RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 IGF2BP3O00425 579 aaKnown RBP eCLIP5.22□□□□□ -1.57
CDKL5-208ENST00000624953 ADAMTS4O75173 837 aa5.22□□□□□ -1.57
CDKL5-208ENST00000624953 ATE1O95260 518 aa5.22□□□□□ -1.57
CDKL5-208ENST00000624953 EOMESO95936 686 aa5.22□□□□□ -1.57
CDKL5-208ENST00000624953 CST3P01034 146 aaPredicted RBP5.22□□□□□ -1.57
CDKL5-208ENST00000624953 RXRBP28702 533 aa5.22□□□□□ -1.57
CDKL5-208ENST00000624953 HOXA10P31260 410 aaPredicted RBP5.22□□□□□ -1.57
CDKL5-208ENST00000624953 CDK5R2Q13319 367 aa5.22□□□□□ -1.57
CDKL5-208ENST00000624953 MPP2Q14168 576 aa5.22□□□□□ -1.57
CDKL5-208ENST00000624953 NKG7Q16617 165 aa5.22□□□□□ -1.57
CDKL5-208ENST00000624953 ARMCX6Q7L4S7 300 aa5.22□□□□□ -1.57
CDKL5-208ENST00000624953 HS2ST1Q7LGA3 356 aa5.22□□□□□ -1.57
CDKL5-208ENST00000624953 HEXIM2Q96MH2 286 aaKnown RBP5.22□□□□□ -1.57
CDKL5-208ENST00000624953 TBC1D32Q96NH3 1257 aa5.22□□□□□ -1.57
CDKL5-208ENST00000624953 TNKS2Q9H2K2 1166 aa5.22□□□□□ -1.57
CDKL5-208ENST00000624953 TJP2Q9UDY2 1190 aa5.22□□□□□ -1.57
CDKL5-208ENST00000624953 CCDC9Q9Y3X0 531 aaKnown RBP5.22□□□□□ -1.57
CDKL5-208ENST00000624953 LRRIQ1Q96JM4 1722 aa5.22□□□□□ -1.57
CDKL5-208ENST00000624953 RAPGEF6Q8TEU7 1601 aa5.22□□□□□ -1.57
CDKL5-208ENST00000624953 ATP10BO94823 1461 aa5.21□□□□□ -1.58
CDKL5-208ENST00000624953 SCAMP3O14828 347 aaKnown RBP5.21□□□□□ -1.58
CDKL5-208ENST00000624953 COBLO75128 1261 aa5.21□□□□□ -1.58
CDKL5-208ENST00000624953 LEFTY1O75610 366 aa5.21□□□□□ -1.58
CDKL5-208ENST00000624953 ZNF76P36508 570 aa5.21□□□□□ -1.58
CDKL5-208ENST00000624953 CRKP46108 304 aa5.21□□□□□ -1.58
CDKL5-208ENST00000624953 OXCT1P55809 520 aa5.21□□□□□ -1.58
CDKL5-208ENST00000624953 RACK1P63244 317 aaKnown RBP5.21□□□□□ -1.58
CDKL5-208ENST00000624953 CYP27A1Q02318 531 aa5.21□□□□□ -1.58
CDKL5-208ENST00000624953 REC114Q7Z4M0 266 aa5.21□□□□□ -1.58
CDKL5-208ENST00000624953 RELL1Q8IUW5 271 aa5.21□□□□□ -1.58
CDKL5-208ENST00000624953 ELMO3Q96BJ8 720 aa5.21□□□□□ -1.58
CDKL5-208ENST00000624953 ACSF2Q96CM8 615 aaPredicted RBP5.21□□□□□ -1.58
CDKL5-208ENST00000624953 MRRFQ96E11 262 aaKnown RBP5.21□□□□□ -1.58
CDKL5-208ENST00000624953 NT5C1AQ9BXI3 368 aa5.21□□□□□ -1.58
CDKL5-208ENST00000624953 PRDM10Q9NQV6 1147 aa5.21□□□□□ -1.58
CDKL5-208ENST00000624953 CSADQ9Y600 493 aa5.21□□□□□ -1.58
CDKL5-208ENST00000624953 OAS3Q9Y6K5 1087 aaKnown RBP5.21□□□□□ -1.58
CDKL5-208ENST00000624953 ZMYM4Q5VZL5 1548 aa5.21□□□□□ -1.58
CDKL5-208ENST00000624953 C3P01024 1663 aa5.21□□□□□ -1.58
CDKL5-208ENST00000624953 SETD1BQ9UPS6 1966 aaKnown RBP5.2□□□□□ -1.58
CDKL5-208ENST00000624953 F6X3S4 739 aa5.2□□□□□ -1.58
CDKL5-208ENST00000624953 DNAJA2O60884 412 aa5.2□□□□□ -1.58
CDKL5-208ENST00000624953 SLITRK5O94991 958 aa5.2□□□□□ -1.58
CDKL5-208ENST00000624953 FAM87AP0C7U9 286 aa5.2□□□□□ -1.58
CDKL5-208ENST00000624953 GBP2P32456 591 aaPredicted RBP5.2□□□□□ -1.58
CDKL5-208ENST00000624953 EIF4A3P38919 411 aaKnown RBP5.2□□□□□ -1.58
CDKL5-208ENST00000624953 RAD51AP2Q09MP3 1159 aa5.2□□□□□ -1.58
CDKL5-208ENST00000624953 HID1Q8IV36 788 aa5.2□□□□□ -1.58
CDKL5-208ENST00000624953 MCATQ8IVS2 390 aaKnown RBP5.2□□□□□ -1.58
CDKL5-208ENST00000624953 SLITRK4Q8IW52 837 aa5.2□□□□□ -1.58
CDKL5-208ENST00000624953 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.2□□□□□ -1.58
CDKL5-208ENST00000624953 GOLM1Q8NBJ4 401 aa5.2□□□□□ -1.58
CDKL5-208ENST00000624953 TMEM87AQ8NBN3 555 aa5.2□□□□□ -1.58
CDKL5-208ENST00000624953 DNAJB8Q8NHS0 232 aa5.2□□□□□ -1.58
CDKL5-208ENST00000624953 FBXO27Q8NI29 283 aa5.2□□□□□ -1.58
CDKL5-208ENST00000624953 PPP1R13LQ8WUF5 828 aa5.2□□□□□ -1.58
CDKL5-208ENST00000624953 ZNF296Q8WUU4 475 aaPredicted RBP5.2□□□□□ -1.58
CDKL5-208ENST00000624953 EHMT1Q9H9B1 1298 aa5.2□□□□□ -1.58
CDKL5-208ENST00000624953 DDX41Q9UJV9 622 aaKnown RBP5.2□□□□□ -1.58
CDKL5-208ENST00000624953 CORINQ9Y5Q5 1042 aa5.2□□□□□ -1.58
CDKL5-208ENST00000624953 CNTNAP4Q9C0A0 1308 aa5.2□□□□□ -1.58
CDKL5-208ENST00000624953 HECW1Q76N89 1606 aa5.19□□□□□ -1.58
CDKL5-208ENST00000624953 ZNF865P0CJ78 1059 aaPredicted RBP5.19□□□□□ -1.58
CDKL5-208ENST00000624953 TAL1P17542 331 aaPredicted RBP5.19□□□□□ -1.58
CDKL5-208ENST00000624953 GRK4P32298 578 aa5.19□□□□□ -1.58
CDKL5-208ENST00000624953 HSPA2P54652 639 aa5.19□□□□□ -1.58
CDKL5-208ENST00000624953 HDLBPQ00341 1268 aaKnown RBP5.19□□□□□ -1.58
CDKL5-208ENST00000624953 SLC6A19Q695T7 634 aa5.19□□□□□ -1.58
CDKL5-208ENST00000624953 SLFN12Q8IYM2 578 aa5.19□□□□□ -1.58
CDKL5-208ENST00000624953 MFSD2AQ8NA29 543 aa5.19□□□□□ -1.58
CDKL5-208ENST00000624953 EAF1Q96JC9 268 aaPredicted RBP5.19□□□□□ -1.58
CDKL5-208ENST00000624953 FOXQ1Q9C009 403 aa5.19□□□□□ -1.58
CDKL5-208ENST00000624953 GGT7Q9UJ14 662 aa5.19□□□□□ -1.58
CDKL5-208ENST00000624953 PLAGL2Q9UPG8 496 aa5.19□□□□□ -1.58
CDKL5-208ENST00000624953 SUPT16HQ9Y5B9 1047 aaKnown RBP5.19□□□□□ -1.58
CDKL5-208ENST00000624953 NEO1Q92859 1461 aa5.19□□□□□ -1.58
CDKL5-208ENST00000624953 CFAP74Q9C0B2 1584 aa5.18□□□□□ -1.58
CDKL5-208ENST00000624953 PRAMEF27A3QJZ7 478 aa5.18□□□□□ -1.58
CDKL5-208ENST00000624953 MEIS3P2A8K0S8 358 aa5.18□□□□□ -1.58
CDKL5-208ENST00000624953 RAPGEF3O95398 923 aa5.18□□□□□ -1.58
CDKL5-208ENST00000624953 CYP27C1Q4G0S4 372 aa5.18□□□□□ -1.58
CDKL5-208ENST00000624953 REXO1Q8N1G1 1221 aaKnown RBP5.18□□□□□ -1.58
CDKL5-208ENST00000624953 FBXL6Q8N531 539 aa5.18□□□□□ -1.58
CDKL5-208ENST00000624953 TOP6BLQ8N6T0 577 aa5.18□□□□□ -1.58
CDKL5-208ENST00000624953 GIMAP7Q8NHV1 300 aa5.18□□□□□ -1.58
CDKL5-208ENST00000624953 RASGRP4Q8TDF6 673 aa5.18□□□□□ -1.58
CDKL5-208ENST00000624953 RNF34Q969K3 372 aa5.18□□□□□ -1.58
CDKL5-208ENST00000624953 OSBPL1AQ9BXW6 950 aa5.18□□□□□ -1.58
CDKL5-208ENST00000624953 ATG3Q9NT62 314 aa5.18□□□□□ -1.58
CDKL5-208ENST00000624953 ZC3H7BQ9UGR2 993 aaKnown RBP5.18□□□□□ -1.58
CDKL5-208ENST00000624953 LEMD3Q9Y2U8 911 aa5.18□□□□□ -1.58
CDKL5-208ENST00000624953 LTBP4Q8N2S1 1624 aa5.18□□□□□ -1.58
CDKL5-208ENST00000624953 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.18□□□□□ -1.58
CDKL5-208ENST00000624953 ARHGEF12Q9NZN5 1544 aa5.18□□□□□ -1.58
CDKL5-208ENST00000624953 SUPT6HQ7KZ85 1726 aaKnown RBP5.17□□□□□ -1.58
CDKL5-208ENST00000624953 MYO5CQ9NQX4 1742 aa5.17□□□□□ -1.58
CDKL5-208ENST00000624953 YEATS2Q9ULM3 1422 aa5.17□□□□□ -1.58
CDKL5-208ENST00000624953 RNGTTO60942 597 aaKnown RBP5.17□□□□□ -1.58
CDKL5-208ENST00000624953 HTR3BO95264 441 aa5.17□□□□□ -1.58
CDKL5-208ENST00000624953 GJA8P48165 433 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms