RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 FOXP4Q8IVH2 680 aaPredicted RBP13.39□□□□□ -0.27
LINC00963-214ENST00000622680 CCAR1Q8IX12 1150 aaKnown RBP13.39□□□□□ -0.27
LINC00963-214ENST00000622680 MAGEB6Q8N7X4 407 aa13.39□□□□□ -0.27
LINC00963-214ENST00000622680 USP6NLQ92738 828 aa13.39□□□□□ -0.27
LINC00963-214ENST00000622680 FEZ1Q99689 392 aa13.39□□□□□ -0.27
LINC00963-214ENST00000622680 APBA2Q99767 749 aa13.39□□□□□ -0.27
LINC00963-214ENST00000622680 GBF1Q92538 1859 aa13.38□□□□□ -0.27
LINC00963-214ENST00000622680 CCER2I3L3R5 266 aa13.38□□□□□ -0.27
LINC00963-214ENST00000622680 RLBP1P12271 317 aa13.38□□□□□ -0.27
LINC00963-214ENST00000622680 XRCC5P13010 732 aaKnown RBP13.38□□□□□ -0.27
LINC00963-214ENST00000622680 BMP8BP34820 402 aa13.38□□□□□ -0.27
LINC00963-214ENST00000622680 RGS2P41220 211 aa13.38□□□□□ -0.27
LINC00963-214ENST00000622680 USP5P45974 858 aa13.38□□□□□ -0.27
LINC00963-214ENST00000622680 MORN1Q5T089 497 aa13.38□□□□□ -0.27
LINC00963-214ENST00000622680 USP17L2Q6R6M4 530 aa13.38□□□□□ -0.27
LINC00963-214ENST00000622680 PLEKHH3Q7Z736 793 aa13.38□□□□□ -0.27
LINC00963-214ENST00000622680 ITPRIPQ8IWB1 547 aa13.38□□□□□ -0.27
LINC00963-214ENST00000622680 SLC17A8Q8NDX2 589 aa13.38□□□□□ -0.27
LINC00963-214ENST00000622680 EAF2Q96CJ1 260 aaPredicted RBP13.38□□□□□ -0.27
LINC00963-214ENST00000622680 ZNF512BQ96KM6 892 aaPredicted RBP13.38□□□□□ -0.27
LINC00963-214ENST00000622680 ANTXR1Q9H6X2 564 aa13.38□□□□□ -0.27
LINC00963-214ENST00000622680 CWC22Q9HCG8 908 aaKnown RBP13.38□□□□□ -0.27
LINC00963-214ENST00000622680 COL6A1P12109 1028 aa13.37□□□□□ -0.27
LINC00963-214ENST00000622680 EVX2Q03828 476 aa13.37□□□□□ -0.27
LINC00963-214ENST00000622680 RAB3GAP1Q15042 981 aa13.37□□□□□ -0.27
LINC00963-214ENST00000622680 LRRC26Q2I0M4 334 aa13.37□□□□□ -0.27
LINC00963-214ENST00000622680 WDR78Q5VTH9 848 aa13.37□□□□□ -0.27
LINC00963-214ENST00000622680 ACER1Q8TDN7 264 aa13.37□□□□□ -0.27
LINC00963-214ENST00000622680 GINM1Q9NU53 330 aa13.37□□□□□ -0.27
LINC00963-214ENST00000622680 FLRT1Q9NZU1 646 aa13.37□□□□□ -0.27
LINC00963-214ENST00000622680 VCANP13611 3396 aa13.37□□□□□ -0.27
LINC00963-214ENST00000622680 VCAM1P19320 739 aa13.36□□□□□ -0.27
LINC00963-214ENST00000622680 LHX8Q68G74 356 aa13.36□□□□□ -0.27
LINC00963-214ENST00000622680 TATDN1Q6P1N9 297 aa13.36□□□□□ -0.27
LINC00963-214ENST00000622680 FTSJ3Q8IY81 847 aaKnown RBP13.36□□□□□ -0.27
LINC00963-214ENST00000622680 TDHQ8IZJ6 230 aa13.36□□□□□ -0.27
LINC00963-214ENST00000622680 DEFB123Q8N688 67 aa13.36□□□□□ -0.27
LINC00963-214ENST00000622680 C12orf42Q96LP6 360 aa13.36□□□□□ -0.27
LINC00963-214ENST00000622680 SERPINB13Q9UIV8 391 aa13.36□□□□□ -0.27
LINC00963-214ENST00000622680 NOP58Q9Y2X3 529 aaKnown RBP13.36□□□□□ -0.27
LINC00963-214ENST00000622680 USP17L15C9J2P7 530 aa13.35□□□□□ -0.27
LINC00963-214ENST00000622680 USP17L13C9JLJ4 530 aa13.35□□□□□ -0.27
LINC00963-214ENST00000622680 USP17L11C9JVI0 530 aa13.35□□□□□ -0.27
LINC00963-214ENST00000622680 USP17L18D6R9N7 530 aa13.35□□□□□ -0.27
LINC00963-214ENST00000622680 USP17L22D6RA61 530 aa13.35□□□□□ -0.27
LINC00963-214ENST00000622680 USP17L17D6RBQ6 530 aa13.35□□□□□ -0.27
LINC00963-214ENST00000622680 USP17L19D6RCP7 530 aa13.35□□□□□ -0.27
LINC00963-214ENST00000622680 USP17L20D6RJB6 530 aa13.35□□□□□ -0.27
LINC00963-214ENST00000622680 DLL1O00548 723 aa13.35□□□□□ -0.27
LINC00963-214ENST00000622680 SHMT1P34896 483 aa13.35□□□□□ -0.27
LINC00963-214ENST00000622680 MDM2Q00987 491 aaPredicted RBP13.35□□□□□ -0.27
LINC00963-214ENST00000622680 USP17L24Q0WX57 530 aa13.35□□□□□ -0.27
LINC00963-214ENST00000622680 MAP2K5Q13163 448 aa13.35□□□□□ -0.27
LINC00963-214ENST00000622680 ABCB5Q2M3G0 1257 aa13.35□□□□□ -0.27
LINC00963-214ENST00000622680 TRMT44Q8IYL2 757 aaKnown RBP13.35□□□□□ -0.27
LINC00963-214ENST00000622680 GTF3C2Q8WUA4 911 aaPredicted RBP13.35□□□□□ -0.27
LINC00963-214ENST00000622680 UBE2OQ9C0C9 1292 aaKnown RBP13.35□□□□□ -0.27
LINC00963-214ENST00000622680 EHD4Q9H223 541 aa13.35□□□□□ -0.27
LINC00963-214ENST00000622680 BTBD7Q9P203 1132 aa13.35□□□□□ -0.27
LINC00963-214ENST00000622680 EXOC6BQ9Y2D4 811 aa13.35□□□□□ -0.27
LINC00963-214ENST00000622680 RABGAP1Q9Y3P9 1069 aa13.35□□□□□ -0.27
LINC00963-214ENST00000622680 SPDYE16A6NNV3 312 aaPredicted RBP13.34□□□□□ -0.27
LINC00963-214ENST00000622680 GUCY1A2P33402 732 aa13.34□□□□□ -0.27
LINC00963-214ENST00000622680 PLCD1P51178 756 aa13.34□□□□□ -0.27
LINC00963-214ENST00000622680 CERKLQ49MI3 558 aaPredicted RBP13.34□□□□□ -0.27
LINC00963-214ENST00000622680 CATSPERGQ6ZRH7 1159 aa13.34□□□□□ -0.27
LINC00963-214ENST00000622680 AACSQ86V21 672 aa13.34□□□□□ -0.27
LINC00963-214ENST00000622680 KIAA1683Q9H0B3 1180 aa13.34□□□□□ -0.27
LINC00963-214ENST00000622680 RPAP3Q9H6T3 665 aaPredicted RBP13.34□□□□□ -0.27
LINC00963-214ENST00000622680 USP14P54578 494 aa13.33□□□□□ -0.28
LINC00963-214ENST00000622680 CCNA1P78396 465 aa13.33□□□□□ -0.28
LINC00963-214ENST00000622680 MAP3K12Q12852 859 aa13.33□□□□□ -0.28
LINC00963-214ENST00000622680 SEPT2Q15019 361 aa13.33□□□□□ -0.28
LINC00963-214ENST00000622680 LRIT3Q3SXY7 679 aa13.33□□□□□ -0.28
LINC00963-214ENST00000622680 CEP85Q6P2H3 762 aa13.33□□□□□ -0.28
LINC00963-214ENST00000622680 NPLOC4Q8TAT6 608 aa13.33□□□□□ -0.28
LINC00963-214ENST00000622680 EDC3Q96F86 508 aaKnown RBP13.33□□□□□ -0.28
LINC00963-214ENST00000622680 RIOK1Q9BRS2 568 aaKnown RBP13.33□□□□□ -0.28
LINC00963-214ENST00000622680 SLC15A5A6NIM6 579 aa13.32□□□□□ -0.28
LINC00963-214ENST00000622680 PTPREP23469 700 aa13.32□□□□□ -0.28
LINC00963-214ENST00000622680 CNGA1P29973 690 aa13.32□□□□□ -0.28
LINC00963-214ENST00000622680 CYP2C19P33261 490 aa13.32□□□□□ -0.28
LINC00963-214ENST00000622680 GRB14Q14449 540 aa13.32□□□□□ -0.28
LINC00963-214ENST00000622680 MFSD14CQ5VZR4 134 aa13.32□□□□□ -0.28
LINC00963-214ENST00000622680 CLEC10AQ8IUN9 316 aa13.32□□□□□ -0.28
LINC00963-214ENST00000622680 TRPV1Q8NER1 839 aa13.32□□□□□ -0.28
LINC00963-214ENST00000622680 IL1RAPL2Q9NP60 686 aa13.32□□□□□ -0.28
LINC00963-214ENST00000622680 IVNS1ABPQ9Y6Y0 642 aa13.32□□□□□ -0.28
LINC00963-214ENST00000622680 MAGEB6P1A0A0J9YX57 407 aa13.31□□□□□ -0.28
LINC00963-214ENST00000622680 MPHOSPH10O00566 681 aaKnown RBP13.31□□□□□ -0.28
LINC00963-214ENST00000622680 IGSF3O75054 1194 aa13.31□□□□□ -0.28
LINC00963-214ENST00000622680 GLRX3O76003 335 aaKnown RBP13.31□□□□□ -0.28
LINC00963-214ENST00000622680 POLR3DP05423 398 aaPredicted RBP13.31□□□□□ -0.28
LINC00963-214ENST00000622680 PDE6AP16499 860 aa13.31□□□□□ -0.28
LINC00963-214ENST00000622680 ATN1P54259 1190 aaPredicted RBP13.31□□□□□ -0.28
LINC00963-214ENST00000622680 GPR153Q6NV75 609 aa13.31□□□□□ -0.28
LINC00963-214ENST00000622680 LBX2Q6XYB7 198 aa13.31□□□□□ -0.28
LINC00963-214ENST00000622680 TTC6Q86TZ1 520 aa13.31□□□□□ -0.28
LINC00963-214ENST00000622680 CERS3Q8IU89 383 aa13.31□□□□□ -0.28
LINC00963-214ENST00000622680 SLC44A5Q8NCS7 719 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms