RNA–Protein interactions for RNA: ENST00000628347.1

SOX2-OT-247, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 445 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-247ENST00000628347 USP17L11C9JVI0 530 aa15.09■□□□□ 0.01
SOX2-OT-247ENST00000628347 USP17L18D6R9N7 530 aa15.09■□□□□ 0.01
SOX2-OT-247ENST00000628347 USP17L22D6RA61 530 aa15.09■□□□□ 0.01
SOX2-OT-247ENST00000628347 USP17L17D6RBQ6 530 aa15.09■□□□□ 0.01
SOX2-OT-247ENST00000628347 USP17L19D6RCP7 530 aa15.09■□□□□ 0.01
SOX2-OT-247ENST00000628347 USP17L20D6RJB6 530 aa15.09■□□□□ 0.01
SOX2-OT-247ENST00000628347 APBB1O00213 710 aa15.09■□□□□ 0.01
SOX2-OT-247ENST00000628347 TFRCP02786 760 aaKnown RBP15.09■□□□□ 0.01
SOX2-OT-247ENST00000628347 POLR3DP05423 398 aaPredicted RBP15.09■□□□□ 0.01
SOX2-OT-247ENST00000628347 ATP5JP18859 108 aa15.09■□□□□ 0.01
SOX2-OT-247ENST00000628347 USP17L24Q0WX57 530 aa15.09■□□□□ 0.01
SOX2-OT-247ENST00000628347 POTEEQ6S8J3 1075 aa15.09■□□□□ 0.01
SOX2-OT-247ENST00000628347 LBX2Q6XYB7 198 aa15.09■□□□□ 0.01
SOX2-OT-247ENST00000628347 TRMT44Q8IYL2 757 aaKnown RBP15.09■□□□□ 0.01
SOX2-OT-247ENST00000628347 ANKLE1Q8NAG6 615 aa15.09■□□□□ 0.01
SOX2-OT-247ENST00000628347 USP6NLQ92738 828 aa15.09■□□□□ 0.01
SOX2-OT-247ENST00000628347 DNAJC2Q99543 621 aaKnown RBP15.09■□□□□ 0.01
SOX2-OT-247ENST00000628347 NUDT12Q9BQG2 462 aa15.09■□□□□ 0.01
SOX2-OT-247ENST00000628347 RNF216Q9NWF9 866 aaPredicted RBP15.09■□□□□ 0.01
SOX2-OT-247ENST00000628347 RABGAP1Q9Y3P9 1069 aa15.09■□□□□ 0.01
SOX2-OT-247ENST00000628347 RPTORQ8N122 1335 aa15.09■□□□□ 0.01
SOX2-OT-247ENST00000628347 GUCY1A2P33402 732 aa15.08■□□□□ 0
SOX2-OT-247ENST00000628347 ADD2P35612 726 aa15.08■□□□□ 0
SOX2-OT-247ENST00000628347 FXR1P51114 621 aaKnown RBP eCLIP15.08■□□□□ 0
SOX2-OT-247ENST00000628347 RAB3GAP1Q15042 981 aa15.08■□□□□ 0
SOX2-OT-247ENST00000628347 Q3C1V9 767 aa15.08■□□□□ 0
SOX2-OT-247ENST00000628347 MAP3K21Q5TCX8 1036 aa15.08■□□□□ 0
SOX2-OT-247ENST00000628347 POTEHQ6S545 545 aa15.08■□□□□ 0
SOX2-OT-247ENST00000628347 CATSPERGQ6ZRH7 1159 aa15.08■□□□□ 0
SOX2-OT-247ENST00000628347 LCORLQ8N3X6 602 aa15.08■□□□□ 0
SOX2-OT-247ENST00000628347 TRIB2Q92519 343 aa15.08■□□□□ 0
SOX2-OT-247ENST00000628347 FEZ1Q99689 392 aa15.08■□□□□ 0
SOX2-OT-247ENST00000628347 HAUS7Q99871 368 aa15.08■□□□□ 0
SOX2-OT-247ENST00000628347 HMX1Q9NP08 348 aaPredicted RBP15.08■□□□□ 0
SOX2-OT-247ENST00000628347 DCP1AQ9NPI6 582 aaPredicted RBP15.08■□□□□ 0
SOX2-OT-247ENST00000628347 PAG1Q9NWQ8 432 aa15.08■□□□□ 0
SOX2-OT-247ENST00000628347 MCM9Q9NXL9 1143 aa15.08■□□□□ 0
SOX2-OT-247ENST00000628347 NR2E3Q9Y5X4 410 aa15.08■□□□□ 0
SOX2-OT-247ENST00000628347 TRIOBPQ9H2D6 2365 aa15.08■□□□□ 0
SOX2-OT-247ENST00000628347 PEX10O60683 326 aa15.07■□□□□ 0
SOX2-OT-247ENST00000628347 CNMDO75829 334 aa15.07■□□□□ 0
SOX2-OT-247ENST00000628347 VCAM1P19320 739 aa15.07■□□□□ 0
SOX2-OT-247ENST00000628347 MORN1Q5T089 497 aa15.07■□□□□ 0
SOX2-OT-247ENST00000628347 GPR142Q7Z601 462 aa15.07■□□□□ 0
SOX2-OT-247ENST00000628347 ACER1Q8TDN7 264 aa15.07■□□□□ 0
SOX2-OT-247ENST00000628347 EDC3Q96F86 508 aaKnown RBP15.07■□□□□ 0
SOX2-OT-247ENST00000628347 PORCNQ9H237 461 aa15.07■□□□□ 0
SOX2-OT-247ENST00000628347 BOLA2Q9H3K6 86 aa15.07■□□□□ 0
SOX2-OT-247ENST00000628347 ATP8A2Q9NTI2 1148 aa15.07■□□□□ 0
SOX2-OT-247ENST00000628347 SWAP70Q9UH65 585 aa15.07■□□□□ 0
SOX2-OT-247ENST00000628347 MYH7P12883 1935 aa15.07■□□□□ 0
SOX2-OT-247ENST00000628347 RANBP2P49792 3224 aaKnown RBP15.06■□□□□ 0
SOX2-OT-247ENST00000628347 CYP2B6P20813 491 aa15.06■□□□□ 0
SOX2-OT-247ENST00000628347 RGS2P41220 211 aa15.06■□□□□ 0
SOX2-OT-247ENST00000628347 TRIM32Q13049 653 aa15.06■□□□□ 0
SOX2-OT-247ENST00000628347 SEPT2Q15019 361 aa15.06■□□□□ 0
SOX2-OT-247ENST00000628347 ZYXQ15942 572 aaKnown RBP15.06■□□□□ 0
SOX2-OT-247ENST00000628347 PLEKHH3Q7Z736 793 aa15.06■□□□□ 0
SOX2-OT-247ENST00000628347 SDR42E1Q8WUS8 393 aa15.06■□□□□ 0
SOX2-OT-247ENST00000628347 PAGR1Q9BTK6 254 aa15.06■□□□□ 0
SOX2-OT-247ENST00000628347 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.06■□□□□ 0
SOX2-OT-247ENST00000628347 CCNA1P78396 465 aa15.05■□□□□ -0
SOX2-OT-247ENST00000628347 EVX2Q03828 476 aa15.05■□□□□ -0
SOX2-OT-247ENST00000628347 UBE3CQ15386 1083 aa15.05■□□□□ -0
SOX2-OT-247ENST00000628347 C20orf194Q5TEA3 1177 aa15.05■□□□□ -0
SOX2-OT-247ENST00000628347 CHRDL2Q6WN34 429 aa15.05■□□□□ -0
SOX2-OT-247ENST00000628347 NECAB2Q7Z6G3 386 aa15.05■□□□□ -0
SOX2-OT-247ENST00000628347 PAWRQ96IZ0 340 aaKnown RBP15.05■□□□□ -0
SOX2-OT-247ENST00000628347 LRRCC1Q9C099 1032 aa15.05■□□□□ -0
SOX2-OT-247ENST00000628347 PRO3102Q9H379 93 aa15.05■□□□□ -0
SOX2-OT-247ENST00000628347 ARMT1Q9H993 441 aa15.05■□□□□ -0
SOX2-OT-247ENST00000628347 OGDHLQ9ULD0 1010 aa15.05■□□□□ -0
SOX2-OT-247ENST00000628347 ALPK3Q96L96 1907 aa15.05■□□□□ -0
SOX2-OT-247ENST00000628347 MYH8P13535 1937 aa15.04■□□□□ -0
SOX2-OT-247ENST00000628347 SPDYE16A6NNV3 312 aaPredicted RBP15.04■□□□□ -0
SOX2-OT-247ENST00000628347 GLRX3O76003 335 aaKnown RBP15.04■□□□□ -0
SOX2-OT-247ENST00000628347 MBD4O95243 580 aa15.04■□□□□ -0
SOX2-OT-247ENST00000628347 ZKSCAN1P17029 563 aaPredicted RBP15.04■□□□□ -0
SOX2-OT-247ENST00000628347 TMEM179Q6ZVK1 233 aa15.04■□□□□ -0
SOX2-OT-247ENST00000628347 CCAR1Q8IX12 1150 aaKnown RBP15.04■□□□□ -0
SOX2-OT-247ENST00000628347 APBA2Q99767 749 aa15.04■□□□□ -0
SOX2-OT-247ENST00000628347 RPAP3Q9H6T3 665 aaPredicted RBP15.04■□□□□ -0
SOX2-OT-247ENST00000628347 BAZ2AQ9UIF9 1905 aaKnown RBP15.04■□□□□ -0
SOX2-OT-247ENST00000628347 A0A1W2PRG0 241 aa15.03■□□□□ -0
SOX2-OT-247ENST00000628347 SLC15A5A6NIM6 579 aa15.03■□□□□ -0
SOX2-OT-247ENST00000628347 EVI5O60447 810 aa15.03■□□□□ -0
SOX2-OT-247ENST00000628347 CYP2D6P10635 497 aa15.03■□□□□ -0
SOX2-OT-247ENST00000628347 PRKAR2AP13861 404 aaKnown RBP15.03■□□□□ -0
SOX2-OT-247ENST00000628347 MNX1P50219 401 aaPredicted RBP15.03■□□□□ -0
SOX2-OT-247ENST00000628347 MAP2K5Q13163 448 aa15.03■□□□□ -0
SOX2-OT-247ENST00000628347 ZSCAN25Q6NSZ9 544 aa15.03■□□□□ -0
SOX2-OT-247ENST00000628347 DIS3LQ8TF46 1054 aaKnown RBP15.03■□□□□ -0
SOX2-OT-247ENST00000628347 BTBD7Q9P203 1132 aa15.03■□□□□ -0
SOX2-OT-247ENST00000628347 RLFQ13129 1914 aa15.02■□□□□ -0
SOX2-OT-247ENST00000628347 MPHOSPH10O00566 681 aaKnown RBP15.02■□□□□ -0
SOX2-OT-247ENST00000628347 PRKAB2O43741 272 aa15.02■□□□□ -0
SOX2-OT-247ENST00000628347 HOXC6P09630 235 aa15.02■□□□□ -0
SOX2-OT-247ENST00000628347 PTPREP23469 700 aa15.02■□□□□ -0
SOX2-OT-247ENST00000628347 CACNB2Q08289 660 aaPredicted RBP15.02■□□□□ -0
SOX2-OT-247ENST00000628347 SLFNL1Q499Z3 407 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms