RNA–Protein interactions for RNA: ENST00000628729.2

PDCD6-214, Transcript of programmed cell death 6, humanhuman

TSL 5 BASIC

Gene PDCD6, Length 1,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-214ENST00000628729 Q3C1V9 767 aa20.1■□□□□ 0.81
PDCD6-214ENST00000628729 USP17L2Q6R6M4 530 aa20.1■□□□□ 0.81
PDCD6-214ENST00000628729 CRISPLD2Q9H0B8 497 aa20.1■□□□□ 0.81
PDCD6-214ENST00000628729 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.1■□□□□ 0.81
PDCD6-214ENST00000628729 TRIOBPQ9H2D6 2365 aa20.1■□□□□ 0.81
PDCD6-214ENST00000628729 RLFQ13129 1914 aa20.1■□□□□ 0.81
PDCD6-214ENST00000628729 SMIM22K7EJ46 135 aa20.09■□□□□ 0.81
PDCD6-214ENST00000628729 RAB11FIP3O75154 756 aa20.09■□□□□ 0.81
PDCD6-214ENST00000628729 CNMDO75829 334 aa20.09■□□□□ 0.81
PDCD6-214ENST00000628729 FXR1P51114 621 aaKnown RBP eCLIP20.09■□□□□ 0.81
PDCD6-214ENST00000628729 ERVK-9P63128 1117 aa20.09■□□□□ 0.81
PDCD6-214ENST00000628729 ERVK-24P63145 666 aa20.09■□□□□ 0.81
PDCD6-214ENST00000628729 RAB3GAP1Q15042 981 aa20.09■□□□□ 0.81
PDCD6-214ENST00000628729 ABCB5Q2M3G0 1257 aa20.09■□□□□ 0.81
PDCD6-214ENST00000628729 CERKLQ49MI3 558 aaPredicted RBP20.09■□□□□ 0.81
PDCD6-214ENST00000628729 TTC6Q86TZ1 520 aa20.09■□□□□ 0.81
PDCD6-214ENST00000628729 SLC44A5Q8NCS7 719 aa20.09■□□□□ 0.81
PDCD6-214ENST00000628729 KIAA1683Q9H0B3 1180 aa20.09■□□□□ 0.81
PDCD6-214ENST00000628729 BOLA2Q9H3K6 86 aa20.09■□□□□ 0.81
PDCD6-214ENST00000628729 DCP1AQ9NPI6 582 aaPredicted RBP20.09■□□□□ 0.81
PDCD6-214ENST00000628729 PAG1Q9NWQ8 432 aa20.09■□□□□ 0.81
PDCD6-214ENST00000628729 VCAM1P19320 739 aa20.08■□□□□ 0.81
PDCD6-214ENST00000628729 GPRC5AQ8NFJ5 357 aa20.08■□□□□ 0.81
PDCD6-214ENST00000628729 DIS3LQ8TF46 1054 aaKnown RBP20.08■□□□□ 0.81
PDCD6-214ENST00000628729 PAGR1Q9BTK6 254 aa20.08■□□□□ 0.81
PDCD6-214ENST00000628729 CRNKL1Q9BZJ0 848 aaKnown RBP20.08■□□□□ 0.81
PDCD6-214ENST00000628729 ARMT1Q9H993 441 aa20.08■□□□□ 0.81
PDCD6-214ENST00000628729 MCM9Q9NXL9 1143 aa20.08■□□□□ 0.81
PDCD6-214ENST00000628729 FRMPD3Q5JV73 1810 aa20.08■□□□□ 0.8
PDCD6-214ENST00000628729 PARP14Q460N5 1801 aa20.07■□□□□ 0.8
PDCD6-214ENST00000628729 PRKAB2O43741 272 aa20.07■□□□□ 0.8
PDCD6-214ENST00000628729 ATP5JP18859 108 aa20.07■□□□□ 0.8
PDCD6-214ENST00000628729 ADD2P35612 726 aa20.07■□□□□ 0.8
PDCD6-214ENST00000628729 USP6NLQ92738 828 aa20.07■□□□□ 0.8
PDCD6-214ENST00000628729 FEZ1Q99689 392 aa20.07■□□□□ 0.8
PDCD6-214ENST00000628729 A0A1W2PRG0 241 aa20.06■□□□□ 0.8
PDCD6-214ENST00000628729 SMARCA5O60264 1052 aaPredicted RBP20.06■□□□□ 0.8
PDCD6-214ENST00000628729 POLR3DP05423 398 aaPredicted RBP20.06■□□□□ 0.8
PDCD6-214ENST00000628729 CYP2B6P20813 491 aa20.06■□□□□ 0.8
PDCD6-214ENST00000628729 MNX1P50219 401 aaPredicted RBP20.06■□□□□ 0.8
PDCD6-214ENST00000628729 SEPT2Q15019 361 aa20.06■□□□□ 0.8
PDCD6-214ENST00000628729 MAP3K21Q5TCX8 1036 aa20.06■□□□□ 0.8
PDCD6-214ENST00000628729 GPR142Q7Z601 462 aa20.06■□□□□ 0.8
PDCD6-214ENST00000628729 DPF3Q92784 378 aa20.06■□□□□ 0.8
PDCD6-214ENST00000628729 HAUS7Q99871 368 aa20.06■□□□□ 0.8
PDCD6-214ENST00000628729 MBD4O95243 580 aa20.05■□□□□ 0.8
PDCD6-214ENST00000628729 PDE3AQ14432 1141 aa20.05■□□□□ 0.8
PDCD6-214ENST00000628729 CCL14Q16627 93 aa20.05■□□□□ 0.8
PDCD6-214ENST00000628729 MORN1Q5T089 497 aa20.05■□□□□ 0.8
PDCD6-214ENST00000628729 CHRDL2Q6WN34 429 aa20.05■□□□□ 0.8
PDCD6-214ENST00000628729 CATSPERGQ6ZRH7 1159 aa20.05■□□□□ 0.8
PDCD6-214ENST00000628729 CLEC10AQ8IUN9 316 aa20.05■□□□□ 0.8
PDCD6-214ENST00000628729 DYNLL2Q96FJ2 89 aa20.05■□□□□ 0.8
PDCD6-214ENST00000628729 CYP2D7A0A087X1C5 515 aa20.04■□□□□ 0.8
PDCD6-214ENST00000628729 USP17L15C9J2P7 530 aa20.04■□□□□ 0.8
PDCD6-214ENST00000628729 USP17L13C9JLJ4 530 aa20.04■□□□□ 0.8
PDCD6-214ENST00000628729 USP17L11C9JVI0 530 aa20.04■□□□□ 0.8
PDCD6-214ENST00000628729 USP17L18D6R9N7 530 aa20.04■□□□□ 0.8
PDCD6-214ENST00000628729 USP17L22D6RA61 530 aa20.04■□□□□ 0.8
PDCD6-214ENST00000628729 USP17L17D6RBQ6 530 aa20.04■□□□□ 0.8
PDCD6-214ENST00000628729 USP17L19D6RCP7 530 aa20.04■□□□□ 0.8
PDCD6-214ENST00000628729 USP17L20D6RJB6 530 aa20.04■□□□□ 0.8
PDCD6-214ENST00000628729 TFRCP02786 760 aaKnown RBP20.04■□□□□ 0.8
PDCD6-214ENST00000628729 MAPK4P31152 587 aa20.04■□□□□ 0.8
PDCD6-214ENST00000628729 USP17L24Q0WX57 530 aa20.04■□□□□ 0.8
PDCD6-214ENST00000628729 KIAA1755Q5JYT7 1200 aa20.04■□□□□ 0.8
PDCD6-214ENST00000628729 SOCS4Q8WXH5 440 aa20.04■□□□□ 0.8
PDCD6-214ENST00000628729 PAWRQ96IZ0 340 aaKnown RBP20.04■□□□□ 0.8
PDCD6-214ENST00000628729 NUDT12Q9BQG2 462 aa20.04■□□□□ 0.8
PDCD6-214ENST00000628729 HTATIP2Q9BUP3 242 aa20.04■□□□□ 0.8
PDCD6-214ENST00000628729 PRO3102Q9H379 93 aa20.04■□□□□ 0.8
PDCD6-214ENST00000628729 BTBD7Q9P203 1132 aa20.04■□□□□ 0.8
PDCD6-214ENST00000628729 ZNF236Q9UL36 1845 aa20.04■□□□□ 0.8
PDCD6-214ENST00000628729 RPTORQ8N122 1335 aa20.03■□□□□ 0.8
PDCD6-214ENST00000628729 SPDYE16A6NNV3 312 aaPredicted RBP20.03■□□□□ 0.8
PDCD6-214ENST00000628729 XRCC5P13010 732 aaKnown RBP20.03■□□□□ 0.8
PDCD6-214ENST00000628729 PRKAR2AP13861 404 aaKnown RBP20.03■□□□□ 0.8
PDCD6-214ENST00000628729 USP14P54578 494 aa20.03■□□□□ 0.8
PDCD6-214ENST00000628729 LBX2Q6XYB7 198 aa20.03■□□□□ 0.8
PDCD6-214ENST00000628729 GTF3C2Q8WUA4 911 aaPredicted RBP20.03■□□□□ 0.8
PDCD6-214ENST00000628729 LRRCC1Q9C099 1032 aa20.03■□□□□ 0.8
PDCD6-214ENST00000628729 RPAP3Q9H6T3 665 aaPredicted RBP20.03■□□□□ 0.8
PDCD6-214ENST00000628729 PCDH10Q9P2E7 1040 aa20.03■□□□□ 0.8
PDCD6-214ENST00000628729 RBM27Q9P2N5 1060 aaKnown RBP20.03■□□□□ 0.8
PDCD6-214ENST00000628729 GREB1LQ9C091 1923 aaPredicted RBP20.03■□□□□ 0.8
PDCD6-214ENST00000628729 SIAH1Q8IUQ4 282 aa20.02■□□□□ 0.8
PDCD6-214ENST00000628729 HMX1Q9NP08 348 aaPredicted RBP20.02■□□□□ 0.8
PDCD6-214ENST00000628729 CABP5Q9NP86 173 aa20.02■□□□□ 0.8
PDCD6-214ENST00000628729 RABGAP1Q9Y3P9 1069 aa20.02■□□□□ 0.8
PDCD6-214ENST00000628729 MPHOSPH10O00566 681 aaKnown RBP20.01■□□□□ 0.79
PDCD6-214ENST00000628729 AKR1B1P15121 316 aa20.01■□□□□ 0.79
PDCD6-214ENST00000628729 PLEKHH3Q7Z736 793 aa20.01■□□□□ 0.79
PDCD6-214ENST00000628729 DNAH12Q6ZR08 3092 aa20.01■□□□□ 0.79
PDCD6-214ENST00000628729 ZKSCAN1P17029 563 aaPredicted RBP20■□□□□ 0.79
PDCD6-214ENST00000628729 CACNB2Q08289 660 aaPredicted RBP20■□□□□ 0.79
PDCD6-214ENST00000628729 TSHZ3Q63HK5 1081 aa20■□□□□ 0.79
PDCD6-214ENST00000628729 APBA2Q99767 749 aa20■□□□□ 0.79
PDCD6-214ENST00000628729 PUS7LQ9H0K6 701 aaKnown RBP20■□□□□ 0.79
PDCD6-214ENST00000628729 CHMP4BQ9H444 224 aaKnown RBP20■□□□□ 0.79
PDCD6-214ENST00000628729 FLRT1Q9NZU1 646 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms