RNA–Protein interactions for RNA: ENST00000628496.2

SOX2-OT-248, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 801 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-248ENST00000628496 GPR25O00155 361 aa16.18■□□□□ 0.18
SOX2-OT-248ENST00000628496 PRDM1O75626 825 aa16.18■□□□□ 0.18
SOX2-OT-248ENST00000628496 MFAP1P55081 439 aaKnown RBP16.18■□□□□ 0.18
SOX2-OT-248ENST00000628496 NOM1Q5C9Z4 860 aaKnown RBP16.18■□□□□ 0.18
SOX2-OT-248ENST00000628496 CLEC10AQ8IUN9 316 aa16.18■□□□□ 0.18
SOX2-OT-248ENST00000628496 PROCA1Q8NCQ7 364 aaPredicted RBP16.18■□□□□ 0.18
SOX2-OT-248ENST00000628496 ACER1Q8TDN7 264 aa16.18■□□□□ 0.18
SOX2-OT-248ENST00000628496 ZNF296Q8WUU4 475 aaPredicted RBP16.18■□□□□ 0.18
SOX2-OT-248ENST00000628496 CCDC17Q96LX7 622 aa16.18■□□□□ 0.18
SOX2-OT-248ENST00000628496 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.18■□□□□ 0.18
SOX2-OT-248ENST00000628496 AGTPBP1Q9UPW5 1226 aa16.18■□□□□ 0.18
SOX2-OT-248ENST00000628496 CTDSPL2Q05D32 466 aa16.17■□□□□ 0.18
SOX2-OT-248ENST00000628496 MKNK2Q9HBH9 465 aa16.17■□□□□ 0.18
SOX2-OT-248ENST00000628496 ZFYVE28Q9HCC9 887 aa16.17■□□□□ 0.18
SOX2-OT-248ENST00000628496 ANAPC4Q9UJX5 808 aa16.17■□□□□ 0.18
SOX2-OT-248ENST00000628496 SLC45A1Q9Y2W3 748 aa16.17■□□□□ 0.18
SOX2-OT-248ENST00000628496 TACC3Q9Y6A5 838 aa16.17■□□□□ 0.18
SOX2-OT-248ENST00000628496 RAD50Q92878 1312 aa16.17■□□□□ 0.18
SOX2-OT-248ENST00000628496 ADGRA2Q96PE1 1338 aa16.17■□□□□ 0.18
SOX2-OT-248ENST00000628496 A0A1W2PRG0 241 aa16.16■□□□□ 0.18
SOX2-OT-248ENST00000628496 C19orf81C9J6K1 198 aa16.16■□□□□ 0.18
SOX2-OT-248ENST00000628496 CYP2C8P10632 490 aa16.16■□□□□ 0.18
SOX2-OT-248ENST00000628496 ICA1Q05084 483 aa16.16■□□□□ 0.18
SOX2-OT-248ENST00000628496 ZYXQ15942 572 aaKnown RBP16.16■□□□□ 0.18
SOX2-OT-248ENST00000628496 BMP2KLQ5H9B9 411 aa16.16■□□□□ 0.18
SOX2-OT-248ENST00000628496 SIAH1Q8IUQ4 282 aa16.16■□□□□ 0.18
SOX2-OT-248ENST00000628496 FEZ1Q99689 392 aa16.16■□□□□ 0.18
SOX2-OT-248ENST00000628496 KIAA1683Q9H0B3 1180 aa16.16■□□□□ 0.18
SOX2-OT-248ENST00000628496 INCENPQ9NQS7 918 aa16.16■□□□□ 0.18
SOX2-OT-248ENST00000628496 EMILIN3Q9NT22 766 aa16.16■□□□□ 0.18
SOX2-OT-248ENST00000628496 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.16■□□□□ 0.18
SOX2-OT-248ENST00000628496 LOC285556D6RIA3 1793 aa16.15■□□□□ 0.18
SOX2-OT-248ENST00000628496 TLR2O60603 784 aa16.15■□□□□ 0.18
SOX2-OT-248ENST00000628496 SLC3A2P08195 630 aaKnown RBP16.15■□□□□ 0.18
SOX2-OT-248ENST00000628496 PDE4BQ07343 736 aa16.15■□□□□ 0.18
SOX2-OT-248ENST00000628496 C12orf42Q96LP6 360 aa16.15■□□□□ 0.18
SOX2-OT-248ENST00000628496 PARK7Q99497 189 aaKnown RBP16.15■□□□□ 0.18
SOX2-OT-248ENST00000628496 DSCC1Q9BVC3 393 aa16.15■□□□□ 0.18
SOX2-OT-248ENST00000628496 NBPF3Q9H094 633 aa16.15■□□□□ 0.18
SOX2-OT-248ENST00000628496 ZNF287Q9HBT7 754 aa16.15■□□□□ 0.18
SOX2-OT-248ENST00000628496 TMOD4Q9NZQ9 345 aa16.15■□□□□ 0.18
SOX2-OT-248ENST00000628496 SGSM2O43147 1006 aa16.14■□□□□ 0.17
SOX2-OT-248ENST00000628496 FKTNO75072 461 aa16.14■□□□□ 0.17
SOX2-OT-248ENST00000628496 HAND2P61296 217 aa16.14■□□□□ 0.17
SOX2-OT-248ENST00000628496 USP17L2Q6R6M4 530 aa16.14■□□□□ 0.17
SOX2-OT-248ENST00000628496 RUFY2Q8WXA3 655 aa16.14■□□□□ 0.17
SOX2-OT-248ENST00000628496 PTPRFP10586 1907 aa16.13■□□□□ 0.17
SOX2-OT-248ENST00000628496 IGKV6D-41A0A0C4DH26 115 aa16.13■□□□□ 0.17
SOX2-OT-248ENST00000628496 FGRP09769 529 aa16.13■□□□□ 0.17
SOX2-OT-248ENST00000628496 EEF2P13639 858 aaKnown RBP16.13■□□□□ 0.17
SOX2-OT-248ENST00000628496 USP14P54578 494 aa16.13■□□□□ 0.17
SOX2-OT-248ENST00000628496 FAM47AQ5JRC9 791 aa16.13■□□□□ 0.17
SOX2-OT-248ENST00000628496 C17orf99Q6UX52 265 aa16.13■□□□□ 0.17
SOX2-OT-248ENST00000628496 ZNF444Q8N0Y2 327 aaPredicted RBP16.13■□□□□ 0.17
SOX2-OT-248ENST00000628496 ASCC2Q9H1I8 757 aaPredicted RBP16.13■□□□□ 0.17
SOX2-OT-248ENST00000628496 KANSL2Q9H9L4 492 aa16.13■□□□□ 0.17
SOX2-OT-248ENST00000628496 CPA4Q9UI42 421 aa16.13■□□□□ 0.17
SOX2-OT-248ENST00000628496 PLIN4Q96Q06 1357 aa16.13■□□□□ 0.17
SOX2-OT-248ENST00000628496 VCAM1P19320 739 aa16.12■□□□□ 0.17
SOX2-OT-248ENST00000628496 HOXA7P31268 230 aaPredicted RBP16.12■□□□□ 0.17
SOX2-OT-248ENST00000628496 CAP1Q01518 475 aa16.12■□□□□ 0.17
SOX2-OT-248ENST00000628496 SP3Q02447 781 aa16.12■□□□□ 0.17
SOX2-OT-248ENST00000628496 PTH1RQ03431 593 aa16.12■□□□□ 0.17
SOX2-OT-248ENST00000628496 KIAA1755Q5JYT7 1200 aa16.12■□□□□ 0.17
SOX2-OT-248ENST00000628496 TBC1D10CQ8IV04 446 aa16.12■□□□□ 0.17
SOX2-OT-248ENST00000628496 ARHGEF10LQ9HCE6 1279 aa16.12■□□□□ 0.17
SOX2-OT-248ENST00000628496 TMX2Q9Y320 296 aa16.12■□□□□ 0.17
SOX2-OT-248ENST00000628496 ORC4O43929 436 aa16.11■□□□□ 0.17
SOX2-OT-248ENST00000628496 BCRP11274 1271 aa16.11■□□□□ 0.17
SOX2-OT-248ENST00000628496 TFAP4Q01664 338 aa16.11■□□□□ 0.17
SOX2-OT-248ENST00000628496 ATP2B2Q01814 1243 aa16.11■□□□□ 0.17
SOX2-OT-248ENST00000628496 PABPC4Q13310 644 aaKnown RBP eCLIP16.11■□□□□ 0.17
SOX2-OT-248ENST00000628496 NEDD1Q8NHV4 660 aa16.11■□□□□ 0.17
SOX2-OT-248ENST00000628496 CD99L2Q8TCZ2 262 aa16.11■□□□□ 0.17
SOX2-OT-248ENST00000628496 STAG1Q8WVM7 1258 aa16.11■□□□□ 0.17
SOX2-OT-248ENST00000628496 CEP95Q96GE4 821 aa16.11■□□□□ 0.17
SOX2-OT-248ENST00000628496 PNMA3Q9UL41 463 aa16.11■□□□□ 0.17
SOX2-OT-248ENST00000628496 GREB1LQ9C091 1923 aaPredicted RBP16.11■□□□□ 0.17
SOX2-OT-248ENST00000628496 TSPY3P0CV98 308 aa16.1■□□□□ 0.17
SOX2-OT-248ENST00000628496 TSPY8P0CW00 308 aa16.1■□□□□ 0.17
SOX2-OT-248ENST00000628496 OSBPP22059 807 aa16.1■□□□□ 0.17
SOX2-OT-248ENST00000628496 AKNAD1Q5T1N1 836 aa16.1■□□□□ 0.17
SOX2-OT-248ENST00000628496 NKX2-3Q8TAU0 364 aa16.1■□□□□ 0.17
SOX2-OT-248ENST00000628496 SMCR8Q8TEV9 937 aaPredicted RBP16.1■□□□□ 0.17
SOX2-OT-248ENST00000628496 RPAP3Q9H6T3 665 aaPredicted RBP16.1■□□□□ 0.17
SOX2-OT-248ENST00000628496 SH2D4AQ9H788 454 aa16.1■□□□□ 0.17
SOX2-OT-248ENST00000628496 VCPKMTQ9H867 229 aa16.1■□□□□ 0.17
SOX2-OT-248ENST00000628496 MTMR4Q9NYA4 1195 aa16.1■□□□□ 0.17
SOX2-OT-248ENST00000628496 NYAP2Q9P242 653 aa16.1■□□□□ 0.17
SOX2-OT-248ENST00000628496 TSPY2A6NKD2 308 aa16.09■□□□□ 0.17
SOX2-OT-248ENST00000628496 ZNF213O14771 459 aa16.09■□□□□ 0.17
SOX2-OT-248ENST00000628496 IRX3P78415 501 aaPredicted RBP16.09■□□□□ 0.17
SOX2-OT-248ENST00000628496 RRP12Q5JTH9 1297 aaKnown RBP16.09■□□□□ 0.17
SOX2-OT-248ENST00000628496 CTU1Q7Z7A3 348 aaKnown RBP16.09■□□□□ 0.17
SOX2-OT-248ENST00000628496 SPICE1Q8N0Z3 855 aa16.09■□□□□ 0.17
SOX2-OT-248ENST00000628496 ERO1AQ96HE7 468 aa16.09■□□□□ 0.17
SOX2-OT-248ENST00000628496 P2RX7Q99572 595 aaKnown RBP16.09■□□□□ 0.17
SOX2-OT-248ENST00000628496 ESYT1Q9BSJ8 1104 aa16.09■□□□□ 0.17
SOX2-OT-248ENST00000628496 ARHGAP39Q9C0H5 1083 aa16.09■□□□□ 0.17
SOX2-OT-248ENST00000628496 IL17RBQ9NRM6 502 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms