SPTAN1-219ENST00000629378 ABCB5Q2M3G0 1257 aa10.9□□□□□ -0.66
SPTAN1-219ENST00000629378 BMP2KLQ5H9B9 411 aa10.9□□□□□ -0.66
SPTAN1-219ENST00000629378 USP17L2Q6R6M4 530 aa10.9□□□□□ -0.66
SPTAN1-219ENST00000629378 TTC6Q86TZ1 520 aa10.9□□□□□ -0.66
SPTAN1-219ENST00000629378 NKX2-3Q8TAU0 364 aa10.9□□□□□ -0.66
SPTAN1-219ENST00000629378 DYNLL2Q96FJ2 89 aa10.9□□□□□ -0.66
SPTAN1-219ENST00000629378 PAGR1Q9BTK6 254 aa10.9□□□□□ -0.66
SPTAN1-219ENST00000629378 EHD4Q9H223 541 aa10.9□□□□□ -0.66
SPTAN1-219ENST00000629378 PAG1Q9NWQ8 432 aa10.9□□□□□ -0.66
SPTAN1-219ENST00000629378 MCM9Q9NXL9 1143 aa10.9□□□□□ -0.66
SPTAN1-219ENST00000629378 MORF4L1Q9UBU8 362 aa10.9□□□□□ -0.66
SPTAN1-219ENST00000629378 DDX60LQ5H9U9 1706 aaKnown RBP10.89□□□□□ -0.67
SPTAN1-219ENST00000629378 CYP2D7A0A087X1C5 515 aa10.89□□□□□ -0.67
SPTAN1-219ENST00000629378 CNMDO75829 334 aa10.89□□□□□ -0.67
SPTAN1-219ENST00000629378 ATP5JP18859 108 aa10.89□□□□□ -0.67
SPTAN1-219ENST00000629378 SEPT2Q15019 361 aa10.89□□□□□ -0.67
SPTAN1-219ENST00000629378 SLC44A5Q8NCS7 719 aa10.89□□□□□ -0.67
SPTAN1-219ENST00000629378 GPRC5AQ8NFJ5 357 aa10.89□□□□□ -0.67
SPTAN1-219ENST00000629378 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.89□□□□□ -0.67
SPTAN1-219ENST00000629378 CRNKL1Q9BZJ0 848 aaKnown RBP10.89□□□□□ -0.67
SPTAN1-219ENST00000629378 PORCNQ9H237 461 aa10.89□□□□□ -0.67
SPTAN1-219ENST00000629378 PAK6Q9NQU5 681 aaPredicted RBP10.89□□□□□ -0.67
SPTAN1-219ENST00000629378 GINM1Q9NU53 330 aa10.89□□□□□ -0.67
SPTAN1-219ENST00000629378 MYH7P12883 1935 aa10.88□□□□□ -0.67
SPTAN1-219ENST00000629378 A0A1W2PRG0 241 aa10.88□□□□□ -0.67
SPTAN1-219ENST00000629378 MPHOSPH10O00566 681 aaKnown RBP10.88□□□□□ -0.67
SPTAN1-219ENST00000629378 FARP2O94887 1054 aaPredicted RBP10.88□□□□□ -0.67
SPTAN1-219ENST00000629378 MBD4O95243 580 aa10.88□□□□□ -0.67
SPTAN1-219ENST00000629378 ADD2P35612 726 aa10.88□□□□□ -0.67
SPTAN1-219ENST00000629378 PDE1AP54750 535 aa10.88□□□□□ -0.67
SPTAN1-219ENST00000629378 ERVK-9P63128 1117 aa10.88□□□□□ -0.67
SPTAN1-219ENST00000629378 ERVK-24P63145 666 aa10.88□□□□□ -0.67
SPTAN1-219ENST00000629378 GABPAQ06546 454 aa10.88□□□□□ -0.67
SPTAN1-219ENST00000629378 KIAA1755Q5JYT7 1200 aa10.88□□□□□ -0.67
SPTAN1-219ENST00000629378 TTC22Q5TAA0 569 aa10.88□□□□□ -0.67
SPTAN1-219ENST00000629378 CATSPERGQ6ZRH7 1159 aa10.88□□□□□ -0.67
SPTAN1-219ENST00000629378 CERS3Q8IU89 383 aa10.88□□□□□ -0.67
SPTAN1-219ENST00000629378 DIS3LQ8TF46 1054 aaKnown RBP10.88□□□□□ -0.67
SPTAN1-219ENST00000629378 TRIB2Q92519 343 aa10.88□□□□□ -0.67
SPTAN1-219ENST00000629378 FEZ1Q99689 392 aa10.88□□□□□ -0.67
SPTAN1-219ENST00000629378 HAUS7Q99871 368 aa10.88□□□□□ -0.67
SPTAN1-219ENST00000629378 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.88□□□□□ -0.67
SPTAN1-219ENST00000629378 OSBPL3Q9H4L5 887 aa10.88□□□□□ -0.67
SPTAN1-219ENST00000629378 DCP1AQ9NPI6 582 aaPredicted RBP10.88□□□□□ -0.67
SPTAN1-219ENST00000629378 MYH8P13535 1937 aa10.88□□□□□ -0.67
SPTAN1-219ENST00000629378 ALPK3Q96L96 1907 aa10.88□□□□□ -0.67
SPTAN1-219ENST00000629378 SALL3Q9BXA9 1300 aa10.87□□□□□ -0.67
SPTAN1-219ENST00000629378 USP17L15C9J2P7 530 aa10.87□□□□□ -0.67
SPTAN1-219ENST00000629378 USP17L13C9JLJ4 530 aa10.87□□□□□ -0.67
SPTAN1-219ENST00000629378 USP17L11C9JVI0 530 aa10.87□□□□□ -0.67
SPTAN1-219ENST00000629378 USP17L18D6R9N7 530 aa10.87□□□□□ -0.67
SPTAN1-219ENST00000629378 USP17L22D6RA61 530 aa10.87□□□□□ -0.67
SPTAN1-219ENST00000629378 USP17L17D6RBQ6 530 aa10.87□□□□□ -0.67
SPTAN1-219ENST00000629378 USP17L19D6RCP7 530 aa10.87□□□□□ -0.67
SPTAN1-219ENST00000629378 USP17L20D6RJB6 530 aa10.87□□□□□ -0.67
SPTAN1-219ENST00000629378 MX1P20591 662 aa10.87□□□□□ -0.67
SPTAN1-219ENST00000629378 USP17L24Q0WX57 530 aa10.87□□□□□ -0.67
SPTAN1-219ENST00000629378 CCL14Q16627 93 aa10.87□□□□□ -0.67
SPTAN1-219ENST00000629378 TSHZ3Q63HK5 1081 aa10.87□□□□□ -0.67
SPTAN1-219ENST00000629378 CLEC10AQ8IUN9 316 aa10.87□□□□□ -0.67
SPTAN1-219ENST00000629378 PAWRQ96IZ0 340 aaKnown RBP10.87□□□□□ -0.67
SPTAN1-219ENST00000629378 CRISPLD2Q9H0B8 497 aa10.87□□□□□ -0.67
SPTAN1-219ENST00000629378 CABP5Q9NP86 173 aa10.87□□□□□ -0.67
SPTAN1-219ENST00000629378 BTBD7Q9P203 1132 aa10.87□□□□□ -0.67
SPTAN1-219ENST00000629378 STAP2Q9UGK3 403 aa10.87□□□□□ -0.67
SPTAN1-219ENST00000629378 HMGCRP04035 888 aa10.86□□□□□ -0.67
SPTAN1-219ENST00000629378 AKR1B1P15121 316 aa10.86□□□□□ -0.67
SPTAN1-219ENST00000629378 GSPT1P15170 499 aaKnown RBP10.86□□□□□ -0.67
SPTAN1-219ENST00000629378 VCAM1P19320 739 aa10.86□□□□□ -0.67
SPTAN1-219ENST00000629378 TMED8Q6PL24 325 aaPredicted RBP10.86□□□□□ -0.67
SPTAN1-219ENST00000629378 CHRDL2Q6WN34 429 aa10.86□□□□□ -0.67
SPTAN1-219ENST00000629378 GPR142Q7Z601 462 aa10.86□□□□□ -0.67
SPTAN1-219ENST00000629378 SIAH1Q8IUQ4 282 aa10.86□□□□□ -0.67
SPTAN1-219ENST00000629378 USP6NLQ92738 828 aa10.86□□□□□ -0.67
SPTAN1-219ENST00000629378 C12orf42Q96LP6 360 aa10.86□□□□□ -0.67
SPTAN1-219ENST00000629378 NUDT12Q9BQG2 462 aa10.86□□□□□ -0.67
SPTAN1-219ENST00000629378 KIAA1683Q9H0B3 1180 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms