RNA–Protein interactions for RNA: ENST00000624949.1

PCDHB12-203, Transcript of protocadherin beta 12, humanhuman

TSL 2 BASIC

Gene PCDHB12, Length 1,963 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB12-203ENST00000624949 DDX11Q96FC9 970 aa23.79■■□□□ 1.4
PCDHB12-203ENST00000624949 CPLX1O14810 134 aa23.78■■□□□ 1.4
PCDHB12-203ENST00000624949 CDC27P30260 824 aa23.78■■□□□ 1.4
PCDHB12-203ENST00000624949 NSUN7Q8NE18 718 aaKnown RBP23.78■■□□□ 1.4
PCDHB12-203ENST00000624949 L3MBTL3Q96JM7 780 aaPredicted RBP23.78■■□□□ 1.4
PCDHB12-203ENST00000624949 CCDC17Q96LX7 622 aa23.78■■□□□ 1.4
PCDHB12-203ENST00000624949 TEPSINQ96N21 525 aa23.78■■□□□ 1.4
PCDHB12-203ENST00000624949 PLIN4Q96Q06 1357 aa23.78■■□□□ 1.4
PCDHB12-203ENST00000624949 DHX16O60231 1041 aaKnown RBP23.78■■□□□ 1.4
PCDHB12-203ENST00000624949 CHMP4CQ96CF2 233 aa23.78■■□□□ 1.4
PCDHB12-203ENST00000624949 MTMR7Q9Y216 660 aa23.78■■□□□ 1.4
PCDHB12-203ENST00000624949 PRAMEF18Q5VWM3 479 aa23.77■■□□□ 1.4
PCDHB12-203ENST00000624949 TMEM47Q9BQJ4 181 aa23.77■■□□□ 1.4
PCDHB12-203ENST00000624949 LLPHQ9BRT6 129 aaKnown RBP23.77■■□□□ 1.4
PCDHB12-203ENST00000624949 TAOK2Q9UL54 1235 aa23.77■■□□□ 1.4
PCDHB12-203ENST00000624949 PTPDC1A2A3K4 754 aa23.76■■□□□ 1.39
PCDHB12-203ENST00000624949 PKP1Q13835 747 aa23.76■■□□□ 1.39
PCDHB12-203ENST00000624949 RRP1BQ14684 758 aaKnown RBP23.76■■□□□ 1.39
PCDHB12-203ENST00000624949 RTN1Q16799 776 aa23.76■■□□□ 1.39
PCDHB12-203ENST00000624949 FANCBQ8NB91 859 aa23.76■■□□□ 1.39
PCDHB12-203ENST00000624949 PNMA1Q8ND90 353 aa23.76■■□□□ 1.39
PCDHB12-203ENST00000624949 ANKS1AQ92625 1134 aa23.76■■□□□ 1.39
PCDHB12-203ENST00000624949 MTMR4Q9NYA4 1195 aa23.76■■□□□ 1.39
PCDHB12-203ENST00000624949 TROAPQ12815 778 aa23.76■■□□□ 1.39
PCDHB12-203ENST00000624949 ABCB5Q2M3G0 1257 aa23.76■■□□□ 1.39
PCDHB12-203ENST00000624949 FAM217BQ9NTX9 383 aaPredicted RBP23.76■■□□□ 1.39
PCDHB12-203ENST00000624949 IGKV6D-41A0A0C4DH26 115 aa23.75■■□□□ 1.39
PCDHB12-203ENST00000624949 EPHX2P34913 555 aa23.75■■□□□ 1.39
PCDHB12-203ENST00000624949 ATP2B2Q01814 1243 aa23.75■■□□□ 1.39
PCDHB12-203ENST00000624949 NBPF12Q5TAG4 269 aaPredicted RBP23.75■■□□□ 1.39
PCDHB12-203ENST00000624949 TBC1D12O60347 775 aa23.74■■□□□ 1.39
PCDHB12-203ENST00000624949 DDAH1O94760 285 aa23.74■■□□□ 1.39
PCDHB12-203ENST00000624949 SMARCC2Q8TAQ2 1214 aa23.74■■□□□ 1.39
PCDHB12-203ENST00000624949 CLIP2Q9UDT6 1046 aa23.74■■□□□ 1.39
PCDHB12-203ENST00000624949 GH2P01242 217 aa23.74■■□□□ 1.39
PCDHB12-203ENST00000624949 CALM1P0DP23 149 aa23.74■■□□□ 1.39
PCDHB12-203ENST00000624949 CALM2P0DP24 149 aa23.74■■□□□ 1.39
PCDHB12-203ENST00000624949 CALM3P0DP25 149 aa23.74■■□□□ 1.39
PCDHB12-203ENST00000624949 JAG1P78504 1218 aa23.74■■□□□ 1.39
PCDHB12-203ENST00000624949 RAB3GAP1Q15042 981 aa23.74■■□□□ 1.39
PCDHB12-203ENST00000624949 CMTR1Q8N1G2 835 aaKnown RBP23.74■■□□□ 1.39
PCDHB12-203ENST00000624949 TTLL1O95922 423 aa23.73■■□□□ 1.39
PCDHB12-203ENST00000624949 MCM4P33991 863 aa23.73■■□□□ 1.39
PCDHB12-203ENST00000624949 RCAN1P53805 252 aa23.73■■□□□ 1.39
PCDHB12-203ENST00000624949 SEPT2Q15019 361 aa23.73■■□□□ 1.39
PCDHB12-203ENST00000624949 CCDC82Q8N4S0 544 aa23.73■■□□□ 1.39
PCDHB12-203ENST00000624949 FAM184AQ8NB25 1140 aa23.73■■□□□ 1.39
PCDHB12-203ENST00000624949 CABP5Q9NP86 173 aa23.73■■□□□ 1.39
PCDHB12-203ENST00000624949 TOP1P11387 765 aaKnown RBP23.72■■□□□ 1.39
PCDHB12-203ENST00000624949 FOXD4L5Q5VV16 416 aaPredicted RBP23.72■■□□□ 1.39
PCDHB12-203ENST00000624949 CPLX2Q6PUV4 134 aaKnown RBP23.72■■□□□ 1.39
PCDHB12-203ENST00000624949 TMEM179Q6ZVK1 233 aa23.72■■□□□ 1.39
PCDHB12-203ENST00000624949 LRRC47Q8N1G4 583 aaKnown RBP23.72■■□□□ 1.39
PCDHB12-203ENST00000624949 FOXD4L4Q8WXT5 416 aaPredicted RBP23.72■■□□□ 1.39
PCDHB12-203ENST00000624949 PHKBQ93100 1093 aa23.72■■□□□ 1.39
PCDHB12-203ENST00000624949 DCPSQ96C86 337 aaKnown RBP23.72■■□□□ 1.39
PCDHB12-203ENST00000624949 NID2Q14112 1375 aa23.72■■□□□ 1.39
PCDHB12-203ENST00000624949 GREB1LQ9C091 1923 aaPredicted RBP23.72■■□□□ 1.39
PCDHB12-203ENST00000624949 POLR2AP24928 1970 aaKnown RBP23.72■■□□□ 1.39
PCDHB12-203ENST00000624949 CCDC196A0A1B0GTZ2 297 aa23.72■■□□□ 1.39
PCDHB12-203ENST00000624949 DCAF8L1A6NGE4 600 aa23.72■■□□□ 1.39
PCDHB12-203ENST00000624949 NOVP48745 357 aa23.72■■□□□ 1.39
PCDHB12-203ENST00000624949 HMGN5P82970 282 aaKnown RBP23.72■■□□□ 1.39
PCDHB12-203ENST00000624949 USP50Q70EL3 339 aaPredicted RBP23.72■■□□□ 1.39
PCDHB12-203ENST00000624949 CTCFLQ8NI51 663 aaPredicted RBP23.72■■□□□ 1.39
PCDHB12-203ENST00000624949 SYT1P21579 422 aa23.71■■□□□ 1.39
PCDHB12-203ENST00000624949 NUCB2P80303 420 aa23.71■■□□□ 1.39
PCDHB12-203ENST00000624949 EAPPQ56P03 285 aaPredicted RBP23.71■■□□□ 1.39
PCDHB12-203ENST00000624949 TNPO1Q92973 898 aaKnown RBP23.71■■□□□ 1.39
PCDHB12-203ENST00000624949 PITPNM2Q9BZ72 1349 aa23.71■■□□□ 1.39
PCDHB12-203ENST00000624949 IQCA1LA6NCM1 817 aa23.71■■□□□ 1.39
PCDHB12-203ENST00000624949 CDKL5O76039 1030 aa23.71■■□□□ 1.39
PCDHB12-203ENST00000624949 GUCY1A2P33402 732 aa23.71■■□□□ 1.39
PCDHB12-203ENST00000624949 MAP3K10Q02779 954 aa23.71■■□□□ 1.39
PCDHB12-203ENST00000624949 NTRK3Q16288 839 aa23.71■■□□□ 1.39
PCDHB12-203ENST00000624949 LARP1BQ659C4 914 aaKnown RBP23.71■■□□□ 1.39
PCDHB12-203ENST00000624949 RASGRP2Q7LDG7 609 aa23.71■■□□□ 1.39
PCDHB12-203ENST00000624949 KANSL2Q9H9L4 492 aa23.71■■□□□ 1.39
PCDHB12-203ENST00000624949 FOSBP53539 338 aa23.7■■□□□ 1.38
PCDHB12-203ENST00000624949 ICA1Q05084 483 aa23.7■■□□□ 1.38
PCDHB12-203ENST00000624949 DLK2Q6UY11 383 aa23.7■■□□□ 1.38
PCDHB12-203ENST00000624949 TAF1DQ9H5J8 278 aaPredicted RBP23.7■■□□□ 1.38
PCDHB12-203ENST00000624949 POTECB2RU33 542 aa23.69■■□□□ 1.38
PCDHB12-203ENST00000624949 PLEKHA8P1O95397 391 aa23.69■■□□□ 1.38
PCDHB12-203ENST00000624949 EEF2P13639 858 aaKnown RBP23.69■■□□□ 1.38
PCDHB12-203ENST00000624949 FDPSP14324 419 aaKnown RBP23.69■■□□□ 1.38
PCDHB12-203ENST00000624949 SULF1Q8IWU6 871 aa23.69■■□□□ 1.38
PCDHB12-203ENST00000624949 RBM28Q9NW13 759 aaKnown RBP23.69■■□□□ 1.38
PCDHB12-203ENST00000624949 ORC3Q9UBD5 711 aaPredicted RBP23.69■■□□□ 1.38
PCDHB12-203ENST00000624949 PPP2R3BQ9Y5P8 575 aa23.69■■□□□ 1.38
PCDHB12-203ENST00000624949 SCN4AP35499 1836 aa23.69■■□□□ 1.38
PCDHB12-203ENST00000624949 ADM5C9JUS6 153 aa23.69■■□□□ 1.38
PCDHB12-203ENST00000624949 STX6O43752 255 aa23.69■■□□□ 1.38
PCDHB12-203ENST00000624949 PPP2R5BQ15173 497 aa23.69■■□□□ 1.38
PCDHB12-203ENST00000624949 SLC26A6Q9BXS9 759 aa23.69■■□□□ 1.38
PCDHB12-203ENST00000624949 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.69■■□□□ 1.38
PCDHB12-203ENST00000624949 FZD1Q9UP38 647 aa23.69■■□□□ 1.38
PCDHB12-203ENST00000624949 CAP2P40123 477 aa23.68■■□□□ 1.38
PCDHB12-203ENST00000624949 GSE1Q14687 1217 aa23.68■■□□□ 1.38
PCDHB12-203ENST00000624949 PPP4R3BQ5MIZ7 849 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms