RNA–Protein interactions for RNA: ENST00000626466.1

TCF4-253, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-253ENST00000626466 C12orf42Q96LP6 360 aa13.01□□□□□ -0.33
TCF4-253ENST00000626466 NOL10Q9BSC4 688 aaKnown RBP13.01□□□□□ -0.33
TCF4-253ENST00000626466 TLR7Q9NYK1 1049 aaKnown RBP13.01□□□□□ -0.33
TCF4-253ENST00000626466 HDAC5Q9UQL6 1122 aa13.01□□□□□ -0.33
TCF4-253ENST00000626466 FOCADQ5VW36 1801 aa13.01□□□□□ -0.33
TCF4-253ENST00000626466 LTBP2Q14767 1821 aa13□□□□□ -0.33
TCF4-253ENST00000626466 TRIM27P14373 513 aa13□□□□□ -0.33
TCF4-253ENST00000626466 RTP1P59025 263 aa13□□□□□ -0.33
TCF4-253ENST00000626466 TNNI3KQ59H18 835 aa13□□□□□ -0.33
TCF4-253ENST00000626466 TTC39AQ5SRH9 613 aa13□□□□□ -0.33
TCF4-253ENST00000626466 C9orf50Q5SZB4 431 aa13□□□□□ -0.33
TCF4-253ENST00000626466 WDR78Q5VTH9 848 aa13□□□□□ -0.33
TCF4-253ENST00000626466 ANO1Q5XXA6 986 aa13□□□□□ -0.33
TCF4-253ENST00000626466 FOXP4Q8IVH2 680 aaPredicted RBP13□□□□□ -0.33
TCF4-253ENST00000626466 EDC3Q96F86 508 aaKnown RBP13□□□□□ -0.33
TCF4-253ENST00000626466 TRIM34Q9BYJ4 488 aa13□□□□□ -0.33
TCF4-253ENST00000626466 DDX20Q9UHI6 824 aaKnown RBP13□□□□□ -0.33
TCF4-253ENST00000626466 FPGT-TNNI3KV9GXZ4 949 aa13□□□□□ -0.33
TCF4-253ENST00000626466 MYO5AQ9Y4I1 1855 aaKnown RBP12.99□□□□□ -0.33
TCF4-253ENST00000626466 BAG3O95817 575 aa12.99□□□□□ -0.33
TCF4-253ENST00000626466 IGHA2P01877 340 aa12.99□□□□□ -0.33
TCF4-253ENST00000626466 PLCG2P16885 1265 aa12.99□□□□□ -0.33
TCF4-253ENST00000626466 VCAM1P19320 739 aa12.99□□□□□ -0.33
TCF4-253ENST00000626466 PTPREP23469 700 aa12.99□□□□□ -0.33
TCF4-253ENST00000626466 G3BP1Q13283 466 aaKnown RBP eCLIP12.99□□□□□ -0.33
TCF4-253ENST00000626466 CCAR1Q8IX12 1150 aaKnown RBP12.99□□□□□ -0.33
TCF4-253ENST00000626466 MIGA1Q8NAN2 632 aa12.99□□□□□ -0.33
TCF4-253ENST00000626466 FEZ1Q99689 392 aa12.99□□□□□ -0.33
TCF4-253ENST00000626466 RABGAP1Q9Y3P9 1069 aa12.99□□□□□ -0.33
TCF4-253ENST00000626466 SLC15A5A6NIM6 579 aa12.98□□□□□ -0.33
TCF4-253ENST00000626466 SPDYE16A6NNV3 312 aaPredicted RBP12.98□□□□□ -0.33
TCF4-253ENST00000626466 USP17L15C9J2P7 530 aa12.98□□□□□ -0.33
TCF4-253ENST00000626466 USP17L13C9JLJ4 530 aa12.98□□□□□ -0.33
TCF4-253ENST00000626466 USP17L11C9JVI0 530 aa12.98□□□□□ -0.33
TCF4-253ENST00000626466 USP17L18D6R9N7 530 aa12.98□□□□□ -0.33
TCF4-253ENST00000626466 USP17L22D6RA61 530 aa12.98□□□□□ -0.33
TCF4-253ENST00000626466 USP17L17D6RBQ6 530 aa12.98□□□□□ -0.33
TCF4-253ENST00000626466 USP17L19D6RCP7 530 aa12.98□□□□□ -0.33
TCF4-253ENST00000626466 USP17L20D6RJB6 530 aa12.98□□□□□ -0.33
TCF4-253ENST00000626466 GNAI2P04899 355 aa12.98□□□□□ -0.33
TCF4-253ENST00000626466 CT47B1P0C2W7 299 aaPredicted RBP12.98□□□□□ -0.33
TCF4-253ENST00000626466 CYBAP13498 195 aa12.98□□□□□ -0.33
TCF4-253ENST00000626466 CYP7A1P22680 504 aa12.98□□□□□ -0.33
TCF4-253ENST00000626466 CNGA1P29973 690 aa12.98□□□□□ -0.33
TCF4-253ENST00000626466 GUCY1A2P33402 732 aa12.98□□□□□ -0.33
TCF4-253ENST00000626466 USP17L24Q0WX57 530 aa12.98□□□□□ -0.33
TCF4-253ENST00000626466 GRB14Q14449 540 aa12.98□□□□□ -0.33
TCF4-253ENST00000626466 SHHQ15465 462 aa12.98□□□□□ -0.33
TCF4-253ENST00000626466 GJC2Q5T442 439 aaPredicted RBP12.98□□□□□ -0.33
TCF4-253ENST00000626466 MFSD14CQ5VZR4 134 aa12.98□□□□□ -0.33
TCF4-253ENST00000626466 FAM109BQ6ICB4 259 aaPredicted RBP12.98□□□□□ -0.33
TCF4-253ENST00000626466 CATSPERGQ6ZRH7 1159 aa12.98□□□□□ -0.33
TCF4-253ENST00000626466 GTF3C2Q8WUA4 911 aaPredicted RBP12.98□□□□□ -0.33
TCF4-253ENST00000626466 CLUAP1Q96AJ1 413 aa12.98□□□□□ -0.33
TCF4-253ENST00000626466 CWC22Q9HCG8 908 aaKnown RBP12.98□□□□□ -0.33
TCF4-253ENST00000626466 GINM1Q9NU53 330 aa12.98□□□□□ -0.33
TCF4-253ENST00000626466 DBNLQ9UJU6 430 aaKnown RBP12.98□□□□□ -0.33
TCF4-253ENST00000626466 HLA-DOAP06340 250 aa12.97□□□□□ -0.33
TCF4-253ENST00000626466 HOXC6P09630 235 aa12.97□□□□□ -0.33
TCF4-253ENST00000626466 RAB3GAP1Q15042 981 aa12.97□□□□□ -0.33
TCF4-253ENST00000626466 TATDN1Q6P1N9 297 aa12.97□□□□□ -0.33
TCF4-253ENST00000626466 ARHGAP45Q92619 1136 aa12.97□□□□□ -0.33
TCF4-253ENST00000626466 LPAR1Q92633 364 aa12.97□□□□□ -0.33
TCF4-253ENST00000626466 CDX2Q99626 313 aaPredicted RBP12.97□□□□□ -0.33
TCF4-253ENST00000626466 LBHD1Q9BQE6 289 aaPredicted RBP12.97□□□□□ -0.33
TCF4-253ENST00000626466 KIAA1683Q9H0B3 1180 aa12.97□□□□□ -0.33
TCF4-253ENST00000626466 RPAP3Q9H6T3 665 aaPredicted RBP12.97□□□□□ -0.33
TCF4-253ENST00000626466 ATP11BQ9Y2G3 1177 aa12.97□□□□□ -0.33
TCF4-253ENST00000626466 DNM1LO00429 736 aa12.96□□□□□ -0.33
TCF4-253ENST00000626466 BCAR3O75815 825 aa12.96□□□□□ -0.33
TCF4-253ENST00000626466 SHMT1P34896 483 aa12.96□□□□□ -0.33
TCF4-253ENST00000626466 ATP2B2Q01814 1243 aa12.96□□□□□ -0.33
TCF4-253ENST00000626466 TRIM60Q495X7 471 aa12.96□□□□□ -0.33
TCF4-253ENST00000626466 KIAA1755Q5JYT7 1200 aa12.96□□□□□ -0.33
TCF4-253ENST00000626466 ZNF697Q5TEC3 545 aa12.96□□□□□ -0.33
TCF4-253ENST00000626466 SH3RF1Q7Z6J0 888 aa12.96□□□□□ -0.33
TCF4-253ENST00000626466 TTYH1Q9H313 450 aaPredicted RBP12.96□□□□□ -0.33
TCF4-253ENST00000626466 ANTXR1Q9H6X2 564 aa12.96□□□□□ -0.33
TCF4-253ENST00000626466 C1orf115Q9H7X2 142 aa12.96□□□□□ -0.33
TCF4-253ENST00000626466 GPR108Q9NPR9 543 aa12.96□□□□□ -0.33
TCF4-253ENST00000626466 A0A0C4DFX4 3053 aa12.95□□□□□ -0.34
TCF4-253ENST00000626466 A0A1W2PRG0 241 aa12.95□□□□□ -0.34
TCF4-253ENST00000626466 IDH1O75874 414 aaKnown RBP12.95□□□□□ -0.34
TCF4-253ENST00000626466 PLCD1P51178 756 aa12.95□□□□□ -0.34
TCF4-253ENST00000626466 CCNA1P78396 465 aa12.95□□□□□ -0.34
TCF4-253ENST00000626466 PRAMEF19Q5SWL8 479 aa12.95□□□□□ -0.34
TCF4-253ENST00000626466 LBX2Q6XYB7 198 aa12.95□□□□□ -0.34
TCF4-253ENST00000626466 CLEC10AQ8IUN9 316 aa12.95□□□□□ -0.34
TCF4-253ENST00000626466 TMEM57Q8N5G2 664 aa12.95□□□□□ -0.34
TCF4-253ENST00000626466 MAGEB6Q8N7X4 407 aa12.95□□□□□ -0.34
TCF4-253ENST00000626466 MAFAQ8NHW3 353 aaPredicted RBP12.95□□□□□ -0.34
TCF4-253ENST00000626466 MYLIPQ8WY64 445 aa12.95□□□□□ -0.34
TCF4-253ENST00000626466 FRAT1Q92837 279 aaPredicted RBP12.95□□□□□ -0.34
TCF4-253ENST00000626466 BADQ92934 168 aa12.95□□□□□ -0.34
TCF4-253ENST00000626466 MOV10L1Q9BXT6 1211 aaKnown RBP12.95□□□□□ -0.34
TCF4-253ENST00000626466 CCDC8Q9H0W5 538 aaPredicted RBP12.95□□□□□ -0.34
TCF4-253ENST00000626466 PRDM5Q9NQX1 630 aaPredicted RBP12.95□□□□□ -0.34
TCF4-253ENST00000626466 TRIM43BA6NCK2 446 aa12.94□□□□□ -0.34
TCF4-253ENST00000626466 COBLO75128 1261 aa12.94□□□□□ -0.34
TCF4-253ENST00000626466 ADORA2AP29274 412 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms