RNA–Protein interactions for RNA: ENST00000624700.3

CDKL5-207, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-207ENST00000624700 NASPP49321 788 aaPredicted RBP6.59□□□□□ -1.35
CDKL5-207ENST00000624700 YARSP54577 528 aaKnown RBP6.59□□□□□ -1.35
CDKL5-207ENST00000624700 SOGA3Q5TF21 947 aa6.59□□□□□ -1.35
CDKL5-207ENST00000624700 GK5Q6ZS86 529 aa6.59□□□□□ -1.35
CDKL5-207ENST00000624700 RBBP8NLQ8NC74 664 aaPredicted RBP6.59□□□□□ -1.35
CDKL5-207ENST00000624700 BCL7CQ8WUZ0 217 aaPredicted RBP6.59□□□□□ -1.35
CDKL5-207ENST00000624700 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.59□□□□□ -1.35
CDKL5-207ENST00000624700 TANGO6Q9C0B7 1094 aa6.59□□□□□ -1.35
CDKL5-207ENST00000624700 DAGLAQ9Y4D2 1042 aa6.59□□□□□ -1.35
CDKL5-207ENST00000624700 DYNC1LI2O43237 492 aaPredicted RBP6.58□□□□□ -1.36
CDKL5-207ENST00000624700 C8AP07357 584 aa6.58□□□□□ -1.36
CDKL5-207ENST00000624700 HCLS1P14317 486 aaPredicted RBP6.58□□□□□ -1.36
CDKL5-207ENST00000624700 CDK8P49336 464 aa6.58□□□□□ -1.36
CDKL5-207ENST00000624700 EIF6P56537 245 aaKnown RBP6.58□□□□□ -1.36
CDKL5-207ENST00000624700 JAG1P78504 1218 aa6.58□□□□□ -1.36
CDKL5-207ENST00000624700 CYP27C1Q4G0S4 372 aa6.58□□□□□ -1.36
CDKL5-207ENST00000624700 INTS3Q68E01 1043 aaKnown RBP6.58□□□□□ -1.36
CDKL5-207ENST00000624700 MRPL41Q8IXM3 137 aaKnown RBP6.58□□□□□ -1.36
CDKL5-207ENST00000624700 STK11IPQ8N1F8 1099 aa6.58□□□□□ -1.36
CDKL5-207ENST00000624700 MFSD2AQ8NA29 543 aa6.58□□□□□ -1.36
CDKL5-207ENST00000624700 SRRTQ9BXP5 876 aaKnown RBP6.58□□□□□ -1.36
CDKL5-207ENST00000624700 ZNRF3Q9ULT6 936 aa6.58□□□□□ -1.36
CDKL5-207ENST00000624700 POLR3KQ9Y2Y1 108 aaPredicted RBP6.58□□□□□ -1.36
CDKL5-207ENST00000624700 GRIN3BO60391 1043 aa6.57□□□□□ -1.36
CDKL5-207ENST00000624700 LRIG2O94898 1065 aa6.57□□□□□ -1.36
CDKL5-207ENST00000624700 CLCQ05315 142 aa6.57□□□□□ -1.36
CDKL5-207ENST00000624700 PLCL1Q15111 1095 aa6.57□□□□□ -1.36
CDKL5-207ENST00000624700 LCE1DQ5T752 114 aa6.57□□□□□ -1.36
CDKL5-207ENST00000624700 FBXW10Q5XX13 1052 aa6.57□□□□□ -1.36
CDKL5-207ENST00000624700 ISL2Q96A47 359 aa6.57□□□□□ -1.36
CDKL5-207ENST00000624700 FOXQ1Q9C009 403 aa6.57□□□□□ -1.36
CDKL5-207ENST00000624700 LGR6Q9HBX8 967 aa6.57□□□□□ -1.36
CDKL5-207ENST00000624700 GMIPQ9P107 970 aa6.57□□□□□ -1.36
CDKL5-207ENST00000624700 REV1Q9UBZ9 1251 aa6.57□□□□□ -1.36
CDKL5-207ENST00000624700 BIN1O00499 593 aa6.56□□□□□ -1.36
CDKL5-207ENST00000624700 GIPRP48546 466 aa6.56□□□□□ -1.36
CDKL5-207ENST00000624700 SLFN12Q8IYM2 578 aa6.56□□□□□ -1.36
CDKL5-207ENST00000624700 MISP3Q96FF7 219 aa6.56□□□□□ -1.36
CDKL5-207ENST00000624700 TMEM87BQ96K49 555 aa6.56□□□□□ -1.36
CDKL5-207ENST00000624700 TM9SF2Q99805 663 aa6.56□□□□□ -1.36
CDKL5-207ENST00000624700 HIRIP3Q9BW71 556 aaPredicted RBP6.56□□□□□ -1.36
CDKL5-207ENST00000624700 SLC22A31A6NKX4 558 aa6.55□□□□□ -1.36
CDKL5-207ENST00000624700 MEIS3P2A8K0S8 358 aa6.55□□□□□ -1.36
CDKL5-207ENST00000624700 PAPLNO95428 1278 aa6.55□□□□□ -1.36
CDKL5-207ENST00000624700 CST3P01034 146 aaPredicted RBP6.55□□□□□ -1.36
CDKL5-207ENST00000624700 NEFMP07197 916 aa6.55□□□□□ -1.36
CDKL5-207ENST00000624700 FGRP09769 529 aa6.55□□□□□ -1.36
CDKL5-207ENST00000624700 NTF4P34130 210 aa6.55□□□□□ -1.36
CDKL5-207ENST00000624700 CCNFP41002 786 aa6.55□□□□□ -1.36
CDKL5-207ENST00000624700 ZNF792Q3KQV3 632 aa6.55□□□□□ -1.36
CDKL5-207ENST00000624700 TNNI3KQ59H18 835 aa6.55□□□□□ -1.36
CDKL5-207ENST00000624700 CDCP2Q5VXM1 449 aa6.55□□□□□ -1.36
CDKL5-207ENST00000624700 ZNF574Q6ZN55 896 aaPredicted RBP6.55□□□□□ -1.36
CDKL5-207ENST00000624700 SPRED2Q7Z698 418 aa6.55□□□□□ -1.36
CDKL5-207ENST00000624700 TAB3Q8N5C8 712 aaPredicted RBP6.55□□□□□ -1.36
CDKL5-207ENST00000624700 TMEM40Q8WWA1 233 aa6.55□□□□□ -1.36
CDKL5-207ENST00000624700 ACSF2Q96CM8 615 aaPredicted RBP6.55□□□□□ -1.36
CDKL5-207ENST00000624700 TJP2Q9UDY2 1190 aa6.55□□□□□ -1.36
CDKL5-207ENST00000624700 CORINQ9Y5Q5 1042 aa6.55□□□□□ -1.36
CDKL5-207ENST00000624700 SLC12A7Q9Y666 1083 aa6.55□□□□□ -1.36
CDKL5-207ENST00000624700 STK10O94804 968 aaKnown RBP6.54□□□□□ -1.36
CDKL5-207ENST00000624700 SLBPQ14493 270 aaKnown RBP eCLIP6.54□□□□□ -1.36
CDKL5-207ENST00000624700 ZNF746Q6NUN9 644 aaPredicted RBP6.54□□□□□ -1.36
CDKL5-207ENST00000624700 MCF2L2Q86YR7 1114 aa6.54□□□□□ -1.36
CDKL5-207ENST00000624700 WFDC3Q8IUB2 231 aa6.54□□□□□ -1.36
CDKL5-207ENST00000624700 FAM13CQ8NE31 585 aa6.54□□□□□ -1.36
CDKL5-207ENST00000624700 UBXN4Q92575 508 aa6.54□□□□□ -1.36
CDKL5-207ENST00000624700 CNNM2Q9H8M5 875 aa6.54□□□□□ -1.36
CDKL5-207ENST00000624700 PPT2Q9UMR5 302 aa6.54□□□□□ -1.36
CDKL5-207ENST00000624700 R3HCC1Q9Y3T6 440 aaKnown RBP6.54□□□□□ -1.36
CDKL5-207ENST00000624700 FAM87AP0C7U9 286 aa6.53□□□□□ -1.36
CDKL5-207ENST00000624700 CHMP4BP1P59074 171 aa6.53□□□□□ -1.36
CDKL5-207ENST00000624700 RBL2Q08999 1139 aa6.53□□□□□ -1.36
CDKL5-207ENST00000624700 BNIP3Q12983 259 aa6.53□□□□□ -1.36
CDKL5-207ENST00000624700 NLRC3Q7RTR2 1065 aa6.53□□□□□ -1.36
CDKL5-207ENST00000624700 C19orf47Q8N9M1 422 aaKnown RBP6.53□□□□□ -1.36
CDKL5-207ENST00000624700 NETO1Q8TDF5 533 aa6.53□□□□□ -1.36
CDKL5-207ENST00000624700 SHDQ96IW2 340 aa6.53□□□□□ -1.36
CDKL5-207ENST00000624700 COX4I2Q96KJ9 171 aa6.53□□□□□ -1.36
CDKL5-207ENST00000624700 DHRS1Q96LJ7 313 aa6.53□□□□□ -1.36
CDKL5-207ENST00000624700 CCDC74BQ96LY2 380 aa6.53□□□□□ -1.36
CDKL5-207ENST00000624700 PPP1R1BQ9UD71 204 aaPredicted RBP6.53□□□□□ -1.36
CDKL5-207ENST00000624700 NME1P15531 152 aaKnown RBP6.52□□□□□ -1.37
CDKL5-207ENST00000624700 RAG1P15918 1043 aa6.52□□□□□ -1.37
CDKL5-207ENST00000624700 CYP7A1P22680 504 aa6.52□□□□□ -1.37
CDKL5-207ENST00000624700 CDK5R2Q13319 367 aa6.52□□□□□ -1.37
CDKL5-207ENST00000624700 ARMCX6Q7L4S7 300 aa6.52□□□□□ -1.37
CDKL5-207ENST00000624700 PLD6Q8N2A8 252 aaKnown RBP6.52□□□□□ -1.37
CDKL5-207ENST00000624700 ATG4CQ96DT6 458 aa6.52□□□□□ -1.37
CDKL5-207ENST00000624700 KRTAP4-7Q9BYR0 210 aa6.52□□□□□ -1.37
CDKL5-207ENST00000624700 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.52□□□□□ -1.37
CDKL5-207ENST00000624700 PRDM10Q9NQV6 1147 aa6.52□□□□□ -1.37
CDKL5-207ENST00000624700 PRKAG3Q9UGI9 489 aa6.52□□□□□ -1.37
CDKL5-207ENST00000624700 KLHL3Q9UH77 587 aa6.52□□□□□ -1.37
CDKL5-207ENST00000624700 CHURC1-FNTBB4DL54 471 aa6.51□□□□□ -1.37
CDKL5-207ENST00000624700 TNFRSF10CO14798 259 aa6.51□□□□□ -1.37
CDKL5-207ENST00000624700 RGS13O14921 159 aa6.51□□□□□ -1.37
CDKL5-207ENST00000624700 FUT4P22083 530 aa6.51□□□□□ -1.37
CDKL5-207ENST00000624700 GBP1P32455 592 aa6.51□□□□□ -1.37
CDKL5-207ENST00000624700 GTF2F1P35269 517 aaKnown RBP eCLIP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms