RNA–Protein interactions for RNA: ENST00000627328.2

PTP4A2-220, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5 BASIC

Gene PTP4A2, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-220ENST00000627328 FAM214BQ7L5A3 538 aa5.67□□□□□ -1.5
PTP4A2-220ENST00000627328 PLPPR2Q96GM1 343 aa5.67□□□□□ -1.5
PTP4A2-220ENST00000627328 PRAMEF27A3QJZ7 478 aa5.66□□□□□ -1.5
PTP4A2-220ENST00000627328 LIG3P49916 1009 aa5.66□□□□□ -1.5
PTP4A2-220ENST00000627328 INPP5AQ14642 412 aa5.66□□□□□ -1.5
PTP4A2-220ENST00000627328 C22orf34Q6ZV56 151 aa5.66□□□□□ -1.5
PTP4A2-220ENST00000627328 CCDC84Q86UT8 332 aaPredicted RBP5.66□□□□□ -1.5
PTP4A2-220ENST00000627328 HID1Q8IV36 788 aa5.66□□□□□ -1.5
PTP4A2-220ENST00000627328 KCNN1Q92952 543 aa5.66□□□□□ -1.5
PTP4A2-220ENST00000627328 COX4I2Q96KJ9 171 aa5.66□□□□□ -1.5
PTP4A2-220ENST00000627328 HEXIM2Q96MH2 286 aaKnown RBP5.66□□□□□ -1.5
PTP4A2-220ENST00000627328 KCNC2Q96PR1 638 aa5.66□□□□□ -1.5
PTP4A2-220ENST00000627328 SLC26A8Q96RN1 970 aa5.66□□□□□ -1.5
PTP4A2-220ENST00000627328 FOXQ1Q9C009 403 aa5.66□□□□□ -1.5
PTP4A2-220ENST00000627328 MIR1-1HGQ9H1L0 117 aa5.66□□□□□ -1.5
PTP4A2-220ENST00000627328 PRDM5Q9NQX1 630 aaPredicted RBP5.66□□□□□ -1.5
PTP4A2-220ENST00000627328 GNAT3A8MTJ3 354 aa5.65□□□□□ -1.5
PTP4A2-220ENST00000627328 CLCN7P51798 805 aa5.65□□□□□ -1.5
PTP4A2-220ENST00000627328 ETF1P62495 437 aaKnown RBP5.65□□□□□ -1.5
PTP4A2-220ENST00000627328 PTPN11Q06124 597 aaPredicted RBP5.65□□□□□ -1.5
PTP4A2-220ENST00000627328 CCDC27Q2M243 656 aa5.65□□□□□ -1.5
PTP4A2-220ENST00000627328 TSNAXIP1Q2TAA8 658 aa5.65□□□□□ -1.5
PTP4A2-220ENST00000627328 WIPI1Q5MNZ9 446 aaPredicted RBP5.65□□□□□ -1.5
PTP4A2-220ENST00000627328 FBXO33Q7Z6M2 555 aa5.65□□□□□ -1.5
PTP4A2-220ENST00000627328 CRELD1Q96HD1 420 aa5.65□□□□□ -1.5
PTP4A2-220ENST00000627328 PLAGL2Q9UPG8 496 aa5.65□□□□□ -1.5
PTP4A2-220ENST00000627328 USP31Q70CQ4 1352 aa5.65□□□□□ -1.51
PTP4A2-220ENST00000627328 GFRA2O00451 464 aa5.64□□□□□ -1.51
PTP4A2-220ENST00000627328 EOMESO95936 686 aa5.64□□□□□ -1.51
PTP4A2-220ENST00000627328 PDE4BQ07343 736 aa5.64□□□□□ -1.51
PTP4A2-220ENST00000627328 SLBPQ14493 270 aaKnown RBP eCLIP5.64□□□□□ -1.51
PTP4A2-220ENST00000627328 SORBS3O60504 671 aa5.63□□□□□ -1.51
PTP4A2-220ENST00000627328 SLITRK5O94991 958 aa5.63□□□□□ -1.51
PTP4A2-220ENST00000627328 CST3P01034 146 aaPredicted RBP5.63□□□□□ -1.51
PTP4A2-220ENST00000627328 SRFP11831 508 aa5.63□□□□□ -1.51
PTP4A2-220ENST00000627328 ITIH2P19823 946 aa5.63□□□□□ -1.51
PTP4A2-220ENST00000627328 CYP7A1P22680 504 aa5.63□□□□□ -1.51
PTP4A2-220ENST00000627328 PWP1Q13610 501 aa5.63□□□□□ -1.51
PTP4A2-220ENST00000627328 MEI1Q5TIA1 1274 aa5.63□□□□□ -1.51
PTP4A2-220ENST00000627328 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.63□□□□□ -1.51
PTP4A2-220ENST00000627328 UBE3DQ7Z6J8 389 aa5.63□□□□□ -1.51
PTP4A2-220ENST00000627328 SPACA3Q8IXA5 215 aa5.63□□□□□ -1.51
PTP4A2-220ENST00000627328 MRPL41Q8IXM3 137 aaKnown RBP5.63□□□□□ -1.51
PTP4A2-220ENST00000627328 BCL11AQ9H165 835 aa5.63□□□□□ -1.51
PTP4A2-220ENST00000627328 MRS2Q9HD23 443 aa5.63□□□□□ -1.51
PTP4A2-220ENST00000627328 ADAM30Q9UKF2 790 aa5.63□□□□□ -1.51
PTP4A2-220ENST00000627328 U3KQE9 123 aa5.63□□□□□ -1.51
PTP4A2-220ENST00000627328 TFE3P19532 575 aaPredicted RBP5.62□□□□□ -1.51
PTP4A2-220ENST00000627328 GRK4P32298 578 aa5.62□□□□□ -1.51
PTP4A2-220ENST00000627328 RPL6Q02878 288 aaKnown RBP5.62□□□□□ -1.51
PTP4A2-220ENST00000627328 SLC6A19Q695T7 634 aa5.62□□□□□ -1.51
PTP4A2-220ENST00000627328 MARCH10Q8NA82 808 aaPredicted RBP5.62□□□□□ -1.51
PTP4A2-220ENST00000627328 FBRSQ9HAH7 460 aa5.62□□□□□ -1.51
PTP4A2-220ENST00000627328 RNF19AQ9NV58 838 aa5.62□□□□□ -1.51
PTP4A2-220ENST00000627328 TPX2Q9ULW0 747 aaKnown RBP5.62□□□□□ -1.51
PTP4A2-220ENST00000627328 PCDHB5Q9Y5E4 795 aa5.62□□□□□ -1.51
PTP4A2-220ENST00000627328 CTSHP09668 335 aa5.61□□□□□ -1.51
PTP4A2-220ENST00000627328 GDNFP39905 211 aa5.61□□□□□ -1.51
PTP4A2-220ENST00000627328 KIR3DL1P43629 444 aa5.61□□□□□ -1.51
PTP4A2-220ENST00000627328 SEPT6Q14141 434 aa5.61□□□□□ -1.51
PTP4A2-220ENST00000627328 NKG7Q16617 165 aa5.61□□□□□ -1.51
PTP4A2-220ENST00000627328 NKPD1Q17RQ9 610 aa5.61□□□□□ -1.51
PTP4A2-220ENST00000627328 SFRP5Q5T4F7 317 aa5.61□□□□□ -1.51
PTP4A2-220ENST00000627328 LETMD1Q6P1Q0 360 aa5.61□□□□□ -1.51
PTP4A2-220ENST00000627328 PHC3Q8NDX5 983 aa5.61□□□□□ -1.51
PTP4A2-220ENST00000627328 MIPEPQ99797 713 aa5.61□□□□□ -1.51
PTP4A2-220ENST00000627328 FAM155AB1AL88 458 aaPredicted RBP5.6□□□□□ -1.51
PTP4A2-220ENST00000627328 OVOL3O00110 214 aa5.6□□□□□ -1.51
PTP4A2-220ENST00000627328 PGRP06401 933 aa5.6□□□□□ -1.51
PTP4A2-220ENST00000627328 LMNB2Q03252 620 aa5.6□□□□□ -1.51
PTP4A2-220ENST00000627328 MAP3K11Q16584 847 aa5.6□□□□□ -1.51
PTP4A2-220ENST00000627328 TCERG1LQ5VWI1 586 aa5.6□□□□□ -1.51
PTP4A2-220ENST00000627328 PRAMEF13Q5VWM6 474 aa5.6□□□□□ -1.51
PTP4A2-220ENST00000627328 THAP5Q7Z6K1 395 aa5.6□□□□□ -1.51
PTP4A2-220ENST00000627328 MCATQ8IVS2 390 aaKnown RBP5.6□□□□□ -1.51
PTP4A2-220ENST00000627328 MFSD4AQ8N468 514 aa5.6□□□□□ -1.51
PTP4A2-220ENST00000627328 RSRP1Q9BUV0 290 aa5.6□□□□□ -1.51
PTP4A2-220ENST00000627328 BPNT1O95861 308 aa5.59□□□□□ -1.51
PTP4A2-220ENST00000627328 CDK8P49336 464 aa5.59□□□□□ -1.51
PTP4A2-220ENST00000627328 SPATS1Q496A3 300 aa5.59□□□□□ -1.51
PTP4A2-220ENST00000627328 RELL1Q8IUW5 271 aa5.59□□□□□ -1.51
PTP4A2-220ENST00000627328 PIWIL2Q8TC59 973 aaKnown RBP5.59□□□□□ -1.51
PTP4A2-220ENST00000627328 CCDC120Q96HB5 630 aa5.59□□□□□ -1.51
PTP4A2-220ENST00000627328 TMEM87BQ96K49 555 aa5.59□□□□□ -1.51
PTP4A2-220ENST00000627328 GZF1Q9H116 711 aaPredicted RBP5.59□□□□□ -1.51
PTP4A2-220ENST00000627328 KCNK12Q9HB15 430 aa5.59□□□□□ -1.51
PTP4A2-220ENST00000627328 VTI1BQ9UEU0 232 aa5.59□□□□□ -1.51
PTP4A2-220ENST00000627328 CILPO75339 1184 aa5.58□□□□□ -1.52
PTP4A2-220ENST00000627328 ETV3P41162 512 aa5.58□□□□□ -1.52
PTP4A2-220ENST00000627328 CAMK2GQ13555 558 aaPredicted RBP5.58□□□□□ -1.52
PTP4A2-220ENST00000627328 ZNF326Q5BKZ1 582 aaKnown RBP5.58□□□□□ -1.52
PTP4A2-220ENST00000627328 TMEM201Q5SNT2 666 aa5.58□□□□□ -1.52
PTP4A2-220ENST00000627328 BAHD1Q8TBE0 780 aaPredicted RBP5.58□□□□□ -1.52
PTP4A2-220ENST00000627328 GATAD2BQ8WXI9 593 aa5.58□□□□□ -1.52
PTP4A2-220ENST00000627328 FAM161BQ96MY7 647 aa5.58□□□□□ -1.52
PTP4A2-220ENST00000627328 TMEM74Q96NL1 305 aa5.58□□□□□ -1.52
PTP4A2-220ENST00000627328 TJP2Q9UDY2 1190 aa5.58□□□□□ -1.52
PTP4A2-220ENST00000627328 TLR6Q9Y2C9 796 aa5.58□□□□□ -1.52
PTP4A2-220ENST00000627328 PRR36Q9H6K5 1346 aa5.57□□□□□ -1.52
PTP4A2-220ENST00000627328 FAM221AA4D161 298 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms