RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 PDE4BQ07343 736 aa9.53□□□□□ -0.88
SND1-IT1-201ENST00000623342 KANK3Q6NY19 840 aa9.53□□□□□ -0.88
SND1-IT1-201ENST00000623342 CTCFLQ8NI51 663 aaPredicted RBP9.53□□□□□ -0.88
SND1-IT1-201ENST00000623342 IRS2Q9Y4H2 1338 aa9.53□□□□□ -0.88
SND1-IT1-201ENST00000623342 NPHP1O15259 732 aa9.53□□□□□ -0.88
SND1-IT1-201ENST00000623342 FOXN1O15353 648 aa9.53□□□□□ -0.88
SND1-IT1-201ENST00000623342 IGSF3O75054 1194 aa9.53□□□□□ -0.88
SND1-IT1-201ENST00000623342 ATP1A3P13637 1013 aa9.53□□□□□ -0.88
SND1-IT1-201ENST00000623342 NT5DC1Q5TFE4 455 aa9.53□□□□□ -0.88
SND1-IT1-201ENST00000623342 TXNRD3Q86VQ6 643 aa9.53□□□□□ -0.88
SND1-IT1-201ENST00000623342 DZIP1Q86YF9 867 aaKnown RBP9.53□□□□□ -0.88
SND1-IT1-201ENST00000623342 TSC1Q92574 1164 aa9.53□□□□□ -0.88
SND1-IT1-201ENST00000623342 CSRNP2Q9H175 543 aa9.53□□□□□ -0.88
SND1-IT1-201ENST00000623342 SERTAD1Q9UHV2 236 aa9.53□□□□□ -0.88
SND1-IT1-201ENST00000623342 MAN1B1Q9UKM7 699 aa9.53□□□□□ -0.88
SND1-IT1-201ENST00000623342 CCDC88AQ3V6T2 1871 aa9.52□□□□□ -0.88
SND1-IT1-201ENST00000623342 SBF2Q86WG5 1849 aa9.52□□□□□ -0.88
SND1-IT1-201ENST00000623342 AFF2P51816 1311 aa9.52□□□□□ -0.89
SND1-IT1-201ENST00000623342 CNTNAP5Q8WYK1 1306 aa9.52□□□□□ -0.89
SND1-IT1-201ENST00000623342 hCG_1642624A0A1W2PR95 340 aa9.52□□□□□ -0.89
SND1-IT1-201ENST00000623342 USP27XA6NNY8 438 aa9.52□□□□□ -0.89
SND1-IT1-201ENST00000623342 CTIFO43310 598 aaKnown RBP9.52□□□□□ -0.89
SND1-IT1-201ENST00000623342 BMP15O95972 392 aa9.52□□□□□ -0.89
SND1-IT1-201ENST00000623342 SERPINC1P01008 464 aa9.52□□□□□ -0.89
SND1-IT1-201ENST00000623342 CYP2D6P10635 497 aa9.52□□□□□ -0.89
SND1-IT1-201ENST00000623342 BMP6P22004 513 aa9.52□□□□□ -0.89
SND1-IT1-201ENST00000623342 SFPQP23246 707 aaKnown RBP eCLIP9.52□□□□□ -0.89
SND1-IT1-201ENST00000623342 UBASH3AP57075 661 aa9.52□□□□□ -0.89
SND1-IT1-201ENST00000623342 EVX2Q03828 476 aa9.52□□□□□ -0.89
SND1-IT1-201ENST00000623342 FAM47AQ5JRC9 791 aa9.52□□□□□ -0.89
SND1-IT1-201ENST00000623342 CEP135Q66GS9 1140 aa9.52□□□□□ -0.89
SND1-IT1-201ENST00000623342 ARMCX5Q6P1M9 558 aa9.52□□□□□ -0.89
SND1-IT1-201ENST00000623342 CCAR2Q8N163 923 aaKnown RBP9.52□□□□□ -0.89
SND1-IT1-201ENST00000623342 SMARCE1Q969G3 411 aa9.52□□□□□ -0.89
SND1-IT1-201ENST00000623342 DACH1Q9UI36 760 aa9.52□□□□□ -0.89
SND1-IT1-201ENST00000623342 KIAA1551Q9HCM1 1747 aa9.52□□□□□ -0.89
SND1-IT1-201ENST00000623342 FAM205CA6NFA0 338 aa9.51□□□□□ -0.89
SND1-IT1-201ENST00000623342 ACTN4O43707 911 aaKnown RBP9.51□□□□□ -0.89
SND1-IT1-201ENST00000623342 NRDCO43847 1150 aa9.51□□□□□ -0.89
SND1-IT1-201ENST00000623342 NMT2O60551 498 aa9.51□□□□□ -0.89
SND1-IT1-201ENST00000623342 RFC4P35249 363 aa9.51□□□□□ -0.89
SND1-IT1-201ENST00000623342 SARSP49591 514 aaKnown RBP9.51□□□□□ -0.89
SND1-IT1-201ENST00000623342 NT5C2P49902 561 aa9.51□□□□□ -0.89
SND1-IT1-201ENST00000623342 PTPN14Q15678 1187 aa9.51□□□□□ -0.89
SND1-IT1-201ENST00000623342 EARS2Q5JPH6 523 aaKnown RBP9.51□□□□□ -0.89
SND1-IT1-201ENST00000623342 NYAP1Q6ZVC0 841 aa9.51□□□□□ -0.89
SND1-IT1-201ENST00000623342 ZNF710Q8N1W2 664 aa9.51□□□□□ -0.89
SND1-IT1-201ENST00000623342 SRBD1Q8N5C6 995 aaKnown RBP9.51□□□□□ -0.89
SND1-IT1-201ENST00000623342 TRIML1Q8N9V2 468 aa9.51□□□□□ -0.89
SND1-IT1-201ENST00000623342 MLKLQ8NB16 471 aa9.51□□□□□ -0.89
SND1-IT1-201ENST00000623342 LEMD3Q9Y2U8 911 aa9.51□□□□□ -0.89
SND1-IT1-201ENST00000623342 TNRC6CQ9HCJ0 1690 aaKnown RBP9.51□□□□□ -0.89
SND1-IT1-201ENST00000623342 THSD7AQ9UPZ6 1657 aa9.51□□□□□ -0.89
SND1-IT1-201ENST00000623342 TSPY2A6NKD2 308 aa9.51□□□□□ -0.89
SND1-IT1-201ENST00000623342 PRR29P0C7W0 189 aa9.51□□□□□ -0.89
SND1-IT1-201ENST00000623342 GRAPQ13588 217 aa9.51□□□□□ -0.89
SND1-IT1-201ENST00000623342 MORC3Q14149 939 aa9.51□□□□□ -0.89
SND1-IT1-201ENST00000623342 TRAPPC3LQ5T215 181 aa9.51□□□□□ -0.89
SND1-IT1-201ENST00000623342 PDILTQ8N807 584 aa9.51□□□□□ -0.89
SND1-IT1-201ENST00000623342 WDR66Q8TBY9 1149 aa9.51□□□□□ -0.89
SND1-IT1-201ENST00000623342 GRAPLQ8TC17 118 aaPredicted RBP9.51□□□□□ -0.89
SND1-IT1-201ENST00000623342 TNFRSF25Q93038 417 aa9.51□□□□□ -0.89
SND1-IT1-201ENST00000623342 FERMT2Q96AC1 680 aa9.51□□□□□ -0.89
SND1-IT1-201ENST00000623342 CCDC34Q96HJ3 373 aa9.51□□□□□ -0.89
SND1-IT1-201ENST00000623342 FANCLQ9NW38 375 aa9.51□□□□□ -0.89
SND1-IT1-201ENST00000623342 MCM9Q9NXL9 1143 aa9.51□□□□□ -0.89
SND1-IT1-201ENST00000623342 ANKIB1Q9P2G1 1089 aa9.51□□□□□ -0.89
SND1-IT1-201ENST00000623342 JAG2Q9Y219 1238 aa9.51□□□□□ -0.89
SND1-IT1-201ENST00000623342 LDHBP07195 334 aaKnown RBP9.5□□□□□ -0.89
SND1-IT1-201ENST00000623342 KCNJ6P48051 423 aa9.5□□□□□ -0.89
SND1-IT1-201ENST00000623342 NPY5RQ15761 445 aa9.5□□□□□ -0.89
SND1-IT1-201ENST00000623342 CFAP100Q494V2 611 aa9.5□□□□□ -0.89
SND1-IT1-201ENST00000623342 USP49Q70CQ1 688 aa9.5□□□□□ -0.89
SND1-IT1-201ENST00000623342 CCDC112Q8NEF3 446 aa9.5□□□□□ -0.89
SND1-IT1-201ENST00000623342 GJD4Q96KN9 370 aaPredicted RBP9.5□□□□□ -0.89
SND1-IT1-201ENST00000623342 TRMT1Q9NXH9 659 aaKnown RBP9.5□□□□□ -0.89
SND1-IT1-201ENST00000623342 TAF1LQ8IZX4 1826 aa9.5□□□□□ -0.89
SND1-IT1-201ENST00000623342 LY75O60449 1722 aa9.5□□□□□ -0.89
SND1-IT1-201ENST00000623342 USP17L8P0C7I0 530 aa9.5□□□□□ -0.89
SND1-IT1-201ENST00000623342 SCG2P13521 617 aa9.5□□□□□ -0.89
SND1-IT1-201ENST00000623342 KIF5BP33176 963 aa9.5□□□□□ -0.89
SND1-IT1-201ENST00000623342 USP5P45974 858 aa9.5□□□□□ -0.89
SND1-IT1-201ENST00000623342 GSTO1P78417 241 aa9.5□□□□□ -0.89
SND1-IT1-201ENST00000623342 TTC38Q5R3I4 469 aa9.5□□□□□ -0.89
SND1-IT1-201ENST00000623342 MEX3CQ5U5Q3 659 aaKnown RBP9.5□□□□□ -0.89
SND1-IT1-201ENST00000623342 C12orf60Q5U649 245 aa9.5□□□□□ -0.89
SND1-IT1-201ENST00000623342 VSTM4Q8IW00 320 aa9.5□□□□□ -0.89
SND1-IT1-201ENST00000623342 SPATA20Q8TB22 786 aa9.5□□□□□ -0.89
SND1-IT1-201ENST00000623342 DPF2Q92785 391 aa9.5□□□□□ -0.89
SND1-IT1-201ENST00000623342 LRRC4BQ9NT99 713 aa9.5□□□□□ -0.89
SND1-IT1-201ENST00000623342 BRWD3Q6RI45 1802 aa9.5□□□□□ -0.89
SND1-IT1-201ENST00000623342 PSDA5PKW4 1024 aaPredicted RBP9.49□□□□□ -0.89
SND1-IT1-201ENST00000623342 KIF2AO00139 706 aaPredicted RBP9.49□□□□□ -0.89
SND1-IT1-201ENST00000623342 NFIXQ14938 502 aa9.49□□□□□ -0.89
SND1-IT1-201ENST00000623342 PFKFB3Q16875 520 aaPredicted RBP9.49□□□□□ -0.89
SND1-IT1-201ENST00000623342 GLIPR1L2Q4G1C9 344 aa9.49□□□□□ -0.89
SND1-IT1-201ENST00000623342 RCSD1Q6JBY9 416 aa9.49□□□□□ -0.89
SND1-IT1-201ENST00000623342 GRAMD1CQ8IYS0 662 aa9.49□□□□□ -0.89
SND1-IT1-201ENST00000623342 ENOX1Q8TC92 643 aaKnown RBP9.49□□□□□ -0.89
SND1-IT1-201ENST00000623342 ZNF592Q92610 1267 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms